FC925852

Overview
NameFC925852
Unique NameFC925852
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length739
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925852 vs. ExPASy Swiss-Prot
Match: VTC4_ARATH (Inositol-phosphate phosphatase OS=Arabidopsis thaliana GN=VTC4 PE=1 SV=1)

HSP 1 Score: 397.127 bits (1019), Expect = 5.098e-110
Identity = 187/230 (81.30%), Postives = 212/230 (92.17%), Query Frame = 2
Query:   50 MAQNDSLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDVAAGVVIVE 739
            MA NDSL +FL  A+DAAK+AG+IIR GFY+TK+VEHKGQVDLVTETDK CE+L+FNHLKQ FP HKFIGEETTAA G TELTDEPTWIVDPLDGTTNFVHGFPFVC+SIGLTIGK+P+VGVVYNPIM+ELFTGV G+GAF NGK IKVS+Q+EL+ +LL TEAGTKRDK TLD +TNRINSLL KVRSLRMSGSCAL+LCG+ACGR+D+FYELGFGGPWD+AAG+VIV+
Sbjct:    1 MADNDSLDQFLAAAIDAAKKAGQIIRKGFYETKHVEHKGQVDLVTETDKGCEELVFNHLKQLFPNHKFIGEETTAAFGVTELTDEPTWIVDPLDGTTNFVHGFPFVCVSIGLTIGKVPVVGVVYNPIMEELFTGVQGKGAFLNGKRIKVSAQSELLTALLVTEAGTKRDKATLDDTTNRINSLLTKVRSLRMSGSCALDLCGVACGRVDIFYELGFGGPWDIAAGIVIVK 230          
BLAST of FC925852 vs. ExPASy Swiss-Prot
Match: IMP3_SOLLC (Inositol monophosphatase 3 OS=Solanum lycopersicum GN=IMP3 PE=2 SV=1)

HSP 1 Score: 396.356 bits (1017), Expect = 8.695e-110
Identity = 191/230 (83.04%), Postives = 209/230 (90.87%), Query Frame = 2
Query:   50 MAQNDSLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDVAAGVVIVE 739
            MAQN S+ +FLD AV+AAK+AGEIIR GFY+TK+VEHKG VDLVTETDKACED IFNHLKQ+FP+HKFIGEETTAACG  ELTDEPTWIVDPLDGTTNFVHGFPFVC+SIGLTI K P VGVVYNPI+DELFTG+ G+GAF NGKPIKVSSQ+ELVK+LLATEAGT RDK  +DA+T RINSLLFKVRSLRM GSCALNLCG+ACGRLDLFYEL FGGPWDVA G VIV+
Sbjct:    1 MAQNGSVEQFLDVAVEAAKKAGEIIREGFYKTKHVEHKGMVDLVTETDKACEDFIFNHLKQRFPSHKFIGEETTAACGNFELTDEPTWIVDPLDGTTNFVHGFPFVCVSIGLTIEKKPTVGVVYNPIIDELFTGIDGKGAFLNGKPIKVSSQSELVKALLATEAGTNRDKLVVDATTGRINSLLFKVRSLRMCGSCALNLCGVACGRLDLFYELEFGGPWDVAGGAVIVK 230          
BLAST of FC925852 vs. ExPASy Swiss-Prot
Match: IMPP_MESCR (Inositol monophosphatase OS=Mesembryanthemum crystallinum GN=IMP1 PE=2 SV=1)

HSP 1 Score: 379.793 bits (974), Expect = 8.422e-105
Identity = 185/230 (80.43%), Postives = 201/230 (87.39%), Query Frame = 2
Query:   50 MAQNDSLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDVAAGVVIVE 739
            MA N  L+ FL TAVDAAKRAGE+IR GFY  KNVEHKGQVDLVTETDK+CED+IFN LKQQ+P HKFIGEETTAA GATELTDEPTWIVDPLDGTTNFVHGFPFVC+SIGLTIGK+P VGVVYNPIM+ELFTGV  QGAF NG PI VSS+ ELV  LL TE GTKRDK T+DA+TNRIN LLFKVRS+RM+GSCAL+LCGIACGR DL YE G+GG WDV AG+VIVE
Sbjct:    1 MAANVPLSDFLATAVDAAKRAGEVIRKGFYVKKNVEHKGQVDLVTETDKSCEDIIFNCLKQQYPNHKFIGEETTAAYGATELTDEPTWIVDPLDGTTNFVHGFPFVCVSIGLTIGKVPTVGVVYNPIMNELFTGVRRQGAFLNGVPIHVSSKDELVNCLLVTEVGTKRDKSTVDATTNRINGLLFKVRSIRMAGSCALDLCGIACGRADLMYENGYGGAWDVTAGIVIVE 230          
BLAST of FC925852 vs. ExPASy Swiss-Prot
Match: IMP1_SOLLC (Inositol monophosphatase 1 OS=Solanum lycopersicum GN=IMP1 PE=2 SV=1)

HSP 1 Score: 372.474 bits (955), Expect = 1.345e-102
Identity = 178/230 (77.39%), Postives = 205/230 (89.13%), Query Frame = 2
Query:   50 MAQNDSLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDVAAGVVIVE 739
            MA+N SL +FL  AVDAAKRAGEIIR GF++TK+V HKGQVDLVTETDKACEDLIFNHLKQ FP+HKFIGEET+AA G  +LTDEPTWIVDP+DGTTNFVHGFP VC+SIGLTIGKIP VGVVY+PI+DELFTG++G+GA+ NGKPIKVSSQ+ELVKSLL TE GT RD  T++ +T RIN+LLFKVRSLRM GSCAL+LC +ACGRL+LFY +G+GGPWDVA G VIV+
Sbjct:    1 MARNGSLEEFLGVAVDAAKRAGEIIRKGFHETKHVVHKGQVDLVTETDKACEDLIFNHLKQHFPSHKFIGEETSAATGDFDLTDEPTWIVDPVDGTTNFVHGFPSVCVSIGLTIGKIPTVGVVYDPIIDELFTGINGKGAYLNGKPIKVSSQSELVKSLLGTEVGTTRDNLTVETTTRRINNLLFKVRSLRMCGSCALDLCWVACGRLELFYLIGYGGPWDVAGGAVIVK 230          
BLAST of FC925852 vs. ExPASy Swiss-Prot
Match: IMP2_SOLLC (Inositol monophosphatase 2 OS=Solanum lycopersicum GN=IMP2 PE=2 SV=1)

HSP 1 Score: 361.303 bits (926), Expect = 3.100e-99
Identity = 171/224 (76.34%), Postives = 202/224 (90.18%), Query Frame = 2
Query:   68 LAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAAC-GATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDVAAGVVIV 736
            + +F+D A++AAK+AGEIIR+GFY++K++EHKG VDLVTETDKACE LIFNHLKQ FP+HKFIGEETTAA  G  ELTDEPTWIVDPLDGTTNFVHGFPFVC+SIGLTI K P+VGVVYNPI+DELFT ++G+GAF NGK I+VSS+++LVK+L+ATE GT RDK  +DA+T RIN ++FKVRSLRMSGSCALNLCG+ACGRLDLFYE+ FGGPWDVAAG +IV
Sbjct:    1 MEEFVDVAIEAAKKAGEIIRHGFYKSKHIEHKGVVDLVTETDKACEVLIFNHLKQCFPSHKFIGEETTAAASGNFELTDEPTWIVDPLDGTTNFVHGFPFVCVSIGLTIEKKPVVGVVYNPIIDELFTAIYGRGAFLNGKSIRVSSESQLVKALVATEVGTNRDKAIVDATTGRINRVIFKVRSLRMSGSCALNLCGVACGRLDLFYEIEFGGPWDVAAGALIV 224          
BLAST of FC925852 vs. ExPASy Swiss-Prot
Match: IMPA1_BOVIN (Inositol monophosphatase 1 OS=Bos taurus GN=IMPA1 PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 8.560e-49
Identity = 100/229 (43.67%), Postives = 145/229 (63.32%), Query Frame = 2
Query:   62 DSLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQ-VDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLL-FKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDVA-AGVVIVE 739
            D   + +D AV  A +AGE++R       N+  K    DLVT TD+  E ++   +K+++P+H FIGEE+ AA   + LTD PTWI+DP+DGTTNFVHGFPFV +SIG  + K    G+VY+ + D+++TG  G+GAF NG+ ++VS Q ++ KSLL TE G+ R   T+    + I  LL   +  +R  G+ ALN+C +A G  D +YE+G    WDVA AG+++ E
Sbjct:    3 DPWQECMDYAVTLAGQAGEVVREALKNEMNIMVKSSPADLVTATDQKVEKMLITSIKEKYPSHSFIGEESVAAGEKSILTDNPTWIIDPIDGTTNFVHGFPFVAVSIGFVVNKKMEFGIVYSCLEDKMYTGRKGKGAFCNGQKLQVSHQEDITKSLLVTELGSSRTPETVRIILSNIERLLCLPIHGIRGVGTAALNMCLVAAGAADAYYEMGI-HCWDVAGAGIIVTE 230          
BLAST of FC925852 vs. ExPASy Swiss-Prot
Match: IMPA1_DICDI (Inositol monophosphatase OS=Dictyostelium discoideum GN=impa1 PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 3.253e-48
Identity = 102/229 (44.54%), Postives = 146/229 (63.76%), Query Frame = 2
Query:   56 QNDSLAKFLDTAVDAAKRAGE-IIRNGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKR-DKPTLDASTNRINSLLFKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDVAAGVVIV 736
            +N +L ++L +AVD  K  G  I++N   ++K +E+KG +DLVT+TDKA E+ I   L  ++P  K +GEE+T   G     +EPTW++DP+DGTTNFVH FP  C+SI L+I K  +V  +Y P++DELFT   G GAF NG+ I VSS   L +S+++T  G  R DK      TN  N L   V++LR SG+ A  +  ++CGR+D FYE G   PWD+AA  +++
Sbjct:    2 ENITLDQYLQSAVDVVKEIGPMILKNYNSRSKQIEYKGAIDLVTDTDKAVEEHIIKTLTTKYPHTKILGEESTKD-GIYNWGNEPTWVIDPIDGTTNFVHRFPLFCVSIALSINKEIVVACLYAPVLDELFTATKGGGAFLNGESISVSSVEHLSQSIISTNVGYDRSDKGIEFMLTNFKNILKDNVQALRFSGTAAWEMASVSCGRVDSFYEWGI-HPWDIAAASLLI 228          
BLAST of FC925852 vs. ExPASy Swiss-Prot
Match: IMPA1_PIG (Inositol monophosphatase 1 OS=Sus scrofa GN=IMPA1 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 9.464e-48
Identity = 99/229 (43.23%), Postives = 146/229 (63.76%), Query Frame = 2
Query:   62 DSLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQ-VDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLL-FKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDVA-AGVVIVE 739
            D   + +D AV  A++AGEI+R       N+  K    DLVT TD+  E ++ + +K+++P+H FIGEE+ AA   + LTD PTWI+DP+DGTTNFVHGFPFV +SIG  + K    GVVY+ + D+++TG  G+GAF +G+ ++VS Q ++  SLL TE G+ R   T+    + +  LL   +  +R  G+ ALN+C +A G  D FYE+G    WD+A AG+++ E
Sbjct:    3 DPWQECMDYAVTLARQAGEIVREALKNEMNIMIKSSPADLVTATDEKVEKMLISSIKEKYPSHSFIGEESVAAGEKSVLTDNPTWIIDPIDGTTNFVHGFPFVAVSIGFVVNKGMEFGVVYSCMEDKMYTGRKGRGAFCDGQKLQVSPQKDVTNSLLVTELGSSRTPETVRIILSNMERLLCIPIHGIRGVGTAALNMCFVAAGVADAFYEMGI-HCWDMAGAGIIVTE 230          
BLAST of FC925852 vs. ExPASy Swiss-Prot
Match: IMPA2_RAT (Inositol monophosphatase 2 OS=Rattus norvegicus GN=Impa2 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.044e-46
Identity = 100/220 (45.45%), Postives = 137/220 (62.27%), Query Frame = 2
Query:   83 DTAVDAAKRAGEIIRNGFYQTKNVEHK-GQVDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLLF-KVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDVAAGVVIV 736
            + AV  A RAG+IIR    + K+V  K    DLVTETD   EDLI + L+++FP+H+FI EE TA+     LT  PTWI+DP+DGT NFVH FP V +SIG  + +    GV+++   + L+TG  GQGAF NG+ ++VS +T+L K+L+ TE G KRD  TL    + +  LL  K   +R+ GS  L LC +A G  D +Y+ G    WD+AA  VI+
Sbjct:   23 EVAVQLALRAGQIIRKALTEEKHVSTKTSAADLVTETDHRVEDLIVSELRKRFPSHRFIAEEATASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVHQELEFGVIHHCTEERLYTGRRGQGAFCNGQRLQVSRETDLAKALVLTEIGPKRDPDTLKVFLSNMERLLHAKAHGVRVIGSSTLALCYLASGAADAYYQFGL-HCWDLAAATVII 241          
BLAST of FC925852 vs. ExPASy Swiss-Prot
Match: IMPA1_RAT (Inositol monophosphatase 1 OS=Rattus norvegicus GN=Impa1 PE=1 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 3.044e-46
Identity = 96/229 (41.92%), Postives = 145/229 (63.32%), Query Frame = 2
Query:   62 DSLAKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKGQ-VDLVTETDKACEDLIFNHLKQQFPTHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIMDELFTGVHGQGAFFNGKPIKVSSQTELVKSLLATEAGTKRDKPTLDASTNRINSLL-FKVRSLRMSGSCALNLCGIACGRLDLFYELGFGGPWDVA-AGVVIVE 739
            D   + +D AV  A++AGE+IR       +V  K    DLVT TD+  E ++ + +K+++P H FIGEE+ A+   T  T++PTWI+DP+DGTTNFVH FPFV +SIG  + K    GVVY+ + D+++TG  G+GAF NG+ ++VS Q ++ KSLL TE G+ R   TL    + +  L    +  +R  G+ A+N+C +A G  D +YE+G    WD+A AG++++E
Sbjct:    3 DPWQECMDYAVILARQAGEMIREALKNKMDVMIKSSPADLVTVTDQKVEKMLMSSIKEKYPYHSFIGEESVASGEKTVFTEQPTWIIDPIDGTTNFVHRFPFVAVSIGFVVNKEMEFGVVYSCVEDKMYTGRKGKGAFCNGQKLRVSQQEDITKSLLVTELGSSRKPETLRIVLSNMERLCSIPIHGIRSVGTAAVNMCLVATGGADAYYEMGI-HCWDMAGAGIIVIE 230          
The following BLAST results are available for this feature:
BLAST of FC925852 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
VTC4_ARATH5.098e-11081.30Inositol-phosphate phosphatase OS=Arabidopsis thal... [more]
IMP3_SOLLC8.695e-11083.04Inositol monophosphatase 3 OS=Solanum lycopersicum... [more]
IMPP_MESCR8.422e-10580.43Inositol monophosphatase OS=Mesembryanthemum cryst... [more]
IMP1_SOLLC1.345e-10277.39Inositol monophosphatase 1 OS=Solanum lycopersicum... [more]
IMP2_SOLLC3.100e-9976.34Inositol monophosphatase 2 OS=Solanum lycopersicum... [more]
IMPA1_BOVIN8.560e-4943.67Inositol monophosphatase 1 OS=Bos taurus GN=IMPA1 ... [more]
IMPA1_DICDI3.253e-4844.54Inositol monophosphatase OS=Dictyostelium discoide... [more]
IMPA1_PIG9.464e-4843.23Inositol monophosphatase 1 OS=Sus scrofa GN=IMPA1 ... [more]
IMPA2_RAT3.044e-4645.45Inositol monophosphatase 2 OS=Rattus norvegicus GN... [more]
IMPA1_RAT3.044e-4641.92Inositol monophosphatase 1 OS=Rattus norvegicus GN... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YL21FM1 TF Citrus clementina cDNA clone KN0AAP11YL21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925852 ID=FC925852; Name=FC925852; organism=Citrus clementina; type=EST; length=739bp
CGTTCTTCTCCTCCTTTTTTTAATCCTGTATAATAAAAAATATACCCATA
TGGCACAAAATGATTCCCTTGCAAAGTTCTTGGACACTGCAGTTGATGCA
GCTAAGAGGGCTGGCGAGATAATCCGTAATGGGTTCTATCAAACCAAAAA
TGTGGAGCATAAAGGCCAGGTGGATTTGGTCACAGAAACTGATAAAGCAT
GTGAGGATCTCATATTTAATCATCTCAAGCAGCAATTTCCCACGCATAAG
TTCATTGGAGAAGAAACTACCGCTGCTTGTGGTGCCACAGAGTTGACCGA
TGAACCCACATGGATTGTCGATCCTCTTGATGGAACAACTAACTTTGTGC
ATGGGTTTCCCTTTGTGTGTATCTCTATCGGTCTTACAATTGGAAAGATT
CCTATTGTCGGGGTTGTCTACAATCCAATAATGGATGAGCTTTTTACTGG
AGTCCATGGACAAGGTGCATTTTTTAATGGAAAACCTATAAAAGTATCAT
CTCAAACTGAACTAGTAAAGTCTCTCCTCGCAACAGAGGCTGGAACAAAA
CGTGATAAGCCAACTCTGGATGCTTCTACAAATAGAATCAATAGCTTGCT
ATTCAAGGTGAGATCCCTTCGGATGAGTGGCTCCTGTGCATTGAATCTTT
GTGGAATTGCATGCGGAAGGCTTGATCTGTTTTATGAACTCGGATTTGGA
GGTCCATGGGATGTGGCAGCTGGTGTTGTGATTGTTGAA
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