FC925863

Overview
NameFC925863
Unique NameFC925863
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC925863 vs. ExPASy Swiss-Prot
Match: UXS1_XENTR (UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis GN=uxs1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.972e-17
Identity = 41/62 (66.13%), Postives = 49/62 (79.03%), Query Frame = 2 
Query:  497 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIKHDVLKPLLL 682
            RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDV++PL +
Sbjct:   91 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYI 152
[Close]
BLAST of FC925863 vs. ExPASy Swiss-Prot
Match: UXS1_RAT (UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.972e-17
Identity = 41/62 (66.13%), Postives = 49/62 (79.03%), Query Frame = 2 
Query:  497 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIKHDVLKPLLL 682
            RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDV++PL +
Sbjct:   90 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYI 151
[Close]
BLAST of FC925863 vs. ExPASy Swiss-Prot
Match: UXS1_PONAB (UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.972e-17
Identity = 41/62 (66.13%), Postives = 49/62 (79.03%), Query Frame = 2 
Query:  497 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIKHDVLKPLLL 682
            RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDV++PL +
Sbjct:   90 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYI 151
[Close]
BLAST of FC925863 vs. ExPASy Swiss-Prot
Match: UXS1_MOUSE (UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.972e-17
Identity = 41/62 (66.13%), Postives = 49/62 (79.03%), Query Frame = 2 
Query:  497 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIKHDVLKPLLL 682
            RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDV++PL +
Sbjct:   90 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYI 151
[Close]
BLAST of FC925863 vs. ExPASy Swiss-Prot
Match: UXS1_HUMAN (UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.972e-17
Identity = 41/62 (66.13%), Postives = 49/62 (79.03%), Query Frame = 2 
Query:  497 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIKHDVLKPLLL 682
            RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDV++PL +
Sbjct:   90 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYI 151
[Close]
BLAST of FC925863 vs. ExPASy Swiss-Prot
Match: UXS1_DANRE (UDP-glucuronic acid decarboxylase 1 OS=Danio rerio GN=uxs1 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 1.972e-17
Identity = 41/62 (66.13%), Postives = 49/62 (79.03%), Query Frame = 2 
Query:  497 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIKHDVLKPLLL 682
            RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDV++PL +
Sbjct:   88 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYI 149
The following BLAST results are available for this feature:
BLAST of FC925863 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
UXS1_XENTR1.972e-1766.13UDP-glucuronic acid decarboxylase 1 OS=Xenopus tro... [more]
UXS1_RAT1.972e-1766.13UDP-glucuronic acid decarboxylase 1 OS=Rattus norv... [more]
UXS1_PONAB1.972e-1766.13UDP-glucuronic acid decarboxylase 1 OS=Pongo abeli... [more]
UXS1_MOUSE1.972e-1766.13UDP-glucuronic acid decarboxylase 1 OS=Mus musculu... [more]
UXS1_HUMAN1.972e-1766.13UDP-glucuronic acid decarboxylase 1 OS=Homo sapien... [more]
UXS1_DANRE1.972e-1766.13UDP-glucuronic acid decarboxylase 1 OS=Danio rerio... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP3YP17FM1 TF Citrus clementina cDNA clone KN0AAP3YP17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925863 ID=FC925863; Name=FC925863; organism=Citrus clementina; type=EST; length=683bp
CACAAGCCGGTGACTGAGCTCTCCCGGCCTGTTCAACTCAGCTGTAGCTC
GTGAAAAATTCACCTTCTCTTTTATATTTCTTCTCTCTTTGATCAGCTGA
TCTCGACATTGGAGCGAGGTGGGGTGTGATTAGAAATTCCCGAGGATGGG
GTCTGAGCTCATATACAGAGGCCACGACAGTCAACTGGCGACGGATTCTT
ATTCCCCTAAACCCATCAAGCCATGGTTCGCCGTGACCCAACCGATTCGC
TACATGCTCCGCGAGCAGCGACTCGTGTTCGTCCTCGTCGGCATTGCTAT
CGCCACCCTGTTTTTTACCGTCATTCCGACGTCGTATCCCGCCTCGTACG
GTGGGGCCCGCGGCCACGTAGCGATCTCGGATTCGCTGTCGTATTACCCC
GTCGAGACGTACCAAAGAGCCTACAACCCTCGCGTCGGGTTCGGGGCGGT
GAATTCGGGCGGGAAGATTCCCCTGGGGCTGAAACGGAAGGGGCTTAGAA
TAGTCGTCACGGGTGGGGCGGGGTTCGTCGGGTCTCACCTCGTGGACCGT
CTGATCGCGAGGGGCGACAGCGTGATCGTTGTAGATAATTTCTTCACGGG
AAGGAAAGAAAACGTGATGCACCACTTTGGTAACCCGAATTTTGAGCTCA
TCAAACACGACGTCCTCAAGCCTCTCTTGCTTG
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