FC928902
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC928902 vs. ExPASy Swiss-Prot
Match: RNF5_CAEEL (RING finger protein 5 OS=Caenorhabditis elegans GN=rnf-5 PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.013e-28 Identity = 85/255 (33.33%), Postives = 114/255 (44.71%), Query Frame = 1 Query: 112 TSRSAQNPYSNNNSNSEAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWLHGHSNYRECPVCKATIEEEKLVPLYGRGKSSTDPRSKSIPGVNIPNRPTGQRPETAPPPEPSHXXXXXXXXXXXXXXXXXXXXXXRFGNFTLSAAFGGLIPPLFNLQVHGFPDPTMYGPAASFPYGFTNSFHG----------------------------GHAHGYPQH-------TGQGQQDYYLKRLLLFIGFCVLLVLIW 771 T ++ P S++N + E+ FECNIC D A+D +V+LCGHLFCWPCL +WL N + CPVCK+ I+ K+VP+YGRG S+DPR K +P RP GQR E P P FG T++ GL P +F L P + G FP F SF G GH HG H + Q++ YL + +IGF +L L++ Sbjct: 5 TKAPSEEPTSSSNKD-ESARFECNICLDAAKDAVVSLCGHLFCWPCLSQWLDTRPNNQVCPVCKSAIDGNKVVPIYGRGGDSSDPRKK------VPPRPKGQRSE----PPPQSFAGFNWGGDGGMMGGGGPNVHFSFGIGTVN----GLFPLMFML-------PFIQG---IFPLSFVASFFGNGNQGAAAAGGGNGGGNDGNDGTHAHTHGHTHGPRGHGESAAPGSRMAQEEEYLSNIFKYIGFFMLFWLLF 234
BLAST of FC928902 vs. ExPASy Swiss-Prot
Match: RN185_DANRE (RING finger protein 185 OS=Danio rerio GN=rnf185 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.559e-27 Identity = 83/239 (34.73%), Postives = 109/239 (45.61%), Query Frame = 1 Query: 91 ASSFGESTSRSAQNPYSNNNSNSEAGN-------FECNICFDLAQDPIVTLCGHLFCWPCLYKWLHGHSNYRECPVCKATIEEEKLVPLYGRGKS-STDPRSKSIPGVNIPNRPTGQRPETAPPPEPSHXXXXXXXXXXXXXXXXXXXXXXRFGNFTLSAAFG----GLIPPLFNLQVHGFPDPTMYGPAASFPYGFTNSFHGGHAHGYPQHTGQGQQDYYLKRLLLFIGFCVLLVLIW 771 A+S S+S S+ +N S E+G FECNIC D ++D +++LCGHLFCWPCL++WL N + CPVCKA I +K++PLYGRG + DPR K+ P RP GQRPE PE G F +S G G+ FN+ G P P A G PQHT + +L RL LF+ LL++ W Sbjct: 5 AASESSSSSSSSSAGAANGQSAGESGGGGAQDSTFECNICLDTSKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKT------PPRPQGQRPE----PENRGGFQGFGFGD---------------GGFQMSFGIGAFPFGIFATAFNIN-DGRPPPA--------------------APGTPQHT----DEQFLSRLFLFV---ALLIMFW 190
BLAST of FC928902 vs. ExPASy Swiss-Prot
Match: RN185_RAT (RING finger protein 185 OS=Rattus norvegicus GN=Rnf185 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.238e-26 Identity = 59/121 (48.76%), Postives = 76/121 (62.81%), Query Frame = 1 Query: 94 SSFGESTSRSAQN-----PYSNNNSNSEAGN----FECNICFDLAQDPIVTLCGHLFCWPCLYKWLHGHSNYRECPVCKATIEEEKLVPLYGRGKS-STDPRSKSIPGVNIPNRPTGQRPE 426 +S G S S S +N P ++N E+G FECNIC D A+D +++LCGHLFCWPCL++WL N + CPVCKA I +K++PLYGRG + DPR K+ P RP GQRPE Sbjct: 2 ASKGPSASASTENSSAGGPSGSSNGTGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKT------PPRPQGQRPE 116
BLAST of FC928902 vs. ExPASy Swiss-Prot
Match: RN185_MOUSE (RING finger protein 185 OS=Mus musculus GN=Rnf185 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.238e-26 Identity = 59/121 (48.76%), Postives = 76/121 (62.81%), Query Frame = 1 Query: 94 SSFGESTSRSAQN-----PYSNNNSNSEAGN----FECNICFDLAQDPIVTLCGHLFCWPCLYKWLHGHSNYRECPVCKATIEEEKLVPLYGRGKS-STDPRSKSIPGVNIPNRPTGQRPE 426 +S G S S S +N P ++N E+G FECNIC D A+D +++LCGHLFCWPCL++WL N + CPVCKA I +K++PLYGRG + DPR K+ P RP GQRPE Sbjct: 2 ASKGPSASASTENSNAGGPSGSSNGTGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKT------PPRPQGQRPE 116
BLAST of FC928902 vs. ExPASy Swiss-Prot
Match: RN185_PONAB (RING finger protein 185 OS=Pongo abelii GN=RNF185 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.759e-26 Identity = 59/121 (48.76%), Postives = 76/121 (62.81%), Query Frame = 1 Query: 94 SSFGESTSRSAQN-----PYSNNNSNSEAGN----FECNICFDLAQDPIVTLCGHLFCWPCLYKWLHGHSNYRECPVCKATIEEEKLVPLYGRGKS-STDPRSKSIPGVNIPNRPTGQRPE 426 +S G S S S +N P ++N E+G FECNIC D A+D +++LCGHLFCWPCL++WL N + CPVCKA I +K++PLYGRG + DPR K+ P RP GQRPE Sbjct: 2 ASKGPSASSSPENSSAGGPSGSSNGAGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKT------PPRPQGQRPE 116
BLAST of FC928902 vs. ExPASy Swiss-Prot
Match: RN185_HUMAN (RING finger protein 185 OS=Homo sapiens GN=RNF185 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.759e-26 Identity = 59/121 (48.76%), Postives = 76/121 (62.81%), Query Frame = 1 Query: 94 SSFGESTSRSAQN-----PYSNNNSNSEAGN----FECNICFDLAQDPIVTLCGHLFCWPCLYKWLHGHSNYRECPVCKATIEEEKLVPLYGRGKS-STDPRSKSIPGVNIPNRPTGQRPE 426 +S G S S S +N P ++N E+G FECNIC D A+D +++LCGHLFCWPCL++WL N + CPVCKA I +K++PLYGRG + DPR K+ P RP GQRPE Sbjct: 2 ASKGPSASASPENSSAGGPSGSSNGAGESGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKT------PPRPQGQRPE 116
BLAST of FC928902 vs. ExPASy Swiss-Prot
Match: RN185_CHICK (RING finger protein 185 OS=Gallus gallus GN=RNF185 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.706e-26 Identity = 56/112 (50.00%), Postives = 74/112 (66.07%), Query Frame = 1 Query: 94 SSFGESTSRSAQNPYSNNNSNSEAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWLHGHSNYRECPVCKATIEEEKLVPLYGRGKS-STDPRSKSIPGVNIPNRPTGQRPE 426 SS TS S+ + + +N+N + FECNIC D A+D +++LCGHLFCWPCL++WL N + CPVCKA I +K++PLYGRG + DPR K+ P RP GQRPE Sbjct: 14 SSSTGGTSGSSSSNGAGDNTNQD-NTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKT------PPRPQGQRPE 118
BLAST of FC928902 vs. ExPASy Swiss-Prot
Match: RNF5_RAT (E3 ubiquitin-protein ligase RNF5 OS=Rattus norvegicus GN=Rnf5 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.729e-23 Identity = 48/95 (50.53%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 142 NNNSNSEAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWLHGHSNYRECPVCKATIEEEKLVPLYGRG-KSSTDPRSKSIPGVNIPNRPTGQRP 423 N + FECNIC + A++ +V++CGHL+CWPCL++WL + +ECPVCKA I EK+VPLYGRG + DPR K+ P RP GQRP Sbjct: 15 NRERGGASATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPDRQECPVCKAGISREKVVPLYGRGSQKPQDPRLKT------PPRPQGQRP 103
BLAST of FC928902 vs. ExPASy Swiss-Prot
Match: RNF5_MOUSE (E3 ubiquitin-protein ligase RNF5 OS=Mus musculus GN=Rnf5 PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.729e-23 Identity = 48/95 (50.53%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 142 NNNSNSEAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWLHGHSNYRECPVCKATIEEEKLVPLYGRG-KSSTDPRSKSIPGVNIPNRPTGQRP 423 N + FECNIC + A++ +V++CGHL+CWPCL++WL + +ECPVCKA I EK+VPLYGRG + DPR K+ P RP GQRP Sbjct: 15 NRERGGASATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPDRQECPVCKAGISREKVVPLYGRGSQKPQDPRLKT------PPRPQGQRP 103
BLAST of FC928902 vs. ExPASy Swiss-Prot
Match: RNF5_HUMAN (E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens GN=RNF5 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.870e-23 Identity = 51/99 (51.52%), Postives = 64/99 (64.65%), Query Frame = 1 Query: 133 PYSNNNSNSEAG-NFECNICFDLAQDPIVTLCGHLFCWPCLYKWLHGHSNYRECPVCKATIEEEKLVPLYGRG-KSSTDPRSKSIPGVNIPNRPTGQRP 423 P N AG FECNIC + A++ +V++CGHL+CWPCL++WL +ECPVCKA I EK+VPLYGRG + DPR K+ P RP GQRP Sbjct: 11 PEGPNRERGGAGATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISREKVVPLYGRGSQKPQDPRLKT------PPRPQGQRP 103 The following BLAST results are available for this feature:
BLAST of FC928902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC928902 ID=FC928902; Name=FC928902; organism=Citrus clementina; type=EST; length=885bpback to top |