FC927469

Overview
NameFC927469
Unique NameFC927469
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length614
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC927469 vs. ExPASy Swiss-Prot
Match: 12KD_FRAAN (Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.503e-11
Identity = 29/40 (72.50%), Postives = 34/40 (85.00%), Query Frame = 3 
Query:  390 RKDNVWRSVFHPGSNLATRGIGAEVFDKPTHPNSPAVYDW 509
            RKDNVWRSVFHPGSNL+++ +G +VFD P  PNSP VYDW
Sbjct:   61 RKDNVWRSVFHPGSNLSSKTMGNQVFDSP-QPNSPTVYDW 99
The following BLAST results are available for this feature:
BLAST of FC927469 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
12KD_FRAAN6.503e-1172.50Auxin-repressed 12.5 kDa protein OS=Fragaria anana... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP9YC03FM1 TF Citrus clementina cDNA clone KN0AAP9YC03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC927469 ID=FC927469; Name=FC927469; organism=Citrus clementina; type=EST; length=614bp
ATTTAGAAACTATCAGCTAAATTGTAAATTTAAAGATGCTAGAGAAGCTT
TGGGACGATGTTGTGGCAGGGCCTCAGCCTGATCGTGGCCTTGGCAGGCT
GAGGAAAATCACCACAACACCCTTAGCAGTCAAAGGTAGTTTTTTTTTTT
TTTCTTCTTAAAAATATCTCATTTATTGTTATATTTCAGTATCTTCTTCT
CCAAAGATTATGAAAAAATATATATAAGTTTTTTTTCTCAGTTTTTTAAT
TATGTGTGATTCTTATTGTTATTGGGTAGAGGGTGGTGAGGCGGAGTCGT
CGTCGGGCAAGTTCCACAGGTCTCTGTCAATGCCAGCGAGTCCAGGGGCA
CCGTCGACCCCAGTGACGCCGACGACGCCGCTGTCGGCGCGTAAGGACAA
CGTGTGGAGGAGCGTGTTTCACCCCGGTAGCAACCTTGCTACTAGGGGTA
TCGGTGCAGAGGTCTTTGACAAGCCCACACATCCTAACTCTCCCGCTGTT
TATGACTGGTAGGTACGTGCGTGTGTCCTCACTCAGTGGCTAGCTCGCTC
ACTCTCACTTCACTATCATAGATGCTGCAGGCTAGTACTAACTTATTATT
CTTCCTCTAGACCC
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