FC927432

Overview
NameFC927432
Unique NameFC927432
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length522
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC927432 vs. ExPASy Swiss-Prot
Match: PIMT_WHEAT (Protein-L-isoaspartate O-methyltransferase OS=Triticum aestivum GN=PCM PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 3.143e-44
Identity = 79/114 (69.30%), Postives = 99/114 (86.84%), Query Frame = 2
Query:  179 MERYWSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGV 520
            M ++W+   + KN A+VE+L+ YGV+ + KV+EVMETIDRA FVP+G  PY DSPM IGYNATISAPHMHATCL+LL++ L+PGMHALD+GSG+GYLTACFA+MVGP+GRAVG+
Sbjct:    1 MAQFWAEGSLEKNNALVEYLKQYGVVRTDKVAEVMETIDRALFVPEGFTPYTDSPMPIGYNATISAPHMHATCLELLKDYLQPGMHALDVGSGSGYLTACFAMMVGPEGRAVGI 114          
BLAST of FC927432 vs. ExPASy Swiss-Prot
Match: PIMT_ARATH (Protein-L-isoaspartate O-methyltransferase OS=Arabidopsis thaliana GN=PCM PE=2 SV=3)

HSP 1 Score: 171.785 bits (434), Expect = 1.724e-42
Identity = 77/114 (67.54%), Postives = 98/114 (85.96%), Query Frame = 2
Query:  179 MERYWSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGV 520
            M+++WS S +NKNKAMVE+LQ++G++TS +V++ ME +DR  FV D +  YVDSPM+IGYN TISAPHMHA CLQLLE++LKPGM  LD+GSGTGYLTACFA+MVG +GRA+GV
Sbjct:    1 MKQFWSPSSINKNKAMVENLQNHGIVTSDEVAKAMEAVDRGVFVTDRSSAYVDSPMSIGYNVTISAPHMHAMCLQLLEKHLKPGMRVLDVGSGTGYLTACFAVMVGTEGRAIGV 114          
BLAST of FC927432 vs. ExPASy Swiss-Prot
Match: PIMT_CHICK (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Gallus gallus GN=PCMT1 PE=2 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 2.341e-23
Identity = 54/110 (49.09%), Postives = 74/110 (67.27%), Query Frame = 2
Query:  191 WSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGV 520
            W   G + ++ ++ +L+  G+I S KV EVM   DR  +      PY+DSP +IG+ ATISAPHMHA  L+LL + L  G  ALD+GSG+G LTACF+ MVGP+G+ VG+
Sbjct:    3 WKSGGASHSE-LIHNLRKNGIIKSDKVFEVMLATDRCHYAKYN--PYMDSPQSIGFQATISAPHMHAYALELLSDQLHEGAKALDVGSGSGILTACFSRMVGPKGQVVGI 109          
BLAST of FC927432 vs. ExPASy Swiss-Prot
Match: PIMT_CAEEL (Protein-L-isoaspartate O-methyltransferase OS=Caenorhabditis elegans GN=pcm-1 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 3.994e-23
Identity = 51/110 (46.36%), Postives = 72/110 (65.45%), Query Frame = 2
Query:  191 WSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGV 520
            W  SG + N  ++++L++  V  S++  + M+++DR  F P    PY D+P  IGYNAT+SAPHMHA  L  L+ +L  G  ALD+GSG+GYLT C A+MVG  G  VG+
Sbjct:    3 WRSSG-STNSELIDNLRNNRVFASQRAYDAMKSVDRGDFAPRA--PYEDAPQRIGYNATVSAPHMHAAALDYLQNHLVAGAKALDVGSGSGYLTVCMAMMVGRNGTVVGI 109          
BLAST of FC927432 vs. ExPASy Swiss-Prot
Match: PIMT_BOVIN (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Bos taurus GN=PCMT1 PE=1 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 3.994e-23
Identity = 53/110 (48.18%), Postives = 74/110 (67.27%), Query Frame = 2
Query:  191 WSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGV 520
            W   G + ++ ++ +L+  G+I + KV EVM   DR+ +      PY+DSP +IG+ ATISAPHMHA  L+LL + L  G  ALD+GSG+G LTACFA MVGP G+ +G+
Sbjct:    3 WKSGGASHSE-LIHNLRKNGIIKTDKVFEVMLATDRSHYAKCN--PYMDSPQSIGFQATISAPHMHAYALELLFDQLNEGAKALDVGSGSGILTACFARMVGPSGKVIGI 109          
BLAST of FC927432 vs. ExPASy Swiss-Prot
Match: PIMT_PIG (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Sus scrofa GN=PCMT1 PE=1 SV=3)

HSP 1 Score: 107.071 bits (266), Expect = 5.216e-23
Identity = 53/110 (48.18%), Postives = 74/110 (67.27%), Query Frame = 2
Query:  191 WSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGV 520
            W   G + ++ ++ +L+  G+I + KV EVM   DR+ +      PY+DSP +IG+ ATISAPHMHA  L+LL + L  G  ALD+GSG+G LTACFA MVGP G+ +G+
Sbjct:    3 WKSGGASHSE-LIHNLRKNGIIKTDKVFEVMLATDRSHYAKCN--PYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGPSGKVIGI 109          
BLAST of FC927432 vs. ExPASy Swiss-Prot
Match: PIMT_DANRE (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Danio rerio GN=pcmt PE=2 SV=3)

HSP 1 Score: 105.531 bits (262), Expect = 1.518e-22
Identity = 53/110 (48.18%), Postives = 73/110 (66.36%), Query Frame = 2
Query:  191 WSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGV 520
            W   G + +  +V +L+  G+I S +V EVM   DR+ F      PY+DSP +IGY ATISAPHMHA  L+LL ++L  G  ALD+GSG+G L+ CF+ MVGP G+ +G+
Sbjct:    3 WKSGGAS-HAELVNNLRKNGIIKSDRVYEVMLATDRSHF--SRCNPYMDSPQSIGYQATISAPHMHAYALELLHDHLYEGAKALDVGSGSGILSVCFSRMVGPTGKVIGI 109          
BLAST of FC927432 vs. ExPASy Swiss-Prot
Match: PIMT_RAT (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Rattus norvegicus GN=Pcmt1 PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 2.589e-22
Identity = 52/110 (47.27%), Postives = 73/110 (66.36%), Query Frame = 2
Query:  191 WSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGV 520
            W   G + ++ ++ +L+  G+I + KV EVM   DR+ +      PY+DSP +IG+ ATISAPHMHA  L+LL + L  G  ALD+GSG+G LTACFA MVG  G+ +G+
Sbjct:    3 WKSGGASHSE-LIHNLRKNGIIKTDKVFEVMLATDRSHYAKSN--PYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGHSGKVIGI 109          
BLAST of FC927432 vs. ExPASy Swiss-Prot
Match: PIMT_MOUSE (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Mus musculus GN=Pcmt1 PE=1 SV=3)

HSP 1 Score: 104.76 bits (260), Expect = 2.589e-22
Identity = 52/110 (47.27%), Postives = 73/110 (66.36%), Query Frame = 2
Query:  191 WSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGV 520
            W   G + ++ ++ +L+  G+I + KV EVM   DR+ +      PY+DSP +IG+ ATISAPHMHA  L+LL + L  G  ALD+GSG+G LTACFA MVG  G+ +G+
Sbjct:    3 WKSGGASHSE-LIHNLRKNGIIKTDKVFEVMLATDRSHYAKSN--PYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGNSGKVIGI 109          
BLAST of FC927432 vs. ExPASy Swiss-Prot
Match: PIMT_SCHPO (Probable protein-L-isoaspartate O-methyltransferase OS=Schizosaccharomyces pombe GN=pcm2 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 5.767e-22
Identity = 53/111 (47.75%), Postives = 71/111 (63.96%), Query Frame = 2
Query:  188 YWSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGV 520
            +WS + ++ N A+V+HL     +T+++  + M    R+ + P    PY+DSP +IGY  TISAPHMHAT LQ LE  L+PG  ALDIGSG+GYL A  A MV P G   G+
Sbjct:    2 FWSFN-LSSNAALVQHLVESKFLTNQRAIKAMNATSRSFYCP--LSPYMDSPQSIGYGVTISAPHMHATALQELEPVLQPGCSALDIGSGSGYLVAAMARMVAPNGTVKGI 109          
The following BLAST results are available for this feature:
BLAST of FC927432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
PIMT_WHEAT3.143e-4469.30Protein-L-isoaspartate O-methyltransferase OS=Trit... [more]
PIMT_ARATH1.724e-4267.54Protein-L-isoaspartate O-methyltransferase OS=Arab... [more]
PIMT_CHICK2.341e-2349.09Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_CAEEL3.994e-2346.36Protein-L-isoaspartate O-methyltransferase OS=Caen... [more]
PIMT_BOVIN3.994e-2348.18Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_PIG5.216e-2348.18Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_DANRE1.518e-2248.18Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_RAT2.589e-2247.27Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_MOUSE2.589e-2247.27Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_SCHPO5.767e-2247.75Probable protein-L-isoaspartate O-methyltransferas... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YL04FM1 TF Citrus clementina cDNA clone KN0AAP10YL04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC927432 ID=FC927432; Name=FC927432; organism=Citrus clementina; type=EST; length=522bp
TTATTATATGCCTGGTTTAAAGCACATATTATCAACCTTCACTCTTATCC
CTCACCGTCATCGCTGTTCTTACTTACCATCACCGTCACCGTCACTTGTC
TCTTTGTCTTCTTCTTTTCATCTTCCAAATCCAGATAACCTCAGTCGTTT
CCTCACGGGTAACTGTCCCTTTTTCAAGATGGAGCGATACTGGAGTGGAA
GTGGTGTCAACAAGAATAAAGCGATGGTGGAGCATTTGCAGCATTATGGA
GTGATTACATCAAAAAAGGTATCTGAAGTAATGGAAACTATTGATCGGGC
TTGCTTTGTGCCAGATGGTACTCCACCTTATGTTGACAGCCCAATGGCAA
TAGGTTACAATGCCACTATTTCAGCACCTCATATGCATGCAACATGCCTT
CAATTATTGGAGGAGAATCTGAAACCTGGCATGCACGCTTTGGATATTGG
TTCTGGAACTGGATATTTGACAGCATGCTTTGCCTTGATGGTTGGACCAC
AAGGTCGTGCTGTGGGTGTCGA
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