FC927476

Overview
NameFC927476
Unique NameFC927476
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length540
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC927476 vs. ExPASy Swiss-Prot
Match: QCR9_SOLTU (Cytochrome b-c1 complex subunit 9 OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 5.682e-23
Identity = 49/72 (68.06%), Postives = 58/72 (80.56%), Query Frame = 1 
Query:   49 MEYTTKRSQGGLLEGLYRVIMRRNSIYVTFIIAGAFAGERAVDYGVRKIWEHNNVGKRYEDIPVLGQRQSEE 264
            ME   +RS GG+LEG YR++MRR  +YVTF+IAGA  GERAVDYGV+ +WE NNVGKRYEDI VLGQR  +E
Sbjct:    1 MESAARRSGGGVLEGFYRLVMRRTPVYVTFVIAGALLGERAVDYGVKTLWEKNNVGKRYEDISVLGQRPVDE 72
The following BLAST results are available for this feature:
BLAST of FC927476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
QCR9_SOLTU5.682e-2368.06Cytochrome b-c1 complex subunit 9 OS=Solanum tuber... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP4YB02FM1 TF Citrus clementina cDNA clone KN0AAP4YB02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC927476 ID=FC927476; Name=FC927476; organism=Citrus clementina; type=EST; length=540bp
CTGTATTGCAGACTTATCAGAGCGAATCGAATTCCTGAACGAACAGCCAT
GGAGTATACAACCAAACGAAGCCAAGGAGGCCTCCTCGAAGGTCTTTACA
GAGTCATCATGCGCCGCAACTCCATCTACGTAACCTTCATCATCGCCGGC
GCTTTCGCTGGTGAACGGGCTGTGGATTATGGGGTTCGCAAAATCTGGGA
GCACAACAATGTTGGGAAACGATATGAAGACATTCCAGTTTTGGGGCAAA
GGCAATCAGAAGAGTAGTACCTCTCCTGTTCATTCTGAAGTTTTATATAA
AAAATTTGAAAGGGGCGTCCAATGTAATGGATAGCTGTTTTATGTTGCAA
TAAATTTTTTGTATGCTTGAGTGCATCAGACGTGTTTTTCAAGCTTGGTT
TCAATCAAATAGGTTTTGGAGTTATTGAATTGATGTGAATTGCGTATTGC
TTCAACTATTTGTCCGAGAACGTGTTCTTGCACTTGTTCAGTTTATAGAA
CATTAATTTGAATTGTATCCCACAAAAAAAAAAAAAAAAA
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