FC929710
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929710 vs. ExPASy Swiss-Prot
Match: TT12_ARATH (Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.754e-47 Identity = 93/201 (46.27%), Postives = 130/201 (64.68%), Query Frame = -3 Query: 175 LCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSLSI 777 +CGQAYGA +Y +GI QR+ VL + +T LY +S PIL +G+S IA +F G+IPQI+A+AL P+Q+FLQAQ+IV P AY+S ++H LL+W+ SWW++V +YI+ S CK TW GF+ +AF G+ +FKL+ ASAVMLCLE WY Q LV+++GLL NP ++LD++SI Sbjct: 116 VCGQAYGARQYSSMGIICQRAMVLHLAAAVFLTFLYWYSGPILKTMGQSVAIAHEGQIFARGMIPQIYAFALACPMQRFLQAQNIVNPLAYMSLGVFLLHTLLTWLVTNVLDFGLLGAALILSFSWWLLVAVNGMYILMSPNCKETWTGFSTRAFRGIWPYFKLTVASAVMLCLEIWYNQGLVIISGLLSNPTISLDAISI 316
BLAST of FC929710 vs. ExPASy Swiss-Prot
Match: YAO6_SCHPO (Uncharacterized transporter C11D3.06 OS=Schizosaccharomyces pombe GN=SPAC11D3.06 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.918e-18 Identity = 58/196 (29.59%), Postives = 101/196 (51.53%), Query Frame = -3 Query: 181 YGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWI--VVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSL 762 +GA K + LGI LQ ++L++ + + +++ +S+PILIFL ++P++A ++ F+ LIP Y ++KFLQ Q I +YI T +++ L+++ V+ S+W+ +++ Q+ VK W G+ + F KLS VM+ E W F+I+ L+AG L LA S+ Sbjct: 77 WGAGKKQELGILLQTGFIVLSILYLPICLVWWYSKPILIFLHQTPELAEASQKFLRYLIPGGLGYVCFELLKKFLQTQEITRAGSYILLVTSPLNVALNFLLVHYYGLGLKGAPLATGLSYWLSFILLTQYAKYVKG---AEAWNGWNKRCLENFGPFVKLSLLGIVMVGTEWWAFEIVALVAGKLGAVPLAAQSV 269
BLAST of FC929710 vs. ExPASy Swiss-Prot
Match: S47A1_RABIT (Multidrug and toxin extrusion protein 1 OS=Oryctolagus cuniculus GN=SLC47A1 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.109e-17 Identity = 54/200 (27.00%), Postives = 101/200 (50.50%), Query Frame = -3 Query: 178 LCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSLS 777 L Q YG+ + +G+ LQR +++L L + L++ ++ IL+ + P ++ +V IP + A L K+L Q IV P A +V+ L +++ VY+ + + + + F+YI++S + TW G++++ SFF+L+ S +MLC+E W ++I L+G+L EL S++ Sbjct: 98 LISQTYGSRNLKHVGVILQRGSLILLLCCLPCWALFLNTQHILLLFRQDPAVSRLTQTYVTIFIPALPATFLYTLQVKYLLNQGIVLPQVVTGVAANLVNALANYLFVYQLHLGVMGSALANTVAQFTLALLLFLYILRSKVYQATWGGWSLECLQDWASFFRLAIPSMLMLCMEWWAYEIGSFLSGILGMVELGAQSVT 297
BLAST of FC929710 vs. ExPASy Swiss-Prot
Match: S47A1_XENTR (Multidrug and toxin extrusion protein 1 OS=Xenopus tropicalis GN=slc47a1 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.891e-17 Identity = 54/199 (27.14%), Postives = 97/199 (48.74%), Query Frame = -3 Query: 181 LCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSL 777 L Q +G + +++GI LQR ++L L L + + IL+ + P+++ ++V +P + A L + K+LQ Q I+ P + + L +++ +Y S +I +I F+YIV TW G++ F +F +L+ AS +MLC+E W F+I + LAG+L +LA ++ Sbjct: 113 LISQTFGGSNLKLVGIILQRGILILLLFCFPCWALLINTESILLLFRQDPEVSKLTQIYVLIFLPALPAAFLYQLLAKYLQNQGIIYPQVLTGFIANIFNALFNYILLYVLGLGVMGSACANTVSQFIQMILLFLYIVWRRLYADTWGGWSQACFEEWGAFIRLAVASMLMLCIEWWAFEISMFLAGVLGMVDLAAQAI 311
BLAST of FC929710 vs. ExPASy Swiss-Prot
Match: S47A1_HUMAN (Multidrug and toxin extrusion protein 1 OS=Homo sapiens GN=SLC47A1 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.226e-16 Identity = 53/199 (26.63%), Postives = 98/199 (49.25%), Query Frame = -3 Query: 181 LCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSL 777 L Q YG+ + +G+ LQRSA++L L L++ ++ IL+ + PD++ +V IP + A L K+L Q IV P A +V+ L +++ +++ S + + + F+YI+ + TW G++++ SF +L+ S +MLC+E W +++ L+G+L EL S+ Sbjct: 99 LISQTYGSQNLKHVGVILQRSALVLLLCCFPCWALFLNTQHILLLFRQDPDVSRLTQTYVTIFIPALPATFLYMLQVKYLLNQGIVLPQIVTGVAANLVNALANYLFLHQLHLGVIGSALANLISQYTLALLLFLYILGKKLHQATWGGWSLECLQDWASFLRLAIPSMLMLCMEWWAYEVGSFLSGILGMVELGAQSI 297
BLAST of FC929710 vs. ExPASy Swiss-Prot
Match: S47A1_DANRE (Multidrug and toxin extrusion protein 1 OS=Danio rerio GN=slc47a1 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.091e-16 Identity = 55/200 (27.50%), Postives = 103/200 (51.50%), Query Frame = -3 Query: 181 LCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQ-KFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSL 777 L Q +G+N + +G+ LQR ++L L L + + PIL+ + +SP++AS + ++V +P + A A + +Q ++LQ Q I+ P A +++ L+++V ++ S + + + +VYI + K TW G++ +F +L+ S +MLC+E W ++I LAGL+ EL S+ Sbjct: 117 LISQTFGSNNLKRVGVILQRGILILLLACFPCWALLINTEPILLAVRQSPNVASLSQLYVKIFMPALPA-AFMYQLQGRYLQNQGIIWPQVITGAAGNILNALINYVFLHLLELGVAGSAAANTISQYSLAVFLYVYIRWKNLHKATWDGWSRDCLQEWGAFIRLALPSMLMLCVEWWTYEIGGFLAGLISETELGAQSV 315
BLAST of FC929710 vs. ExPASy Swiss-Prot
Match: S47A1_PONAB (Multidrug and toxin extrusion protein 1 OS=Pongo abelii GN=SLC47A1 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.731e-16 Identity = 53/199 (26.63%), Postives = 96/199 (48.24%), Query Frame = -3 Query: 181 LCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSL 777 L Q YG+ + +G+ LQRSA++L L L++ ++ IL+ + PD++ +V IP + A L K+L Q IV P A +V+ L +++ +++ S + + + F YI+ + TW G++++ SF L+ S +MLC+E W +++ L+G+L EL S+ Sbjct: 99 LISQTYGSQNLKHVGVILQRSALILLLCCFPCWALFLNTQHILLLFRQDPDVSRLTQTYVTIFIPALPATFLYMLQVKYLLNQGIVLPQIVTGVAANLVNALANYLFLHQLHLGAIGSALANLISQYTLALLLFFYILGKKLHQATWGGWSLECLQDWASFLHLAVPSMLMLCMEWWAYEVGSFLSGILGMVELGAQSI 297
BLAST of FC929710 vs. ExPASy Swiss-Prot
Match: S47A2_MOUSE (Multidrug and toxin extrusion protein 2 OS=Mus musculus GN=Slc47a2 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.566e-16 Identity = 56/200 (28.00%), Postives = 99/200 (49.50%), Query Frame = -3 Query: 181 LCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQ-KFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSL 777 L Q++G + +G+ LQR ++L L +++ + +L+ L + PD+A A V+V IP + A A F +Q ++LQ+Q I+ P + A VV++ ++ +Y S + + F+Y+ HTW G+T + F S+ +L+ S M+C+E W F+I LAGL+ EL ++ Sbjct: 108 LMSQSFGGKNLKRVGVILQRGILILLLCCFPCWAIFLNTERLLLLLRQDPDVARLAQVYVMICIPALPA-AFLFQLQTRYLQSQGIIMPQVIVGIAANVVNVGMNAFLLYALDLGVVGSAWANTTSQFFLSALLFLYVWWKRIHIHTWGGWTRECFQEWSSYTRLAIPSMFMVCIEWWTFEIGTFLAGLVNVTELGAQAV 306
BLAST of FC929710 vs. ExPASy Swiss-Prot
Match: S47A1_MOUSE (Multidrug and toxin extrusion protein 1 OS=Mus musculus GN=Slc47a1 PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 7.945e-16 Identity = 54/200 (27.00%), Postives = 94/200 (47.00%), Query Frame = -3 Query: 178 LCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSLS 777 L Q YG+ + +G+ LQR ++L L L++ + IL+ + PD++ +V IP + A L K+L Q IV P A +V+ L ++V +Y S + + I F+YI+ + TW G++ + SF +L+ S +MLC+E W +++ L+G+L EL S++ Sbjct: 99 LISQTYGSQNLKHVGVILQRGTLILLLCCFPCWALFINTEQILLLFRQDPDVSRLTQTYVMIFIPALPAAFLYTLQVKYLLNQGIVLPQIMTGIAANLVNALANYVFLYHLHLGVMGSALANTISQFALAIFLFLYILWRRLHQATWGGWSWECLQDWASFLRLAIPSMLMLCIEWWAYEVGSFLSGILGMVELGAQSIT 298
BLAST of FC929710 vs. ExPASy Swiss-Prot
Match: YJ2D_SCHPO (Uncharacterized transporter C4B3.13 OS=Schizosaccharomyces pombe GN=SPCC4B3.13 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.770e-15 Identity = 51/194 (26.29%), Postives = 95/194 (48.97%), Query Frame = -3 Query: 193 QAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYE--XXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELA 768 Q++G+ YEM+G++LQR +L L + +++ IL+FL + P AA ++ ++ AYAL +++FLQ Q I P YI + +++ L+++ V+ + W +YI+K + + W GF+ +A +L+ +M+C E W F+++ +G+L ELA Sbjct: 164 QSFGSGNYEMVGLHLQRILAILLLIQFPIFLIWWKIEGILLFLRQDPLTCMFAAKYMRVMMLASPAYALFEALKRFLQVQGIFHPVTYILAIVVPINIFLNYLFVWSPWVGFGFLGAPVAVALTLWSACAVLIIYIMKVNG-RQAWGGFSREALKNWGPLCRLAVPGVIMICSEYWAFELVTFASGVLGTTELA 356 The following BLAST results are available for this feature:
BLAST of FC929710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929710 ID=FC929710; Name=FC929710; organism=Citrus clementina; type=EST; length=779bpback to top |