FC929948
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC929948 vs. ExPASy Swiss-Prot
Match: HS235_ARATH (23.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.5 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.950e-35 Identity = 92/182 (50.55%), Postives = 109/182 (59.89%), Query Frame = 3 Query: 132 IPRALRCTVAPSATSASRFFNTNAVHQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSLSQVLNFMDQMTENPFFSGTRG----GLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXXS--VRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVP 659 +PRALR V P A S SR FNTNA Y TRSLSQ+LNFMDQ++E P S TRG G+RRGW+ KE DDAL+L IDMPGL +EDV+++LEQNTLVIR S RR+TSRI+LPEK+Y+TD+IKAEMKNGVLKV +P Sbjct: 20 VPRALRA-VRPVAAS-SRLFNTNAARNYEDGVDRNHHSNRHVSRHGGDFFSHILDPFTP-----TRSLSQMLNFMDQVSEIPLVSATRGMGASGVRRGWNVKEKDDALHLRIDMPGLSREDVKLALEQNTLVIRGEGETEEGEDVSGDGRRFTSRIELPEKVYKTDEIKAEMKNGVLKVVIP 194
BLAST of FC929948 vs. ExPASy Swiss-Prot
Match: HS22M_PEA (Heat shock 22 kDa protein, mitochondrial OS=Pisum sativum GN=HSP22 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.545e-32 Identity = 84/168 (50.00%), Postives = 99/168 (58.93%), Query Frame = 3 Query: 162 PSATSASRFFNTNAVHQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSLSQVLNFMDQMTENPFFSGTRGGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIR--XXXXXXXXXXXSVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVP 659 P A+SASR FNTNA+ QY RSLSQVLN +D +T+NP S RRGWDA+ET+DAL L +DMPGLGKEDV++S+EQNTL I+ S RR++SRIDLPEKLY+ D IKAEMKNGVLKVTVP Sbjct: 23 PVASSASRSFNTNAMRQYDQHSDDRNVDVYRHSFPRTRRDDLLLSDVFDPFSPP-RSLSQVLNMVDLLTDNPVLSAAS---RRGWDARETEDALFLRLDMPGLGKEDVKISVEQNTLTIKGEEGAKESEEKEKSGRRFSSRIDLPEKLYKIDVIKAEMKNGVLKVTVP 186
BLAST of FC929948 vs. ExPASy Swiss-Prot
Match: HS23M_ARATH (23.6 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.6 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.495e-32 Identity = 86/190 (45.26%), Postives = 103/190 (54.21%), Query Frame = 3 Query: 132 IPRALRCTVAPSATS------ASRFFNTNAVHQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSLSQVLNFMDQMTENPFFSGTRG----GLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIR----XXXXXXXXXXXSVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVP 659 + R L ++AP + S +SR FNTNAV Y TRS+SQVLN MDQ ENP S TRG G RRGWD KE DDAL L IDMPGL +EDV+++LEQ+TLVIR RR+TSRI LP+K+Y+ D+IKAEMKNGVLKV +P Sbjct: 7 LKRLLSSSIAPRSRSVLRPAVSSRLFNTNAVRSYDDDGENGDGVDLYRRSVPRRRGDFFSDVFDPFSP--TRSVSQVLNLMDQFMENPLLSATRGMGASGARRGWDIKEKDDALYLRIDMPGLSREDVKLALEQDTLVIRGEGKNEEDGGEEGESGNRRFTSRIGLPDKIYKIDEIKAEMKNGVLKVVIP 194
BLAST of FC929948 vs. ExPASy Swiss-Prot
Match: HS22M_SOYBN (Heat shock 22 kDa protein, mitochondrial OS=Glycine max GN=HSP23.9 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 4.066e-30 Identity = 56/84 (66.67%), Postives = 68/84 (80.95%), Query Frame = 3 Query: 408 RGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXXSVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVP 659 RGWDA+ET+DAL+L +DMPGL KEDV++S+EQNTL+I+ S RRYTSRIDLP+KLY+ DQI+AEMKNGVLKV VP Sbjct: 112 RGWDARETEDALHLRVDMPGLAKEDVKISVEQNTLIIKGEGAKEGDEEESARRYTSRIDLPDKLYKIDQIRAEMKNGVLKVVVP 195 HSP 2 Score: 27.335 bits (59), Expect = 4.066e-30 Identity = 13/25 (52.00%), Postives = 16/25 (64.00%), Query Frame = 2 Query: 302 CV*SIFTNKEPEPGPELHGSDDGES 376 CV SIF++ E EPG E G G+S Sbjct: 72 CVGSIFSDSEFEPGSEHDGPGHGQS 96 HSP 3 Score: 25.7942 bits (55), Expect = 4.066e-30 Identity = 10/23 (43.48%), Postives = 17/23 (73.91%), Query Frame = 3 Query: 147 RCTVAPSATSASRFFNTNAVHQY 215 R + P+A+++ R F+TNA+ QY Sbjct: 18 RSLLRPAASASHRSFDTNAMRQY 40
BLAST of FC929948 vs. ExPASy Swiss-Prot
Match: HS23C_CHERU (Small heat shock protein, chloroplastic OS=Chenopodium rubrum GN=HSP23 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.176e-30 Identity = 64/115 (55.65%), Postives = 82/115 (71.30%), Query Frame = 3 Query: 324 TRSLSQVLNFMDQMTENPFFSGTRGG---LRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXXSVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVP 659 TRS+ Q++N MDQ+ ENPF + +RG +RRGWD +E ++AL L +DMPGL KEDV+VS+E NTL+I+ RRY+SRI+L LY+ D IKAEMKNGVLKVTVP Sbjct: 74 TRSVGQLMNLMDQLMENPFMAASRGSGRAMRRGWDVREDEEALELKVDMPGLAKEDVKVSVEDNTLIIKSEAEKETEEEEQRRRYSSRIELTPNLYKIDGIKAEMKNGVLKVTVP 188
BLAST of FC929948 vs. ExPASy Swiss-Prot
Match: HS24M_ORYSJ (24.1 kDa heat shock protein, mitochondrial OS=Oryza sativa subsp. japonica GN=HSP24.1 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.570e-21 Identity = 56/113 (49.56%), Postives = 74/113 (65.49%), Query Frame = 3 Query: 327 RSLSQVLNFMDQMTENPFFSGTRGGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXXSV--RRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVP 659 +SL ++L+ MD + P LRRGW+AKE+++AL+L +DMPGLGKE V+V EQN+LVI+ RY+ RI+L ++YR DQIKAEMKNGVLKV VP Sbjct: 93 QSLGRLLSLMDDLA-TPAGRAGAATLRRGWNAKESEEALHLRVDMPGLGKEHVKVWAEQNSLVIKGEGEKEAGEDEGAAPARYSGRIELAPEVYRMDQIKAEMKNGVLKVVVP 204
BLAST of FC929948 vs. ExPASy Swiss-Prot
Match: HS26M_ORYSJ (26.2 kDa heat shock protein, mitochondrial OS=Oryza sativa subsp. japonica GN=HSP26.2 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.552e-16 Identity = 55/119 (46.22%), Postives = 68/119 (57.14%), Query Frame = 3 Query: 330 SLSQVLNFM-DQMTENPFFSGTRG----GLRRG--WDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXXSVR--RYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVP 659 SL ++L M D GT G RRG W AKE DDA++L + MPGLGKE V+V EQN+LVI+ RYT RI+LP ++ D+IKAEMKNGVL+V VP Sbjct: 114 SLGRLLALMEDAAVATAAAPGTNGLATAAARRGGWWVAKEDDDAVHLKVSMPGLGKEHVKVWAEQNSLVIKGEGEKDPEDDADAAPPRYTRRIELPADAFKMDKIKAEMKNGVLRVAVP 232
BLAST of FC929948 vs. ExPASy Swiss-Prot
Match: HS25P_ARATH (25.3 kDa heat shock protein, chloroplastic OS=Arabidopsis thaliana GN=HSP25.3 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.241e-15 Identity = 49/122 (40.16%), Postives = 71/122 (58.20%), Query Frame = 3 Query: 327 RSLSQVLNFMDQMTEN--PFFSGTRGG-----LRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVI----RXXXXXXXXXXXSVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVP 659 R++ Q+L+ MD+M E+ P RGG +R WD KE + + + DMPGL KEDV++S+E N LVI + SV Y +R+ LP+ + D+IKAE+KNGVL +T+P Sbjct: 93 RTMRQMLDTMDRMFEDTMPVSGRNRGGSGVSEIRAPWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGEQKKEDSDDSWSGRSVSSYGTRLQLPDNCEK-DKIKAELKNGVLFITIP 213
BLAST of FC929948 vs. ExPASy Swiss-Prot
Match: HS22C_SOYBN (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max GN=HSP22 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.578e-13 Identity = 47/122 (38.52%), Postives = 71/122 (58.20%), Query Frame = 3 Query: 327 RSLSQVLNFMDQMTENPF-FSGTR---GGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVI----RXXXXXXXXXXXSVRRYTS---RIDLPEKLYRTDQIKAEMKNGVLKVTVP 659 RS+ Q+L+ MD++ E+ F G G +R WD K+ + + + DMPGL KEDV+VS+E + LVI + S R Y+S R+ LP+ + D++KAE+KNGVL +T+P Sbjct: 47 RSMRQILDTMDRVFEDTMTFPGRNIGGGEIRAPWDIKDEEHEIRMRFDMPGLAKEDVKVSVEDDMLVIKGGHKSEQEHGGDDSWSSRTYSSYDTRLKLPDNCEK-DKVKAELKNGVLYITIP 167
BLAST of FC929948 vs. ExPASy Swiss-Prot
Match: HS22C_PETHY (Small heat shock protein, chloroplastic OS=Petunia hybrida GN=HSP22 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.971e-13 Identity = 41/121 (33.88%), Postives = 73/121 (60.33%), Query Frame = 3 Query: 327 RSLSQVLNFMDQMTENPF-FSGTR----GGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVI-----RXXXXXXXXXXXSVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVP 659 R++ Q+++ MD++ E+ F G+R G +R WD K+ ++ + + DMPGL KE+V+VS+E + LVI + + Y +R+ LP+ + + D++KAE+KNGVL +++P Sbjct: 108 RTMRQMMDTMDRLFEDTMTFPGSRNRGTGEIRAPWDIKDDENEIKMRFDMPGLSKEEVKVSVEDDVLVIKGEHKKEESGKDDSWGRNYSSYDTRLSLPDNVDK-DKVKAELKNGVLLISIP 227 The following BLAST results are available for this feature:
BLAST of FC929948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929948 ID=FC929948; Name=FC929948; organism=Citrus clementina; type=EST; length=659bpback to top |