FC929507
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929507 vs. ExPASy Swiss-Prot
Match: TT12_ARATH (Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.398e-50 Identity = 98/208 (47.12%), Postives = 136/208 (65.38%), Query Frame = -1 Query: 175 MGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSLSI 798 M SAV+T+CGQAYGA +Y +GI QR+ VL + +T LY +S PIL +G+S IA +F G+IPQI+A+AL P+Q+FLQAQ+IV P AY+S ++H LL+W+ SWW++V +YI+ S CK TW GF+ +AF G+ +FKL+ ASAVMLCLE WY Q LV+++GLL NP ++LD++SI Sbjct: 109 MASAVQTVCGQAYGARQYSSMGIICQRAMVLHLAAAVFLTFLYWYSGPILKTMGQSVAIAHEGQIFARGMIPQIYAFALACPMQRFLQAQNIVNPLAYMSLGVFLLHTLLTWLVTNVLDFGLLGAALILSFSWWLLVAVNGMYILMSPNCKETWTGFSTRAFRGIWPYFKLTVASAVMLCLEIWYNQGLVIISGLLSNPTISLDAISI 316
BLAST of FC929507 vs. ExPASy Swiss-Prot
Match: YAO6_SCHPO (Uncharacterized transporter C11D3.06 OS=Schizosaccharomyces pombe GN=SPAC11D3.06 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.819e-19 Identity = 61/206 (29.61%), Postives = 106/206 (51.46%), Query Frame = -1 Query: 181 SAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWI--VVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSL 792 +A +TL +GA K + LGI LQ ++L++ + + +++ +S+PILIFL ++P++A ++ F+ LIP Y ++KFLQ Q I +YI T +++ L+++ V+ S+W+ +++ Q+ VK W G+ + F KLS VM+ E W F+I+ L+AG L LA S+ Sbjct: 67 TAFDTLGSNLWGAGKKQELGILLQTGFIVLSILYLPICLVWWYSKPILIFLHQTPELAEASQKFLRYLIPGGLGYVCFELLKKFLQTQEITRAGSYILLVTSPLNVALNFLLVHYYGLGLKGAPLATGLSYWLSFILLTQYAKYVKG---AEAWNGWNKRCLENFGPFVKLSLLGIVMVGTEWWAFEIVALVAGKLGAVPLAAQSV 269
BLAST of FC929507 vs. ExPASy Swiss-Prot
Match: S47A1_RABIT (Multidrug and toxin extrusion protein 1 OS=Oryctolagus cuniculus GN=SLC47A1 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.819e-19 Identity = 57/207 (27.54%), Postives = 106/207 (51.21%), Query Frame = -1 Query: 178 MGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSLS 798 + SA +TL Q YG+ + +G+ LQR +++L L + L++ ++ IL+ + P ++ +V IP + A L K+L Q IV P A +V+ L +++ VY+ + + + + F+YI++S + TW G++++ SFF+L+ S +MLC+E W ++I L+G+L EL S++ Sbjct: 91 LSSACDTLISQTYGSRNLKHVGVILQRGSLILLLCCLPCWALFLNTQHILLLFRQDPAVSRLTQTYVTIFIPALPATFLYTLQVKYLLNQGIVLPQVVTGVAANLVNALANYLFVYQLHLGVMGSALANTVAQFTLALLLFLYILRSKVYQATWGGWSLECLQDWASFFRLAIPSMLMLCMEWWAYEIGSFLSGILGMVELGAQSVT 297
BLAST of FC929507 vs. ExPASy Swiss-Prot
Match: S47A1_XENTR (Multidrug and toxin extrusion protein 1 OS=Xenopus tropicalis GN=slc47a1 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.026e-19 Identity = 56/206 (27.18%), Postives = 101/206 (49.03%), Query Frame = -1 Query: 181 MGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSL 798 + A +TL Q +G + +++GI LQR ++L L L + + IL+ + P+++ ++V +P + A L + K+LQ Q I+ P + + L +++ +Y S +I +I F+YIV TW G++ F +F +L+ AS +MLC+E W F+I + LAG+L +LA ++ Sbjct: 106 LAGACDTLISQTFGGSNLKLVGIILQRGILILLLFCFPCWALLINTESILLLFRQDPEVSKLTQIYVLIFLPALPAAFLYQLLAKYLQNQGIIYPQVLTGFIANIFNALFNYILLYVLGLGVMGSACANTVSQFIQMILLFLYIVWRRLYADTWGGWSQACFEEWGAFIRLAVASMLMLCIEWWAFEISMFLAGVLGMVDLAAQAI 311
BLAST of FC929507 vs. ExPASy Swiss-Prot
Match: S47A1_HUMAN (Multidrug and toxin extrusion protein 1 OS=Homo sapiens GN=SLC47A1 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.011e-18 Identity = 56/206 (27.18%), Postives = 103/206 (50.00%), Query Frame = -1 Query: 181 MGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSL 798 + SA +TL Q YG+ + +G+ LQRSA++L L L++ ++ IL+ + PD++ +V IP + A L K+L Q IV P A +V+ L +++ +++ S + + + F+YI+ + TW G++++ SF +L+ S +MLC+E W +++ L+G+L EL S+ Sbjct: 92 LSSACDTLISQTYGSQNLKHVGVILQRSALVLLLCCFPCWALFLNTQHILLLFRQDPDVSRLTQTYVTIFIPALPATFLYMLQVKYLLNQGIVLPQIVTGVAANLVNALANYLFLHQLHLGVIGSALANLISQYTLALLLFLYILGKKLHQATWGGWSLECLQDWASFLRLAIPSMLMLCMEWWAYEVGSFLSGILGMVELGAQSI 297
BLAST of FC929507 vs. ExPASy Swiss-Prot
Match: S47A1_DANRE (Multidrug and toxin extrusion protein 1 OS=Danio rerio GN=slc47a1 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.430e-18 Identity = 58/207 (28.02%), Postives = 108/207 (52.17%), Query Frame = -1 Query: 181 MGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQ-KFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSL 798 + SA +TL Q +G+N + +G+ LQR ++L L L + + PIL+ + +SP++AS + ++V +P + A A + +Q ++LQ Q I+ P A +++ L+++V ++ S + + + +VYI + K TW G++ +F +L+ S +MLC+E W ++I LAGL+ EL S+ Sbjct: 110 LASACDTLISQTFGSNNLKRVGVILQRGILILLLACFPCWALLINTEPILLAVRQSPNVASLSQLYVKIFMPALPA-AFMYQLQGRYLQNQGIIWPQVITGAAGNILNALINYVFLHLLELGVAGSAAANTISQYSLAVFLYVYIRWKNLHKATWDGWSRDCLQEWGAFIRLALPSMLMLCVEWWTYEIGGFLAGLISETELGAQSV 315
BLAST of FC929507 vs. ExPASy Swiss-Prot
Match: S47A1_PONAB (Multidrug and toxin extrusion protein 1 OS=Pongo abelii GN=SLC47A1 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.479e-18 Identity = 56/206 (27.18%), Postives = 101/206 (49.03%), Query Frame = -1 Query: 181 MGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSL 798 + SA +TL Q YG+ + +G+ LQRSA++L L L++ ++ IL+ + PD++ +V IP + A L K+L Q IV P A +V+ L +++ +++ S + + + F YI+ + TW G++++ SF L+ S +MLC+E W +++ L+G+L EL S+ Sbjct: 92 LSSACDTLISQTYGSQNLKHVGVILQRSALILLLCCFPCWALFLNTQHILLLFRQDPDVSRLTQTYVTIFIPALPATFLYMLQVKYLLNQGIVLPQIVTGVAANLVNALANYLFLHQLHLGAIGSALANLISQYTLALLLFFYILGKKLHQATWGGWSLECLQDWASFLHLAVPSMLMLCMEWWAYEVGSFLSGILGMVELGAQSI 297
BLAST of FC929507 vs. ExPASy Swiss-Prot
Match: S47A2_MOUSE (Multidrug and toxin extrusion protein 2 OS=Mus musculus GN=Slc47a2 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.850e-18 Identity = 59/207 (28.50%), Postives = 104/207 (50.24%), Query Frame = -1 Query: 181 MGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQ-KFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSL 798 + SA +TL Q++G + +G+ LQR ++L L +++ + +L+ L + PD+A A V+V IP + A A F +Q ++LQ+Q I+ P + A VV++ ++ +Y S + + F+Y+ HTW G+T + F S+ +L+ S M+C+E W F+I LAGL+ EL ++ Sbjct: 101 LASACDTLMSQSFGGKNLKRVGVILQRGILILLLCCFPCWAIFLNTERLLLLLRQDPDVARLAQVYVMICIPALPA-AFLFQLQTRYLQSQGIIMPQVIVGIAANVVNVGMNAFLLYALDLGVVGSAWANTTSQFFLSALLFLYVWWKRIHIHTWGGWTRECFQEWSSYTRLAIPSMFMVCIEWWTFEIGTFLAGLVNVTELGAQAV 306
BLAST of FC929507 vs. ExPASy Swiss-Prot
Match: S47A1_MOUSE (Multidrug and toxin extrusion protein 1 OS=Mus musculus GN=Slc47a1 PE=1 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 1.303e-17 Identity = 57/207 (27.54%), Postives = 99/207 (47.83%), Query Frame = -1 Query: 178 MGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSLS 798 + SA +TL Q YG+ + +G+ LQR ++L L L++ + IL+ + PD++ +V IP + A L K+L Q IV P A +V+ L ++V +Y S + + I F+YI+ + TW G++ + SF +L+ S +MLC+E W +++ L+G+L EL S++ Sbjct: 92 LSSACDTLISQTYGSQNLKHVGVILQRGTLILLLCCFPCWALFINTEQILLLFRQDPDVSRLTQTYVMIFIPALPAAFLYTLQVKYLLNQGIVLPQIMTGIAANLVNALANYVFLYHLHLGVMGSALANTISQFALAIFLFLYILWRRLHQATWGGWSWECLQDWASFLRLAIPSMLMLCIEWWAYEVGSFLSGILGMVELGAQSIT 298
BLAST of FC929507 vs. ExPASy Swiss-Prot
Match: S47A1_RAT (Multidrug and toxin extrusion protein 1 OS=Rattus norvegicus GN=Slc47a1 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.468e-17 Identity = 55/207 (26.57%), Postives = 99/207 (47.83%), Query Frame = -1 Query: 178 MGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSLS 798 + SA +TL Q YG+ + +G+ LQR ++L L L++ + IL+ + PD++ +V IP + A L K+L Q IV P A +V+ L +++ +++ S + + I F+YI+ TW G++ + SF +L+ S +MLC+E W +++ L+G+L EL S++ Sbjct: 91 LSSACDTLISQTYGSQNLKHVGVILQRGTLILLLCCFPCWALFINTEQILLLFRQDPDVSRLTQTYVMVFIPALPAAFLYTLQVKYLLNQGIVLPQVITGIAANLVNALANYLFLHQLHLGVMGSALANTISQFALAIFLFLYILWRKLHHATWGGWSWECLQDWASFLQLAIPSMLMLCIEWWAYEVGSFLSGILGMVELGAQSIT 297 The following BLAST results are available for this feature:
BLAST of FC929507 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929507 ID=FC929507; Name=FC929507; organism=Citrus clementina; type=EST; length=858bpback to top |