FC926441

Overview
NameFC926441
Unique NameFC926441
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length880
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC926441 vs. ExPASy Swiss-Prot
Match: TTHL_ARATH (Uric acid degradation bifunctional protein TTL OS=Arabidopsis thaliana GN=TTL PE=1 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 8.645e-57
Identity = 121/226 (53.54%), Postives = 152/226 (67.26%), Query Frame = 3 
Query:  123 CCGSTKFAKEMASASPFASLNQAVSAARHIWFNLVDVNGWLDAFSAHPQIGQSPS-------SQWSKAEQSTALATANESSSQELSDWNNRYRLRFGFIFIICASGRTAAEILAELKKRYTNRPIIEFEIAAQEQMKITEXXXXXXXXXXXXXXXXTFQYSATAKT-AEDRVSIIEGHLCASTEASAGKISQIPTRTRLPITTHVLDVSQGSPAAGVEVRLEMWKG 776
            CCGS++FAK+M+++ P  S  +A+  AR IWFN V+V  WL+AFSAHPQIG +PS       ++ S +EQSTA AT + S+ QEL++WN  Y+ +FGFIFIICASGRT AE+L  LK+RY NRPI+E EIAA EQMKITE                T   S+   T  +DR+ II GHL  + EA A      P R+R PITTHVLDVS+G+PAAGVEV LE+W G
Sbjct:   13 CCGSSEFAKQMSTSGPLTS-QEAIYTARDIWFNQVNVTDWLEAFSAHPQIGNTPSPSINSDFARRSVSEQSTAFATTSASALQELAEWNVLYKKKFGFIFIICASGRTHAEMLHALKERYENRPIVELEIAAMEQMKITELRMAKLFSDKAKVISETDSSSSPVSTKPQDRLRIIGGHLNVAAEAKA------PKRSRPPITTHVLDVSRGAPAAGVEVHLEVWSG 231
The following BLAST results are available for this feature:
BLAST of FC926441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TTHL_ARATH8.645e-5753.54Uric acid degradation bifunctional protein TTL OS=... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP5YO19FM1 TF Citrus clementina cDNA clone KN0AAP5YO19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC926441 ID=FC926441; Name=FC926441; organism=Citrus clementina; type=EST; length=880bp
TTAATTTTTTTTATTAATGAATGGTATTATTAGAATATATTGGGTTGATT
GATGAGTGATCGACAGACACCCGAGAAATGGAGGAGATGATGGTGGTTTT
GGATGAGGAGGAGTTGTTGGGATGCTGCGGTAGCACCAAATTTGCGAAAG
AGATGGCGTCGGCCTCACCTTTTGCATCATTGAATCAAGCCGTCTCAGCA
GCTCGACACATCTGGTTCAACCTGGTTGATGTAAACGGCTGGCTTGATGC
ATTTTCGGCTCATCCTCAGATCGGCCAATCTCCGTCTTCACAGTGGAGCA
AGGCCGAGCAGTCCACTGCTTTAGCAACTGCTAATGAATCTAGCTCGCAG
GAACTGTCCGACTGGAATAATCGGTACAGGCTGAGATTTGGATTTATATT
TATTATATGTGCATCGGGGAGGACGGCTGCCGAAATACTTGCTGAGTTGA
AGAAACGATACACAAACAGGCCCATAATTGAGTTTGAGATTGCTGCTCAG
GAGCAAATGAAAATAACTGAATTACGTCTGGCAAAGCTCTTCTCAGCTAA
AGCAAAAGCTTCTTCTGCAACTTTCCAGTATTCTGCAACTGCAAAAACAG
CAGAAGATCGTGTGAGCATCATAGAAGGACACCTATGTGCTTCTACTGAA
GCTTCAGCAGGGAAAATATCTCAAATCCCTACAAGAACTCGACTACCAAT
TACAACACATGTCTTGGATGTTTCTCAAGGGTCTCCAGCTGCCGGTGTTG
AGGTACGTTTGGAAATGTGGAAGGGCATCCCACCCCCTCCCCCTCTTTGG
CCAACCAAATGTCAGTGGGGTGGGTGTACCCAGGGGTCTTCAACTACCAA
ATAAAGATGGACGAAGTGGTCCATTTGATG
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