FC929869

Overview
NameFC929869
Unique NameFC929869
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length692
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13706 contig Ccv1_Contig13706:776..1467. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_RAT (Eukaryotic translation initiation factor 2 subunit 3 OS=Rattus norvegicus GN=Eif2s3 PE=1 SV=2)

HSP 1 Score: 333.954 bits (855), Expect = 4.717e-91
Identity = 162/229 (70.74%), Postives = 196/229 (85.59%), Query Frame = 1
Query:    1 QENVAINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVKNDL 687
            +E+ A  Q+E I+ F+QGTVA+GAP++PISAQLKYNI+VVCEYIVKKIP+P R+F   P +IVIRSFDVNKPG EVDD++GGVAGGSIL+GVLKV Q IEVRPGIV KD  G + C PI+S+IVSLFAE N+LQ+A PGGLIGVGT +DPTL RADR+VGQVLG VG+LPE+F ELE+++FLLRRLLGVRT+G ++  KV KL+K E+LM+NIGS+STG RV AVK DL
Sbjct:  196 KESQAKEQYEQILAFVQGTVAEGAPIIPISAQLKYNIEVVCEYIVKKIPVPPRDFTSEPRLIVIRSFDVNKPGCEVDDLKGGVAGGSILKGVLKVGQEIEVRPGIVSKDSEGKLMCKPIFSKIVSLFAEHNDLQYAAPGGLIGVGTKIDPTLCRADRMVGQVLGAVGALPEIFTELEISYFLLRRLLGVRTEGDKKAAKVQKLSKNEVLMVNIGSLSTGGRVSAVKADL 424          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_MOUSE (Eukaryotic translation initiation factor 2 subunit 3, X-linked OS=Mus musculus GN=Eif2s3x PE=1 SV=2)

HSP 1 Score: 333.954 bits (855), Expect = 4.717e-91
Identity = 162/229 (70.74%), Postives = 196/229 (85.59%), Query Frame = 1
Query:    1 QENVAINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVKNDL 687
            +E+ A  Q+E I+ F+QGTVA+GAP++PISAQLKYNI+VVCEYIVKKIP+P R+F   P +IVIRSFDVNKPG EVDD++GGVAGGSIL+GVLKV Q IEVRPGIV KD  G + C PI+S+IVSLFAE N+LQ+A PGGLIGVGT +DPTL RADR+VGQVLG VG+LPE+F ELE+++FLLRRLLGVRT+G ++  KV KL+K E+LM+NIGS+STG RV AVK DL
Sbjct:  196 KESQAKEQYEQILAFVQGTVAEGAPIIPISAQLKYNIEVVCEYIVKKIPVPPRDFTSEPRLIVIRSFDVNKPGCEVDDLKGGVAGGSILKGVLKVGQEIEVRPGIVSKDSEGKLMCKPIFSKIVSLFAEHNDLQYAAPGGLIGVGTKIDPTLCRADRMVGQVLGAVGALPEIFTELEISYFLLRRLLGVRTEGDKKAAKVQKLSKNEVLMVNIGSLSTGGRVSAVKADL 424          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_HUMAN (Eukaryotic translation initiation factor 2 subunit 3 OS=Homo sapiens GN=EIF2S3 PE=1 SV=3)

HSP 1 Score: 333.954 bits (855), Expect = 4.717e-91
Identity = 162/229 (70.74%), Postives = 196/229 (85.59%), Query Frame = 1
Query:    1 QENVAINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVKNDL 687
            +E+ A  Q+E I+ F+QGTVA+GAP++PISAQLKYNI+VVCEYIVKKIP+P R+F   P +IVIRSFDVNKPG EVDD++GGVAGGSIL+GVLKV Q IEVRPGIV KD  G + C PI+S+IVSLFAE N+LQ+A PGGLIGVGT +DPTL RADR+VGQVLG VG+LPE+F ELE+++FLLRRLLGVRT+G ++  KV KL+K E+LM+NIGS+STG RV AVK DL
Sbjct:  196 KESQAKEQYEQILAFVQGTVAEGAPIIPISAQLKYNIEVVCEYIVKKIPVPPRDFTSEPRLIVIRSFDVNKPGCEVDDLKGGVAGGSILKGVLKVGQEIEVRPGIVSKDSEGKLMCKPIFSKIVSLFAEHNDLQYAAPGGLIGVGTKIDPTLCRADRMVGQVLGAVGALPEIFTELEISYFLLRRLLGVRTEGDKKAAKVQKLSKNEVLMVNIGSLSTGGRVSAVKADL 424          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_BOVIN (Eukaryotic translation initiation factor 2 subunit 3 OS=Bos taurus GN=EIF2S3 PE=2 SV=1)

HSP 1 Score: 333.954 bits (855), Expect = 4.717e-91
Identity = 162/229 (70.74%), Postives = 196/229 (85.59%), Query Frame = 1
Query:    1 QENVAINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVKNDL 687
            +E+ A  Q+E I+ F+QGTVA+GAP++PISAQLKYNI+VVCEYIVKKIP+P R+F   P +IVIRSFDVNKPG EVDD++GGVAGGSIL+GVLKV Q IEVRPGIV KD  G + C PI+S+IVSLFAE N+LQ+A PGGLIGVGT +DPTL RADR+VGQVLG VG+LPE+F ELE+++FLLRRLLGVRT+G ++  KV KL+K E+LM+NIGS+STG RV AVK DL
Sbjct:  196 KESQAKEQYEQILAFVQGTVAEGAPIIPISAQLKYNIEVVCEYIVKKIPVPPRDFTSEPRLIVIRSFDVNKPGCEVDDLKGGVAGGSILKGVLKVGQEIEVRPGIVSKDSEGKLMCKPIFSKIVSLFAEHNDLQYAAPGGLIGVGTKIDPTLCRADRMVGQVLGAVGALPEIFTELEISYFLLRRLLGVRTEGDKKAAKVQKLSKNEVLMVNIGSLSTGGRVSAVKADL 424          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_DROME (Eukaryotic translation initiation factor 2 subunit 3 OS=Drosophila melanogaster GN=Su(var)3-9 PE=2 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.051e-90
Identity = 163/230 (70.87%), Postives = 194/230 (84.35%), Query Frame = 1
Query:    1 QENVAINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVKNDLA 690
            +E+ A  Q+E I KF+QGTVA+GAP++PISAQLKYNIDV+CEYIV KIP+P R+F  PP +IVIRSFDVNKPG EV D++GGVAGGSIL GVLKV Q IEVRPG+V KD  GNI C PI+SRIVSLFAEQNELQ+AVPGGLIGVGT +DPTL RADRLVGQVLG VG LP+++ ELE++++LLRRLLGVRT G ++  +V KL K EIL++NIGS+STG R+ A K DLA
Sbjct:  195 KESQAKEQYEEITKFVQGTVAEGAPIIPISAQLKYNIDVLCEYIVNKIPVPPRDFNAPPRLIVIRSFDVNKPGCEVADLKGGVAGGSILSGVLKVGQEIEVRPGVVTKDSDGNITCRPIFSRIVSLFAEQNELQYAVPGGLIGVGTKIDPTLCRADRLVGQVLGAVGQLPDIYQELEISYYLLRRLLGVRTDGDKKGARVEKLQKNEILLVNIGSLSTGGRISATKGDLA 424          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2H_MOUSE (Eukaryotic translation initiation factor 2 subunit 3, Y-linked OS=Mus musculus GN=Eif2s3y PE=2 SV=2)

HSP 1 Score: 332.413 bits (851), Expect = 1.373e-90
Identity = 162/229 (70.74%), Postives = 196/229 (85.59%), Query Frame = 1
Query:    1 QENVAINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVKNDL 687
            +E+ A  Q+E I+ F+QGTVA+GAP++PISAQLKYNI+VVCEYIVKKIP+P R+F   P +IVIRSFDVNKPG EVDD++GGVAGGSIL+GVLKV Q IEVRPGIV KD  G + C PI+S+IVSLFAE N+LQ+A PGGLIGVGT +DPTL RADR+VGQVLG VG+LPE+F ELE+++FLLRRLLGVRT+G ++  KV KL+K E+LM+NIGS+STG RV AVK DL
Sbjct:  196 KESQAKEQYEQILAFVQGTVAEGAPIIPISAQLKYNIEVVCEYIVKKIPVPLRDFTSEPRLIVIRSFDVNKPGCEVDDLKGGVAGGSILKGVLKVGQEIEVRPGIVSKDGEGKLMCKPIFSKIVSLFAEHNDLQYAAPGGLIGVGTKIDPTLCRADRMVGQVLGAVGALPEIFTELEISYFLLRRLLGVRTEGDKKAAKVQKLSKNEVLMVNIGSLSTGGRVSAVKADL 424          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_PONAB (Eukaryotic translation initiation factor 2 subunit 3 OS=Pongo abelii GN=EIF2S3 PE=2 SV=1)

HSP 1 Score: 332.028 bits (850), Expect = 1.793e-90
Identity = 161/229 (70.31%), Postives = 195/229 (85.15%), Query Frame = 1
Query:    1 QENVAINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVKNDL 687
            +E+ A  Q+E I+ F+QGTVA+GAP++PISAQLKYNI+VVCEYIVKKIP+P R+F   P +IVIRSFDVNKPG EVDD++GGVAGGSIL+GVLKV Q IEVRPGIV KD  G + C PI+S+IVSLFAE N+LQ+A PGGLIGVGT +DPTL RADR+VGQVLG VG+LPE+F ELE+++FLLRRLLGVRT+G ++  KV KL+K E+LM+NIG +STG RV AVK DL
Sbjct:  196 KESQAKEQYEQILAFVQGTVAEGAPIIPISAQLKYNIEVVCEYIVKKIPVPPRDFTSEPRLIVIRSFDVNKPGCEVDDLKGGVAGGSILKGVLKVGQEIEVRPGIVSKDSEGKLMCKPIFSKIVSLFAEHNDLQYAAPGGLIGVGTKIDPTLCRADRMVGQVLGAVGALPEIFTELEISYFLLRRLLGVRTEGDKKAAKVQKLSKNEVLMVNIGPLSTGGRVSAVKADL 424          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_CHICK (Eukaryotic translation initiation factor 2 subunit 3 OS=Gallus gallus GN=EIF2S3 PE=1 SV=1)

HSP 1 Score: 331.257 bits (848), Expect = 3.058e-90
Identity = 161/229 (70.31%), Postives = 196/229 (85.59%), Query Frame = 1
Query:    1 QENVAINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVKNDL 687
            +E+ A  Q+E I+ F+QGTVA+GAP++PISAQLKY+I+VVCEYIVKKIP+P R+F   P +IVIRSFDVNKPG EVDD++GGVAGGSIL+GVLKV Q IEVRPGIV KD  G + C PI+S+IVSLFAE N+LQ+A PGGLIGVGT +DPTL RADR+VGQVLG VG+LPE+F ELE+++FLLRRLLGVRT+G ++  KV KL+K E+LM+NIGS+STG RV AVK DL
Sbjct:  196 KESQAKEQYEQILAFVQGTVAEGAPIIPISAQLKYSIEVVCEYIVKKIPVPLRDFTSEPRLIVIRSFDVNKPGCEVDDLKGGVAGGSILKGVLKVGQEIEVRPGIVSKDSEGKLMCKPIFSKIVSLFAEHNDLQYAAPGGLIGVGTKIDPTLCRADRMVGQVLGAVGALPEIFTELEISYFLLRRLLGVRTEGDKKAAKVQKLSKNEVLMVNIGSLSTGGRVSAVKADL 424          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2G_DICDI (Eukaryotic translation initiation factor 2 subunit 3 OS=Dictyostelium discoideum GN=eif2s3 PE=2 SV=1)

HSP 1 Score: 328.946 bits (842), Expect = 1.517e-89
Identity = 162/230 (70.43%), Postives = 196/230 (85.22%), Query Frame = 1
Query:    1 QENVAINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVKNDLA 690
            +E  A  Q+  I+KFIQGT+A+ AP++PISAQ+KYNIDV+CEYIVKKIPIP R+F   P MIVIRSFDVNKPG  VD+I+GGVAGGSIL+GVLK+   IEVRPG++ K+  G IKC+PI+ RI+SLFAE+NELQ+AVPGGLIGVGT +DPTL RADRLVGQVLG VG LPE+FV LEVNFFLLRRLLGV++ G ++Q KV KL+K++ LM+NIGS STG RV+AVK+DLA
Sbjct:  190 KEAAAQEQYGQILKFIQGTIAENAPIIPISAQMKYNIDVICEYIVKKIPIPVRDFTSDPRMIVIRSFDVNKPGSRVDEIKGGVAGGSILKGVLKIGDEIEVRPGVISKELDGKIKCSPIFCRIISLFAEENELQYAVPGGLIGVGTKIDPTLCRADRLVGQVLGSVGKLPEIFVALEVNFFLLRRLLGVKSDG-DKQSKVKKLSKEDTLMVNIGSTSTGCRVVAVKHDLA 418          
BLAST of FC929869 vs. ExPASy Swiss-Prot
Match: IF2GL_HUMAN (Eukaryotic translation initiation factor 2 subunit 3-like protein OS=Homo sapiens PE=1 SV=2)

HSP 1 Score: 328.176 bits (840), Expect = 2.588e-89
Identity = 159/229 (69.43%), Postives = 193/229 (84.28%), Query Frame = 1
Query:    1 QENVAINQHEAIMKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFIDPPNMIVIRSFDVNKPGFEVDDIRGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLFAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKQEILMLNIGSMSTGARVLAVKNDL 687
            +E  A  Q+E I+ F+QGTVA+GAP++PISAQLKYNI+VVCEYIVKKIP+P R+F   P +IVIRSFDVNKPG EVDD++GGVAGGSIL+GVLKV Q  EVRPGIV KD  G + C  I+S+IVSLFAE N+LQ+A PGGLIGVGT +DPTL RADR+VGQ+LG VG+LPE+F ELE+++FLLRRLLGVRT+G ++  KV KL+K E+LM+NIGS+STG RV AVK DL
Sbjct:  196 KERQAKEQYEQILAFVQGTVAEGAPIIPISAQLKYNIEVVCEYIVKKIPVPPRDFTSEPRLIVIRSFDVNKPGCEVDDLKGGVAGGSILKGVLKVGQETEVRPGIVSKDSEGKLMCKSIFSKIVSLFAEHNDLQYAAPGGLIGVGTKIDPTLCRADRMVGQILGAVGALPEIFTELEISYFLLRRLLGVRTEGDKKAAKVQKLSKNEVLMVNIGSLSTGGRVSAVKADL 424          
The following BLAST results are available for this feature:
BLAST of FC929869 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
IF2G_RAT4.717e-9170.74Eukaryotic translation initiation factor 2 subunit... [more]
IF2G_MOUSE4.717e-9170.74Eukaryotic translation initiation factor 2 subunit... [more]
IF2G_HUMAN4.717e-9170.74Eukaryotic translation initiation factor 2 subunit... [more]
IF2G_BOVIN4.717e-9170.74Eukaryotic translation initiation factor 2 subunit... [more]
IF2G_DROME1.051e-9070.87Eukaryotic translation initiation factor 2 subunit... [more]
IF2H_MOUSE1.373e-9070.74Eukaryotic translation initiation factor 2 subunit... [more]
IF2G_PONAB1.793e-9070.31Eukaryotic translation initiation factor 2 subunit... [more]
IF2G_CHICK3.058e-9070.31Eukaryotic translation initiation factor 2 subunit... [more]
IF2G_DICDI1.517e-8970.43Eukaryotic translation initiation factor 2 subunit... [more]
IF2GL_HUMAN2.588e-8969.43Eukaryotic translation initiation factor 2 subunit... [more]

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Properties
Property NameValue
Genbank descriptionC34001C11EF PostHarvC1 Citrus clementina cDNA clone C34001C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929869 ID=FC929869; Name=FC929869; organism=Citrus clementina; type=EST; length=692bp
CAGGAAAATGTGGCCATCAACCAACATGAAGCTATCATGAAGTTTATCCA
GGGAACTGTTGCTGATGGCGCACCAGTGGTTCCCATTTCTGCACAGCTAA
AGTACAATATTGATGTTGTATGCGAATATATTGTGAAAAAGATTCCCATT
CCAGAGAGGAACTTTATTGATCCACCAAATATGATTGTAATTCGATCTTT
TGATGTCAATAAACCTGGTTTTGAGGTTGATGATATAAGAGGTGGTGTTG
CTGGTGGCAGCATCCTGAGGGGTGTTCTGAAGGTGAACCAATTTATTGAG
GTTCGTCCCGGTATTGTTGTCAAAGATGAGTCCGGGAACATCAAGTGCAC
ACCTATATACTCGAGAATAGTTTCATTGTTTGCTGAGCAAAATGAGTTAC
AATTTGCAGTTCCAGGAGGTCTCATTGGGGTTGGTACAACCATGGATCCT
ACTTTGACACGGGCGGATAGACTGGTGGGTCAGGTTCTTGGGGAGGTTGG
GTCACTCCCTGAAGTTTTTGTCGAGCTTGAGGTGAACTTCTTTCTATTGC
GCCGGCTTTTGGGTGTGAGGACAAAGGGCTCAGAAAGGCAGGGAAAGGTC
TCCAAACTTGCCAAACAAGAGATTCTTATGCTGAACATAGGATCTATGTC
GACCGGAGCTAGAGTTCTTGCTGTAAAGAATGATTTGGCAAA
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