FC925864
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925864 vs. ExPASy Swiss-Prot
Match: RPG1_ARATH (Protein RUPTURED POLLEN GRAIN 1 OS=Arabidopsis thaliana GN=RPG1 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.753e-40 Identity = 83/185 (44.86%), Postives = 122/185 (65.95%), Query Frame = 1 Query: 49 VGIIGNVISLLVFASPIKTFWQIVKKKSTESYKGVPYITTLMSTCLWTFYG--VMKPGGLVVATVNGAGAALQFIYVSLYLIYAPKDKKVKTAKL-VAILDVGFLGAVIAITLLAMHGN-LRLTFVGILCAALTIGMYASPLAVMTTVIRTKSVKYMPFLLSFFLFLNAGVWSVYSVLVK-DIYI 588 +G+IGNVIS +FA+P KTFW+I KKKS E + VPY+ T+M+ LW FYG V+ ++V+T+NG G ++ YV +YL+Y K + L L+V + A+I ITL A+ G+ ++ TFVG++C I MY +P + V++TKSV+YMPFLLS F+NAG+W+ YS++ K D Y+ Sbjct: 11 IGVIGNVISFGLFAAPAKTFWRIFKKKSVEEFSYVPYVATVMNCMLWVFYGLPVVHKDSILVSTINGVGLVIELFYVGVYLMYCGHKKNHRRNILGFLALEVILVVAIILITLFALKGDFVKQTFVGVICDVFNIAMYGAPSLAIIKVVKTKSVEYMPFLLSLVCFVNAGIWTTYSLIFKIDYYV 195
BLAST of FC925864 vs. ExPASy Swiss-Prot
Match: R1AP1_XENLA (RAG1-activating protein 1 homolog OS=Xenopus laevis GN=rag1ap1 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.518e-22 Identity = 63/176 (35.80%), Postives = 104/176 (59.09%), Query Frame = 1 Query: 67 VISLLVFASPIKTFWQIVKKKSTESYKGVPYITTLMSTCLWTFYGVMKPGGLVVATVNGAGAALQFIYVSLYLIYAPKDKKVKTAKLVAILDVGFLGAVIAITLLAMHGNLRLTFVGILCAALTIGMYASPLAVMTTVIRTKSVKYMPFLLSFFLFLNAGVWSVYSVLVKDIYIGV 594 V +L +F+S + +V ++S E+ + +P++TT ++ W +YG +K G ++ VN GA+LQ +Y+ YL+Y+P+ + V + LV+ L V LG TL + N RL +G+ C+ TI MY SPLA + +IR+KS K + F L+ FL + W +Y ++ D+YI V Sbjct: 13 VFTLGMFSSGLSDLRVMVAQRSVENIQYLPFLTTDLNNLGWFYYGYLKGDGTLMI-VNVIGASLQSLYMGAYLLYSPERRYVGSQVLVS-LGVLLLGYCY-FTLWILDLNSRLNQLGLFCSVFTISMYLSPLADLAQIIRSKSTKCLSFPLTVATFLTSSSWVLYGLVQSDLYITV 185
BLAST of FC925864 vs. ExPASy Swiss-Prot
Match: R1AP1_XENTR (RAG1-activating protein 1 homolog OS=Xenopus tropicalis GN=rag1ap1 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.421e-20 Identity = 62/176 (35.23%), Postives = 103/176 (58.52%), Query Frame = 1 Query: 67 VISLLVFASPIKTFWQIVKKKSTESYKGVPYITTLMSTCLWTFYGVMKPGGLVVATVNGAGAALQFIYVSLYLIYAPKDKKVKTAKLVAILDVGFLGAVIAITLLAMHGNLRLTFVGILCAALTIGMYASPLAVMTTVIRTKSVKYMPFLLSFFLFLNAGVWSVYSVLVKDIYIGV 594 V +L +F+S + +V K+S E+ + +P++TT ++ W +YG +K G ++ VN GA+LQ +Y++ Y++Y+ + + V + LV+ L V FL A TL N RL +G+ C+ TI MY SPLA + +I++KS K + F L+ FL + W +Y + D+YI V Sbjct: 13 VFTLGMFSSGLSDLRVMVAKRSVENIQFLPFLTTDLNNLGWFYYGYLKGDGTLII-VNLIGASLQTLYMAAYILYSLERRYVVSQVLVS-LGVLFL-AHCYFTLWTPDINSRLNQLGLFCSIFTISMYLSPLADLAQIIKSKSTKCLSFPLTVATFLTSTSWVLYGWVQSDLYITV 185
BLAST of FC925864 vs. ExPASy Swiss-Prot
Match: R1AP1_MOUSE (RAG1-activating protein 1 OS=Mus musculus GN=Rag1ap1 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.571e-19 Identity = 59/196 (30.10%), Postives = 105/196 (53.57%), Query Frame = 1 Query: 67 VISLLVFASPIKTFWQIVKKKSTESYKGVPYITTLMSTCLWTFYGVMKPGGLVVATVNGAGAALQFIYVSLYLIYAPKDKKV--KTAKLVAILDVGFLGAVIAITLLAMHGNLRLTFVGILCAALTIGMYASPLAVMTTVIRTKSVKYMPFLLSFFLFLNAGVWSVYSVLVKDIYIGVFTLIKTISGAKCRRVRLG 648 + +L +F++ + + + +S ++ + +P++TT ++ W YGV+K G ++ VN GA LQ +Y+ YL Y+P+ V +TA L+A+L +G+ LL RL +G+ C+ TI MY SPLA + +++TKS + + F L+ + WS+Y ++D YI + + G +RLG Sbjct: 17 LFTLGMFSTGLSDLRHMQRTRSVDNIQFLPFLTTDVNNLSWLSYGVLKGDGTLII-VNSVGAVLQTLYILAYLHYSPQKHGVLLQTATLLAVLLLGYG----YFWLLVPDLEARLQQLGLFCSVFTISMYLSPLADLAKIVQTKSTQRLSFSLTIATLFCSASWSIYGFRLRDPYI----TVPNLPGILTSLIRLG 203
BLAST of FC925864 vs. ExPASy Swiss-Prot
Match: R1AP1_HUMAN (RAG1-activating protein 1 OS=Homo sapiens GN=RAG1AP1 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.679e-19 Identity = 57/178 (32.02%), Postives = 99/178 (55.62%), Query Frame = 1 Query: 67 VISLLVFASPIKTFWQIVKKKSTESYKGVPYITTLMSTCLWTFYGVMKPGGLVVATVNGAGAALQFIYVSLYLIYAPKDKKV--KTAKLVAILDVGFLGAVIAITLLAMHGNLRLTFVGILCAALTIGMYASPLAVMTTVIRTKSVKYMPFLLSFFLFLNAGVWSVYSVLVKDIYIGV 594 V +L +F++ + + +S ++ + +P++TT ++ W YG +K G+++ VN GAALQ +Y+ YL Y P+ + V +TA L+ +L +G+ LL + RL +G+ C+ TI MY SPLA + VI+TKS + + + L+ L + W +Y ++D YI V Sbjct: 17 VFTLGMFSAGLSDLRHMRMTRSVDNVQFLPFLTTEVNNLGWLSYGALKGDGILIV-VNTVGAALQTLYILAYLHYCPRKRVVLLQTATLLGVLLLGYG----YFWLLVPNPEARLQQLGLFCSVFTISMYLSPLADLAKVIQTKSTQCLSYPLTIATLLTSASWCLYGFRLRDPYIMV 189
BLAST of FC925864 vs. ExPASy Swiss-Prot
Match: R1AP1_DANRE (RAG1-activating protein 1 homolog OS=Danio rerio GN=rag1ap1 PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 4.570e-19 Identity = 58/171 (33.92%), Postives = 97/171 (56.73%), Query Frame = 1 Query: 121 KKKSTESYKGV---PYITTLMSTCLWTFYGVMKPGGLVVATVNGAGAALQFIYVSLYLIYAPKDKKVKTAKL--VAILDVGFLGAVIAITLLAMHGNLRLTFVGILCAALTIGMYASPLAVMTTVIRTKSVKYMPFLLSFFLFLNAGVWSVYSVLVKDIYI------GVFT 600 K K+T+S V P++TT ++ W +YG++K G V+ VN GA LQ +Y++ Y Y + ++V T L V++L V + + +L+ G +L+ +G+ C+ TI MY SPLA + ++RTKSV+ + F L+ F + W++Y + + D YI G+FT Sbjct: 28 KMKATQSADNVQFLPFLTTCLNNLGWLYYGLLKGDGTVIF-VNIIGAFLQTVYIATYCHYTKEKRRVYTQTLLMVSVLCVAW----VYFSLVISPGEAQLSQLGLTCSVFTISMYLSPLADLLDIMRTKSVERLSFSLTVATFFTSTSWTLYGLQLGDYYIMVPNTPGIFT 193
BLAST of FC925864 vs. ExPASy Swiss-Prot
Match: R1AP1_PAPAN (RAG1-activating protein 1 OS=Papio anubis GN=RAG1AP1 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.869e-18 Identity = 56/178 (31.46%), Postives = 97/178 (54.49%), Query Frame = 1 Query: 67 VISLLVFASPIKTFWQIVKKKSTESYKGVPYITTLMSTCLWTFYGVMKPGGLVVATVNGAGAALQFIYVSLYLIYAPKDKKV--KTAKLVAILDVGFLGAVIAITLLAMHGNLRLTFVGILCAALTIGMYASPLAVMTTVIRTKSVKYMPFLLSFFLFLNAGVWSVYSVLVKDIYIGV 594 V +L +F++ + + +S ++ + +P++TT ++ W YG +K G ++ VN GAALQ +Y+ YL Y P+ + V +TA L+ +L +G+ LL + RL +G+ C+ TI MY SPLA + VI+TKS + + + L+ L + W +Y ++ YI V Sbjct: 17 VFTLGMFSAGLSDLRHMRMTRSVDNVQFLPFLTTEVNNLGWLSYGALK-GDRILIVVNTVGAALQTLYILAYLHYCPRKRVVLLQTATLLGVLLLGYG----YFWLLVPNPEARLQLLGLFCSVFTISMYLSPLADLAKVIQTKSTQCLSYPLTIATVLTSASWCLYGFRLRVPYIMV 189
BLAST of FC925864 vs. ExPASy Swiss-Prot
Match: R1AP1_DROPS (RAG1-activating protein 1 homolog OS=Drosophila pseudoobscura pseudoobscura GN=slv PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.389e-14 Identity = 48/159 (30.19%), Postives = 79/159 (49.69%), Query Frame = 1 Query: 118 VKKKSTESYKGVPYITTLMSTCLWTFYGVMKPGGLVVATVNGAGAALQFIYVSLYLIYAPKDKKVKTAKLVAILDVGFLGAVIAITLLAMHGNLRLTFVGILCAALTIGMYASPLAVMTTVIRTKSVKYMPFLLSFFLFLNAGVWSVYSVLVKDIYIGV 594 ++KKST GVP+I +S W YGV+ +V VN G+ L IY +Y ++ +K+ + +L V V+ LA + + GI C +T+ +A+PLA + VIR K+ + +P L FL + W +Y +L+ D +I + Sbjct: 32 IQKKSTGDSSGVPFICGFLSCSFWLRYGVLTEEQSIVL-VNIIGSTLFLIYTLIYYVFTV-NKRAFVRQFAFVLAVLIAVVVVYTNRLADQRDEMIRITGIFCCIVTVCFFAAPLATLLHVIRAKNSESLPLPLIATSFLVSLQWLIYGILISDSFIQI 188
BLAST of FC925864 vs. ExPASy Swiss-Prot
Match: R1AP1_DROME (RAG1-activating protein 1 homolog OS=Drosophila melanogaster GN=slv PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.172e-12 Identity = 45/164 (27.44%), Postives = 79/164 (48.17%), Query Frame = 1 Query: 118 VKKKSTESYKGVPYITTLMSTCLWTFYGVMKPGGLVVATVNGAGAALQFIYVSLYLIYAPKDKKVKTAKLVAILDVGFLGAVIAITL-----LAMHGNLRLTFVGILCAALTIGMYASPLAVMTTVIRTKSVKYMPFLLSFFLFLNAGVWSVYSVLVKDIYIGV 594 ++KKST GVP+I +S W YGV+ +V VN G+ L +Y +Y ++ K + GF+ V+ + + L + + GI+C +T+ +A+PLA + VIR K+ + +P L F+ + W +Y +L+ D +I + Sbjct: 33 IQKKSTGDSSGVPFICGFLSCSFWLRYGVLTNEQSIVL-VNIIGSTLFLVYTLIYYVFTVN-------KRACVKQFGFVLTVLVVVIVYTNRLEDQRDRMIHVTGIVCCIVTVCFFAAPLASLLHVIRAKNSESLPLPLIATSFVVSLQWLIYGILISDSFIQI 188
BLAST of FC925864 vs. ExPASy Swiss-Prot
Match: R1AP1_CAEBR (RAG1-activating protein 1 homolog OS=Caenorhabditis briggsae GN=CBG13500 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.229e-12 Identity = 53/203 (26.11%), Postives = 93/203 (45.81%), Query Frame = 1 Query: 49 VGIIGNVISLLVFASPIKTFW-------QIVKKKSTESYKGVPYITTLMSTCLWTFYGVMKPGGLVVATVNGAGAALQFIYVSLYLIYAPKDKKVKTAKLVAILDVGFLGAVIAITLLAMHGNLRLTFVGILCAALTIGMYASPLAVMTTVIRTKSVKYMPFLLSFFLFLNAGVWSVYSVLVKDIY------IGVFTLIKTIS 618 + ++ V+S+ + I F+ QI ++ + GVP++ ++ W YG++K ++ VN G +Y +LIY+ KK T +L+ + G V+ I L ++GI+C I + +PLA + V+R + V +P + FL + W +Y LV+DIY IG+F I +S Sbjct: 2 IEVVLQVLSISAITTTIALFFCGIPICMQIRRQGAVGDISGVPFLMGVLGGSFWLRYGLLKMDYTMII-VNVVGVFCMAVYCIFFLIYS-LPKKTFTCQLILVTST-ITGMVVWIAFKP-----NLDYLGIICMTFNIMNFGAPLAGLGVVLRNREVSTLPLPMCVANFLVSSQWCLYGNLVQDIYIIIPNGIGMFLAIVQLS 196 The following BLAST results are available for this feature:
BLAST of FC925864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925864 ID=FC925864; Name=FC925864; organism=Citrus clementina; type=EST; length=672bpback to top |