FC928661
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC928661 vs. ExPASy Swiss-Prot
Match: NDK2_TOBAC (Nucleoside diphosphate kinase 2, chloroplastic OS=Nicotiana tabacum GN=NDPK2 PE=1 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 1.012e-47 Identity = 87/108 (80.56%), Postives = 98/108 (90.74%), Query Frame = 2 Query: 29 LAKLFQGLRRRGFKLTGLKLFQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLHAEPGTIRGDLAVQTGRNVFHGSDSPENGKR 352 + ++ ++GFKLTGLKLF CPK+LAEEHYKDL SKPFFPKLI+YITSGPVVCMAWEG GVVASARKLIG+T+PL+AEPGTIRGDLAVQTGRNV HGSDSP+NGKR Sbjct: 101 VGEIISRFEKKGFKLTGLKLFHCPKELAEEHYKDLQSKPFFPKLIDYITSGPVVCMAWEGVGVVASARKLIGATNPLNAEPGTIRGDLAVQTGRNVVHGSDSPDNGKR 208
BLAST of FC928661 vs. ExPASy Swiss-Prot
Match: NDK2_ARATH (Nucleoside diphosphate kinase II, chloroplastic OS=Arabidopsis thaliana GN=NDPK2 PE=1 SV=2) HSP 1 Score: 184.496 bits (467), Expect = 1.462e-46 Identity = 85/108 (78.70%), Postives = 95/108 (87.96%), Query Frame = 2 Query: 29 LAKLFQGLRRRGFKLTGLKLFQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLHAEPGTIRGDLAVQTGRNVFHGSDSPENGKR 352 + ++ ++GFKL GLK+FQCPK+LAEEHYKDL++K FFP LIEYITSGPVVCMAWEG GVVASARKLIG TDPL AEPGTIRGDLAVQTGRN+ HGSDSPENGKR Sbjct: 100 VGEIISRFEKKGFKLIGLKMFQCPKELAEEHYKDLSAKSFFPNLIEYITSGPVVCMAWEGVGVVASARKLIGKTDPLQAEPGTIRGDLAVQTGRNIVHGSDSPENGKR 207
BLAST of FC928661 vs. ExPASy Swiss-Prot
Match: NDK2_PEA (Nucleoside diphosphate kinase 2, chloroplastic OS=Pisum sativum GN=NDPK2 PE=1 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 2.334e-44 Identity = 83/108 (76.85%), Postives = 92/108 (85.19%), Query Frame = 2 Query: 29 LAKLFQGLRRRGFKLTGLKLFQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLHAEPGTIRGDLAVQTGRNVFHGSDSPENGKR 352 + ++ ++GFKLTGLKLFQC K+LAEEHYK LN K FFPKLIEYITSGPVV MAWEG GVV SARKLIG+TDPL AEPGTIRGD AVQTGRN+ HGSDSPENG+R Sbjct: 99 VGEIISRFEKKGFKLTGLKLFQCSKELAEEHYKHLNQKSFFPKLIEYITSGPVVSMAWEGVGVVPSARKLIGATDPLQAEPGTIRGDFAVQTGRNIIHGSDSPENGER 206
BLAST of FC928661 vs. ExPASy Swiss-Prot
Match: NDK2_SPIOL (Nucleoside diphosphate kinase 2, chloroplastic OS=Spinacia oleracea GN=NDPK2 PE=1 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 6.791e-44 Identity = 80/108 (74.07%), Postives = 94/108 (87.04%), Query Frame = 2 Query: 29 LAKLFQGLRRRGFKLTGLKLFQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLHAEPGTIRGDLAVQTGRNVFHGSDSPENGKR 352 + ++ ++GFKL GLK++ CPK+LAEEHYKDL +K F+ KLI+YITSGPVVCMAWEG GVVAS+RKLIG+TDPL AEPGTIRGDLAVQTGRNV HGSDSP+NGKR Sbjct: 102 VGEIISRFEKKGFKLIGLKMYPCPKELAEEHYKDLKAKSFYQKLIDYITSGPVVCMAWEGVGVVASSRKLIGATDPLQAEPGTIRGDLAVQTGRNVVHGSDSPDNGKR 209
BLAST of FC928661 vs. ExPASy Swiss-Prot
Match: NDK_THEEB (Nucleoside diphosphate kinase OS=Thermosynechococcus elongatus (strain BP-1) GN=ndk PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 6.522e-36 Identity = 64/105 (60.95%), Postives = 82/105 (78.10%), Query Frame = 2 Query: 38 LFQGLRRRGFKLTGLKLFQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLHAEPGTIRGDLAVQTGRNVFHGSDSPENGKR 352 + Q ++G+ L GLKL + ++LAE+HY + KPFFP L+ +ITSGPVV M WEG GV+A+ARKLIG+T+PL+AEPGT+RGD AV GRNV HGSDSPEN +R Sbjct: 21 IIQRFEQKGYTLVGLKLMRVSRELAEQHYGEHKDKPFFPGLVNFITSGPVVAMVWEGRGVIANARKLIGATNPLNAEPGTLRGDFAVDVGRNVIHGSDSPENAER 125 HSP 2 Score: 28.8758 bits (63), Expect = 6.522e-36 Identity = 13/20 (65.00%), Postives = 14/20 (70.00%), Query Frame = 1 Query: 1 KPDAFQGGQVGEIISRFEKK 60 KPD Q G VG II RFE+K Sbjct: 9 KPDGVQRGLVGTIIQRFEQK 28
BLAST of FC928661 vs. ExPASy Swiss-Prot
Match: NDK_SYNPX (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain WH8102) GN=ndk PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 4.835e-33 Identity = 63/98 (64.29%), Postives = 74/98 (75.51%), Query Frame = 2 Query: 56 RRGFKLTGLKLFQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLHAEPGTIRGDLAVQTGRNVFHGSDSPENGK 349 R+GFKL GLK + LAE+HY +PFF L+++ITSGPVV M WEG GV+ASARKLIG+T PL AEPGTIRGDLAV GRNV HGSD+PE + Sbjct: 28 RKGFKLVGLKQITPSRALAEQHYGVHKERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDAPETAE 125 HSP 2 Score: 30.8018 bits (68), Expect = 4.835e-33 Identity = 13/20 (65.00%), Postives = 15/20 (75.00%), Query Frame = 1 Query: 1 KPDAFQGGQVGEIISRFEKK 60 KPD Q G VGEI+ RFE+K Sbjct: 10 KPDGVQRGLVGEILGRFERK 29
BLAST of FC928661 vs. ExPASy Swiss-Prot
Match: NDK_CYAP4 (Nucleoside diphosphate kinase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=ndk PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 7.044e-33 Identity = 63/108 (58.33%), Postives = 81/108 (75.00%), Query Frame = 2 Query: 29 LAKLFQGLRRRGFKLTGLKLFQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLHAEPGTIRGDLAVQTGRNVFHGSDSPENGKR 352 + ++ + +GFKL GLKL KDLAE+HY + KPFFP L+++ITSGPVV M WEG GVVASARK+IG+T+PL++EPGTIRGD V GRN+ HGSD+ E +R Sbjct: 18 VGEIIRRFEAKGFKLVGLKLMNVSKDLAEQHYGEHKEKPFFPGLVQFITSGPVVAMVWEGKGVVASARKIIGATNPLNSEPGTIRGDYGVDIGRNIIHGSDAVETAQR 125
BLAST of FC928661 vs. ExPASy Swiss-Prot
Match: NDK_PROMM (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9313) GN=ndk PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.067e-32 Identity = 62/98 (63.27%), Postives = 73/98 (74.49%), Query Frame = 2 Query: 56 RRGFKLTGLKLFQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLHAEPGTIRGDLAVQTGRNVFHGSDSPENGK 349 R+GFKL GLK +DLA EHY +PFF L+++ITSGPV+ M WEG GV+ASARKLIG+T PL AEPGTIRGDLAV GRNV HGSD P+ + Sbjct: 29 RKGFKLVGLKQVTPSRDLAGEHYGVHRERPFFAGLVDFITSGPVIAMVWEGDGVIASARKLIGATKPLDAEPGTIRGDLAVNIGRNVIHGSDGPDTAQ 126 HSP 2 Score: 30.8018 bits (68), Expect = 1.067e-32 Identity = 13/20 (65.00%), Postives = 15/20 (75.00%), Query Frame = 1 Query: 1 KPDAFQGGQVGEIISRFEKK 60 KPD Q G VGEI+ RFE+K Sbjct: 11 KPDGVQRGLVGEILGRFERK 30
BLAST of FC928661 vs. ExPASy Swiss-Prot
Match: NDK_SYNS9 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain CC9902) GN=ndk PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.391e-32 Identity = 63/98 (64.29%), Postives = 73/98 (74.49%), Query Frame = 2 Query: 56 RRGFKLTGLKLFQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLHAEPGTIRGDLAVQTGRNVFHGSDSPENGK 349 R+GFKL GLK + LAEEHY +PFF L+ +ITSGPVV M WEG GV+ASARKLIG+T PL +EPGTIRGDLAV GRNV HGSD+PE + Sbjct: 28 RKGFKLVGLKQITPSRALAEEHYGVHKERPFFAGLVGFITSGPVVAMVWEGDGVIASARKLIGATKPLESEPGTIRGDLAVNIGRNVIHGSDAPETAE 125 HSP 2 Score: 30.8018 bits (68), Expect = 1.391e-32 Identity = 13/20 (65.00%), Postives = 15/20 (75.00%), Query Frame = 1 Query: 1 KPDAFQGGQVGEIISRFEKK 60 KPD Q G VGEI+ RFE+K Sbjct: 10 KPDGVQRGLVGEILGRFERK 29
BLAST of FC928661 vs. ExPASy Swiss-Prot
Match: NDK_SYNSC (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain CC9605) GN=ndk PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.003e-32 Identity = 62/98 (63.27%), Postives = 73/98 (74.49%), Query Frame = 2 Query: 56 RRGFKLTGLKLFQCPKDLAEEHYKDLNSKPFFPKLIEYITSGPVVCMAWEGAGVVASARKLIGSTDPLHAEPGTIRGDLAVQTGRNVFHGSDSPENGK 349 R+GFKL GLK + LAE+HY +PFF L+++ITSGPVV M WEG GV+ASARKLIG+T PL AEPGTIRGDLAV GRNV HGSD+ E + Sbjct: 28 RKGFKLVGLKQITPSRALAEQHYGVHKERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDAAETAQ 125 HSP 2 Score: 30.8018 bits (68), Expect = 4.003e-32 Identity = 13/20 (65.00%), Postives = 15/20 (75.00%), Query Frame = 1 Query: 1 KPDAFQGGQVGEIISRFEKK 60 KPD Q G VGEI+ RFE+K Sbjct: 10 KPDGVQRGLVGEILGRFERK 29 The following BLAST results are available for this feature:
BLAST of FC928661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC928661 ID=FC928661; Name=FC928661; organism=Citrus clementina; type=EST; length=354bpback to top |