FC928214

Overview
NameFC928214
Unique NameFC928214
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length843
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14945 contig Ccv1_Contig14945:1..843. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: MRH1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase MRH1 OS=Arabidopsis thaliana GN=MRH1 PE=2 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 2.938e-83
Identity = 150/279 (53.76%), Postives = 196/279 (70.25%), Query Frame = 2
Query:    8 LLVATVGIYLCRCNKVSTVKPWATGLSGQLQKAFVTGVPKLKRSELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAM---AEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVPPLQQFVDPTL 835
            LL+    I+ CR   V ++ PW TGLSGQLQKAFVTGVPKL RSELE ACEDFSN+I +    TVYKGTLS+GVEI          K+W + +E+ +R+KIDTLS++NHKNFVNLIG+CEE++PF RMMVFEYAPNGTLFEH+H KE+EHLDW  R+RI MG AYCL+HMH +NPP+AH   NSS ++LT+DYAAK+S++ F  E  +     +                 NV++FGVL+ E+++G+L +  + GS+E WA+ YL     L + +DP+L
Sbjct:  334 LLIIVAVIFFCRKRAVKSIGPWKTGLSGQLQKAFVTGVPKLNRSELETACEDFSNIIETFDGYTVYKGTLSSGVEIAVASTAIAESKEWTRAMEMAYRRKIDTLSRINHKNFVNLIGYCEEDDPFNRMMVFEYAPNGTLFEHLHDKETEHLDWSARMRIIMGTAYCLQHMHGMNPPMAHTDFNSSEIYLTDDYAAKVSEIPFNLEARLNPKKHVSGDLEQTSLLLPPEPEANVHSFGVLMLEIISGKLSFSDEYGSIEQWASKYLE-KDDLGEMIDPSL 611          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: Y5458_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45840 OS=Arabidopsis thaliana GN=At5g45840 PE=2 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 4.690e-81
Identity = 150/283 (53.00%), Postives = 196/283 (69.26%), Query Frame = 2
Query:    2 AILLVATVGIYLCRCNKVSTVKPWATGLSGQLQKAFVTGVPKLKRSELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIA---MAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVPPLQQFVDPTLTS 841
            A+L++  V I+  R   V ++ PW TGLSGQLQKAFVTGVPKL RSELE ACEDFSN+I +    TVYKGTLS+GVEI          ++W + +E+ +R++IDT+S+VNHKNF+NLIG+CEE+EPF RMMVFEYAPNGTLFEH+H KE EHLDW  R RI MG AYCL++MH+LNPPI+H  L SSA++LT+DYAAK+ ++ F  +        M                 NVY+FGVL+ E+++G+L    + GS+  WA+ YL     L+  +DPTLT+
Sbjct:  350 AMLIIVAV-IFFFRKRAVKSIGPWKTGLSGQLQKAFVTGVPKLNRSELETACEDFSNIIEAFDGYTVYKGTLSSGVEIAVASTAILETREWTRAMEMTYRRRIDTMSRVNHKNFINLIGYCEEDEPFNRMMVFEYAPNGTLFEHLHDKEMEHLDWNARTRIIMGTAYCLQYMHELNPPISHTKLVSSAIYLTDDYAAKVGEVPFSGQTGSKPRKPMSGDLDQSLLPLPPEPETNVYSFGVLMLEIISGKLSDSEEEGSILKWASKYLEN-DNLRDMIDPTLTT 630          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: Y1634_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g63430 OS=Arabidopsis thaliana GN=At1g63430 PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.799e-48
Identity = 107/295 (36.27%), Postives = 159/295 (53.90%), Query Frame = 2
Query:    5 ILLVATVGIYLCRCNKVSTVKPWATGLSGQ------LQKAFVTGVPKLKRSELEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFW-----------NEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSGVPPLQQFVDPTL 835
            +LLVA         N+ + + PW    S +      +    +  V +L R ELE ACEDFSN+IG S    +YKGTL  G EI          +DW   LE+ F++++  L+++NH+N   L+G+C+E  PFTRM+VFEYA NGTL+EH+H  E+  + W  R++I +G+A  L+++H +L+PP   + L+S+A++LTED+  KL D   W             I+                     N+Y FG+LL E+V+GR PY  D G L +WA ++L     +   VDP L
Sbjct:  303 LLLVALFSAVHRWNNRSTLIIPWKKSSSEKEKFTVYVDSEMLKDVSRLTRQELEVACEDFSNIIGLSADSQIYKGTLKGGSEIAVISLCVKE-EDWTGYLELYFQREVADLARLNHENTAKLLGYCKEISPFTRMLVFEYASNGTLYEHLHYGEAALVSWARRMKIVIGIARGLKYLHMELDPPFTISELSSNAIYLTEDFTPKLVDFECWKTILARSEKNLRNISSQGSICVLPNGMESRYLDVSGNIYAFGILLLEIVSGRPPYCKDKGFLIEWAKEFLEAPEAMSGLVDPEL 596          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.795e-25
Identity = 85/275 (30.91%), Postives = 131/275 (47.64%), Query Frame = 2
Query:    5 ILLVATVGIYLCRCNK-----VSTVKPWATGLSG--QLQKAFVTGVPKLKRSELEAACEDFS--NVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMHQL-NPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAE-----------MXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGS 766
            +LL+A  GIY  R  K        + P+A   +G  ++    + G       EL     +FS  N +G    G VYKGTL NG  I          +        +F+ +I+ LS+V+HKN V L+GFC +++   +M+V+EY PNG+L + +  K    LDW  RL+IA+G    L ++H+L +PPI H  + S+ + L E   AK++D      +   E           M                 +VY FGV++ E++TG+ P  +D GS
Sbjct:  574 LLLLALAGIYALRQKKRAQRATDQMNPFAKWDAGKNEMDAPQLMGTKAFTFEELSKCTNNFSDANDVGGGGYGQVYKGTLPNGQVIAIKRAQQGSMQG-----AFEFKTEIELLSRVHHKNVVKLLGFCFDQKE--QMLVYEYIPNGSLRDGLSGKNGVKLDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKVADFGLSKLVGDPEKAHVTTQVKGTMGYLDPEYYMTNQLTEKSDVYGFGVVMLELLTGKSP--IDRGS 839          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 2.616e-23
Identity = 72/225 (32.00%), Postives = 114/225 (50.67%), Query Frame = 2
Query:  140 ELEAACEDFSN--VIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHL-DWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDL----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLE 772
            ELE A ++FS   ++G    GTVYKG L +G  +          K   ++   +F  ++  LS++NH++ V L+G C E E  T  +V+E+ PNG LF+HIH +  ++   WGMRLRIA+ +A  L ++H   + PI H  + S+ + L E Y  K+SD           + W  +    +                 +VY+FGV+L E++TG  P +  + S E
Sbjct:  443 ELEKATDNFSESRILGQGGQGTVYKGMLVDGRTVAVKKS-----KVVDEDKLEEFINEVVILSQINHRHVVKLLGCCLETEVPT--LVYEFIPNGNLFQHIHEESDDYTKTWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRTKVSDFGTSRSVTIDHTHWTTVISGTVGYVDPEYYGSSQYTDKSDVYSFGVVLVELITGEKPVITVSNSQE 660          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 3.416e-23
Identity = 76/249 (30.52%), Postives = 119/249 (47.79%), Query Frame = 2
Query:  110 VTGVPKLKRSELEAACEDF--SNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEHLDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWNEIAMAEM----------------XXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLEDWAADYLSG 799
            + GV     +EL  A ++F  S  IG    G VYKGTL +G  +          +      E +F  +I+ LS+++H+N V+L+GFC+EE    +M+V+EY  NGTL ++I +K  E LD+ MRLRIA+G A  + ++H + NPPI H  + +S + L   + AK++D        + +M                                 +VY+ GV+L E+ TG  P       + +    Y SG
Sbjct:  607 IEGVKSFTYAELALATDNFNSSTQIGQGGYGKVYKGTLGSGTVVAIKRAQEGSLQG-----EKEFLTEIELLSRLHHRNLVSLLGFCDEEGE--QMLVYEYMENGTLRDNISVKLKEPLDFAMRLRIALGSAKGILYLHTEANPPIFHRDIKASNILLDSRFTAKVADFGLSRLAPVPDMEGISPQHVSTVVKGTPGYLDPEYFLTHQLTDKSDVYSLGVVLLELFTGMQPITHGKNIVREINIAYESG 848          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.827e-23
Identity = 74/226 (32.74%), Postives = 116/226 (51.33%), Query Frame = 2
Query:  140 ELEAACEDFSN--VIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH--LDWGMRLRIAMGMAYCLEHMH-QLNPPIAHNYLNSSAVHLTEDYAAKLSDL----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLE 772
            ELE A E+FS   V+G    GTVYKG L +G  +          K   ++   +F  ++  LS++NH++ V L+G C E E    M+V+E+  NG LF+HIH +ES+   + WGMRLRIA+ +A  L ++H   + PI H  + S+ + L E Y AK++D           + W  +    +                 +VY+FGV+L E++TG  P ++   + E
Sbjct:  445 ELEKATENFSENRVLGHGGQGTVYKGMLVDGRTVAVKKS-----KVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLETE--VPMLVYEFIINGNLFKHIHEEESDDYTMLWGMRLRIAVDIAGALSYLHSSASSPIYHRDIKSTNILLDEKYRAKVADFGTSRSVTIDQTHWTTVISGTVGYVDPEYYQSSQYTEKSDVYSFGVILAELITGDKPVIMVQNTQE 663          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.610e-23
Identity = 70/213 (32.86%), Postives = 112/213 (52.58%), Query Frame = 2
Query:  143 LEAACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIH-IKESEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLS----------DLSFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLP 745
            LE A ++FS  +G    G+VY G + +G E+           D   +L  QF  ++  LS+++H+N V LIG+CEE +   R++V+EY  NG+L +H+H   + + LDW  RL+IA   A  LE++H   NP I H  + SS + L  +  AK+S          DL+  + +A   +                 +VY+FGV+LFE+++G+ P
Sbjct:  601 LEEATDNFSKKVGRGSFGSVYYGRMKDGKEVAVKITA-----DPSSHLNRQFVTEVALLSRIHHRNLVPLIGYCEEAD--RRILVYEYMHNGSLGDHLHGSSDYKPLDWLTRLQIAQDAAKGLEYLHTGCNPSIIHRDVKSSNILLDINMRAKVSDFGLSRQTEEDLTHVSSVAKGTVGYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKP 806          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: SRF4_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsis thaliana GN=SRF4 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.695e-22
Identity = 73/255 (28.63%), Postives = 121/255 (47.45%), Query Frame = 2
Query:  116 GVPKLKRSELE--AACEDFSNVIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKE--SEHLDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDLSFWN----EIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNG------SLEDWAADYLSGVPPLQQFVDPTL 835
            GV     ++L+  A+C   + ++G   IG VYK    +G +               K    +F   + ++S ++HKN   L+G+C E+     M+V+EY  +G+L   +H+ +  S+ L W  R+RIA+G A  +E++H+  +PP+ H  + SS + L  +   +LSD    N          +                 +VY+FGV++ E++TGR PY  D+G      SL  WA   L  +  L + VDP L
Sbjct:  399 GVKAFSLADLQNTASCFSPNRLLGEGTIGRVYKAKFQDGRKFAVKEIDSSLLG---KGNPEEFSHIVSSISSIHHKNMAELVGYCSEQG--RNMLVYEYFTSGSLHRFLHLSDDFSKPLTWNTRIRIALGTAKAIEYLHETCSPPLVHKNIKSSNILLDNELNPRLSDYGLANFHHRTSQNLGVGYNAPECTDPSAYTQKSDVYSFGVVMLELLTGRKPY--DSGRPKAEQSLVRWAKPQLKDMDTLDEMVDPAL 646          
BLAST of FC928214 vs. ExPASy Swiss-Prot
Match: WAKLM_ARATH (Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.892e-22
Identity = 72/226 (31.86%), Postives = 116/226 (51.33%), Query Frame = 2
Query:  140 ELEAACEDFSN--VIGSSPIGTVYKGTLSNGVEIXXXXXXXXXXKDWPKNLEVQFRKKIDTLSKVNHKNFVNLIGFCEEEEPFTRMMVFEYAPNGTLFEHIHIKESEH--LDWGMRLRIAMGMAYCLEHMHQ-LNPPIAHNYLNSSAVHLTEDYAAKLSDL----------SFWNEIAMAEMXXXXXXXXXXXXXXXXXNVYNFGVLLFEMVTGRLPYLVDNGSLE 772
            ELE A E+FS   V+G    GTVYKG L +G  +          K   ++   +F  ++  LS++NH++ V L+G C E E    ++V+E+  NG LF+HIH +E++   + WGMRLRIA+ +A  L ++H   + PI H  + S+ + L E Y AK++D           + W  +    +                 +VY+FGV+L E++TG  P ++   + E
Sbjct:  436 ELEKATENFSENRVLGHGGQGTVYKGMLVDGRTVAVKKS-----KVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLETE--VPILVYEFIINGNLFKHIHEEEADDYTMIWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRAKVADFGTSRSVTIDQTHWTTVISGTVGYVDPEYYRSSQYTEKSDVYSFGVILAELITGDKPVIMVQNTQE 654          
The following BLAST results are available for this feature:
BLAST of FC928214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
MRH1_ARATH2.938e-8353.76Probable LRR receptor-like serine/threonine-protei... [more]
Y5458_ARATH4.690e-8153.00Probable LRR receptor-like serine/threonine-protei... [more]
Y1634_ARATH1.799e-4836.27Probable LRR receptor-like serine/threonine-protei... [more]
Y5977_ARATH2.795e-2530.91Probable leucine-rich repeat receptor-like protein... [more]
WAKLK_ARATH2.616e-2332.00Putative wall-associated receptor kinase-like 11 O... [more]
Y1684_ARATH3.416e-2330.52Probable LRR receptor-like serine/threonine-protei... [more]
WAKLN_ARATH5.827e-2332.74Wall-associated receptor kinase-like 18 OS=Arabido... [more]
Y1677_ARATH7.610e-2332.86Probable LRR receptor-like serine/threonine-protei... [more]
SRF4_ARATH1.695e-2228.63Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsi... [more]
WAKLM_ARATH2.892e-2231.86Wall-associated receptor kinase-like 17 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP4YN02FM1 TF Citrus clementina cDNA clone KN0AAP4YN02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC928214 ID=FC928214; Name=FC928214; organism=Citrus clementina; type=EST; length=843bp
CGCCATACTTCTGGTTGCAACTGTGGGCATATATCTCTGCAGATGCAATA
AGGTATCTACTGTCAAACCTTGGGCCACAGGATTGAGCGGACAGCTTCAG
AAAGCATTTGTAACTGGTGTTCCAAAGCTTAAGAGATCCGAGCTTGAAGC
AGCTTGTGAAGATTTCAGTAATGTAATTGGTTCTTCACCGATTGGTACGG
TGTACAAAGGGACATTGTCTAATGGAGTTGAAATAGCTGTGGCCTCTGTC
TCAGTGGCATCTGCCAAGGATTGGCCTAAGAACTTAGAAGTGCAGTTTAG
GAAGAAGATTGACACGTTATCAAAAGTGAACCACAAAAATTTTGTCAATC
TTATTGGATTTTGTGAAGAAGAGGAGCCTTTCACAAGAATGATGGTGTTT
GAATATGCTCCTAATGGAACACTCTTTGAGCATATACACATTAAAGAATC
AGAGCACTTGGACTGGGGAATGAGGCTGCGGATTGCAATGGGTATGGCTT
ACTGCCTAGAGCATATGCATCAGCTGAACCCACCCATAGCCCACAATTAC
TTGAACTCTTCAGCTGTCCATCTGACTGAGGACTATGCAGCCAAATTATC
AGACTTAAGCTTCTGGAATGAGATAGCCATGGCTGAAATGGCAGCAACTA
GCAAAAAACTTTCAAGTGCACCCTCAGCAAGCCTTGAAAGCAACGTGTAC
AACTTTGGCGTATTATTATTTGAAATGGTAACGGGTAGGCTCCCTTATTT
GGTGGACAACGGCTCTCTAGAAGACTGGGCAGCTGATTATTTGAGTGGAG
TGCCACCCCTTCAACAATTTGTTGATCCAACTTTAACCTCTTT
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