FC930033

Overview
NameFC930033
Unique NameFC930033
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930033 vs. ExPASy Swiss-Prot
Match: CDPKD_ARATH (Calcium-dependent protein kinase 13 OS=Arabidopsis thaliana GN=CPK13 PE=1 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 3.831e-32
Identity = 65/78 (83.33%), Postives = 69/78 (88.46%), Query Frame = 1
Query:  460 VDTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGYIGPNELRDALMEDGADDCTDVANDIFQEVDTDKD 693
            VDT GKGTLDYGEF+AV LHL+++ANDEHL KAFSYFDKDGNGYI P EL DAL EDG DDC DVANDIFQEVDTDKD
Sbjct:  403 VDTKGKGTLDYGEFVAVSLHLQKVANDEHLRKAFSYFDKDGNGYILPQELCDALKEDGGDDCVDVANDIFQEVDTDKD 480          
BLAST of FC930033 vs. ExPASy Swiss-Prot
Match: CDPKU_ARATH (Calcium-dependent protein kinase 30 OS=Arabidopsis thaliana GN=CPK30 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.788e-20
Identity = 44/77 (57.14%), Postives = 57/77 (74.03%), Query Frame = 1
Query:  463 DTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGYIGPNELRDALMEDGADDCTDVANDIFQEVDTDKD 693
            D NG G LDYGEF+AV++HL++M NDEH  +AF +FDKDG+GYI   ELR+AL ++  +    V  DI +EVDTDKD
Sbjct:  409 DVNGNGCLDYGEFVAVIIHLQKMENDEHFRQAFMFFDKDGSGYIESEELREALTDELGEPDNSVIIDIMREVDTDKD 485          
BLAST of FC930033 vs. ExPASy Swiss-Prot
Match: CDPK8_ARATH (Calcium-dependent protein kinase 8 OS=Arabidopsis thaliana GN=CPK8 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.112e-18
Identity = 43/77 (55.84%), Postives = 59/77 (76.62%), Query Frame = 1
Query:  463 DTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGYIGPNELRDALMEDGADDCTDVANDIFQEVDTDKD 693
            D +G GTL+YGEF+AV +HL++MANDEHLHKAFS+FD++ + YI   ELR+AL ++   +  +V   I Q+VDTDKD
Sbjct:  408 DVDGDGTLNYGEFVAVSVHLKKMANDEHLHKAFSFFDQNQSDYIEIEELREALNDEVDTNSEEVVAAIMQDVDTDKD 484          
BLAST of FC930033 vs. ExPASy Swiss-Prot
Match: CDPK7_ARATH (Calcium-dependent protein kinase 7 OS=Arabidopsis thaliana GN=CPK7 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.013e-16
Identity = 44/79 (55.70%), Postives = 61/79 (77.22%), Query Frame = 1
Query:  463 DTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGYIGPNELRDALMEDGADDCT--DVANDIFQEVDTDKD 693
            D +G GTL+Y EF+AV +HL++MANDEHLHKAF++FD++ +GYI  +ELR+AL  D  D+ +  +V   I Q+VDTDKD
Sbjct:  409 DVDGDGTLNYSEFVAVSVHLKKMANDEHLHKAFNFFDQNQSGYIEIDELREAL-NDELDNTSSEEVIAAIMQDVDTDKD 486          
BLAST of FC930033 vs. ExPASy Swiss-Prot
Match: CDPKA_ARATH (Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana GN=CPK10 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.947e-16
Identity = 40/77 (51.95%), Postives = 56/77 (72.73%), Query Frame = 1
Query:  463 DTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGYIGPNELRDALMEDGADDCTDVANDIFQEVDTDKD 693
            D +G G LDYGEF+AV++HL+++ NDE    AF +FDKDG+ YI  +ELR+AL ++  +    V +DI +EVDTDKD
Sbjct:  413 DVDGNGFLDYGEFVAVIIHLQKIENDELFKLAFMFFDKDGSTYIELDELREALADELGEPDASVLSDIMREVDTDKD 489          
BLAST of FC930033 vs. ExPASy Swiss-Prot
Match: CDPKY_ARATH (Calcium-dependent protein kinase 34 OS=Arabidopsis thaliana GN=CPK34 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.910e-15
Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 1
Query:  463 DTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGYIGPNELRDALMEDGADDCTDVANDIFQEVDTDKD 693
            D +G GT+DYGEF+A  +H+ R+  +EHL+ AF +FDKD +GYI   EL  AL E G +D  D+  +I  EVD D D
Sbjct:  418 DADGNGTIDYGEFIAATMHINRLDREEHLYSAFQHFDKDNSGYITTEELEQALREFGMNDGRDI-KEIISEVDGDND 493          
BLAST of FC930033 vs. ExPASy Swiss-Prot
Match: CDPKH_ARATH (Calcium-dependent protein kinase 17 OS=Arabidopsis thaliana GN=CPK17 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.495e-15
Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 1
Query:  463 DTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGYIGPNELRDALMEDGADDCTDVANDIFQEVDTDKD 693
            D +G GT+DYGEF+A  +H+ R+  +EHL+ AF +FDKD +GYI   EL  AL E G +D  D+  +I  EVD D D
Sbjct:  423 DADGNGTIDYGEFIAATMHINRLDREEHLYSAFQHFDKDNSGYITMEELEQALREFGMNDGRDI-KEIISEVDGDND 498          
BLAST of FC930033 vs. ExPASy Swiss-Prot
Match: CDPKW_ARATH (Calcium-dependent protein kinase 32 OS=Arabidopsis thaliana GN=CPK32 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.705e-14
Identity = 39/77 (50.65%), Postives = 53/77 (68.83%), Query Frame = 1
Query:  463 DTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGYIGPNELRDALMEDGADDCTDVANDIFQEVDTDKD 693
            D +  G LD  EF+A+ +HLR+M NDEHL KAF++FD++ NGYI   ELR+AL  D      +V + I ++VDTDKD
Sbjct:  413 DIDRDGYLDCDEFIAISVHLRKMGNDEHLKKAFAFFDQNNNGYIEIEELREAL-SDELGTSEEVVDAIIRDVDTDKD 488          
BLAST of FC930033 vs. ExPASy Swiss-Prot
Match: CDPKQ_ARATH (Calcium-dependent protein kinase 26 OS=Arabidopsis thaliana GN=CPK26 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.705e-14
Identity = 37/77 (48.05%), Postives = 49/77 (63.64%), Query Frame = 1
Query:  463 DTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGYIGPNELRDALMEDGADDCTDVANDIFQEVDTDKD 693
            D +  GT+DYGEF+A  +HL ++  +EHL  AF YFDKDG+GYI  +EL+ A  E G  D      D+ +EVD D D
Sbjct:  374 DIDKSGTIDYGEFIAATIHLNKLEREEHLLSAFRYFDKDGSGYITIDELQHACAEQGMSDV--FLEDVIKEVDQDND 448          
BLAST of FC930033 vs. ExPASy Swiss-Prot
Match: CDPKE_ARATH (Calcium-dependent protein kinase 14 OS=Arabidopsis thaliana GN=CPK14 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.705e-14
Identity = 37/77 (48.05%), Postives = 52/77 (67.53%), Query Frame = 1
Query:  463 DTNGKGTLDYGEFLAVLLHLRRMANDEHLHKAFSYFDKDGNGYIGPNELRDALMEDGADDCTDVANDIFQEVDTDKD 693
            D +  G LD  EF+A+ +H+R++ NDEHL KAF++FDK+ +GYI   ELRDAL +D      +V   I  +VDT+KD
Sbjct:  404 DVDKDGYLDVNEFVAISVHIRKLGNDEHLKKAFTFFDKNKSGYIEIEELRDALADDVDTTSEEVVEAIILDVDTNKD 480          
The following BLAST results are available for this feature:
BLAST of FC930033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
CDPKD_ARATH3.831e-3283.33Calcium-dependent protein kinase 13 OS=Arabidopsis... [more]
CDPKU_ARATH9.788e-2057.14Calcium-dependent protein kinase 30 OS=Arabidopsis... [more]
CDPK8_ARATH4.112e-1855.84Calcium-dependent protein kinase 8 OS=Arabidopsis ... [more]
CDPK7_ARATH1.013e-1655.70Calcium-dependent protein kinase 7 OS=Arabidopsis ... [more]
CDPKA_ARATH2.947e-1651.95Calcium-dependent protein kinase 10 OS=Arabidopsis... [more]
CDPKY_ARATH1.910e-1549.35Calcium-dependent protein kinase 34 OS=Arabidopsis... [more]
CDPKH_ARATH2.495e-1549.35Calcium-dependent protein kinase 17 OS=Arabidopsis... [more]
CDPKW_ARATH4.705e-1450.65Calcium-dependent protein kinase 32 OS=Arabidopsis... [more]
CDPKQ_ARATH4.705e-1448.05Calcium-dependent protein kinase 26 OS=Arabidopsis... [more]
CDPKE_ARATH4.705e-1448.05Calcium-dependent protein kinase 14 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionC34003A11EF PostHarvC1 Citrus clementina cDNA clone C34003A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930033 ID=FC930033; Name=FC930033; organism=Citrus clementina; type=EST; length=695bp
GGAGGTTGAGGATACATTTTTGTTGGTGATTTGCCTATTGCTACGTCTTT
TATGTAGGATGTGTATTTAATGAAAAATGACCAAAATGTCTTGGAAATCA
TTCTCTGTTGCTGATTCTATACACATTCTTAGGATGCTATTGATTCTATT
CTTAACGATCTTACAATGATGGATCAGATATATCTGGAATTTGAAAAGAG
ATGATGCATTGTTGGTCAAACATGTGTGTTCTTTATAAACATTACTGTTT
TATTCGGGGGTAAAAAAATTACGTTATGGAAGAGTATAATGATGTAAGAA
TAATATACGCATGATCATTACCCTCTATTCTGTATACAACTGCAGATTAT
TTGTTGCTGGTGTTTGCTTATGCTTCTTCAGTCTTCCTCTGTCCTTGCAG
CGTAGGTTAATTTTGAAAACTTCAACTTTCTGTTTTGAATGGGATGTGTT
TGTTGACAGGTAGATACTAACGGGAAAGGAACATTGGACTATGGGGAATT
TCTTGCCGTCTTGCTCCATCTACGAAGAATGGCCAATGATGAGCATCTCC
ACAAGGCTTTCTCCTACTTTGACAAGGATGGAAATGGTTATATTGGGCCA
AATGAGCTCCGTGATGCATTGATGGAAGATGGAGCAGATGACTGTACTGA
TGTAGCAAATGACATCTTCCAAGAAGTTGACACAGACAAGGATGG
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