FC930101

Overview
NameFC930101
Unique NameFC930101
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14052 contig Ccv1_Contig14052:33..774. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930101 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 262.692 bits (670), Expect = 2.990e-76
Identity = 126/170 (74.12%), Postives = 146/170 (85.88%), Query Frame = 3
Query:  126 MSCFGCCEEDDMHKAADNGNAYMVKSSAGTDGAYHASEAAPKGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSW 635
            MSCF CC++DDMH+A DNG  +M  +SAG +G   A+E+A +  Q V +QPI VP+I+VDELK+IT+NFG+ ALIGEGSYGRVY+G+LKSG AAAIKKLD+SKQPD EFLAQVSMVSRLK EN V+LLGYCVDG  RVLAYE+A NGSLHDILHGRKGVKGAQPGPVLSW
Sbjct:    1 MSCFSCCDDDDMHRATDNG-PFMAHNSAGNNGGQRATESAQRETQTVNIQPIAVPSIAVDELKDITDNFGSKALIGEGSYGRVYHGVLKSGRAAAIKKLDSSKQPDREFLAQVSMVSRLKDENVVELLGYCVDGGFRVLAYEYAPNGSLHDILHGRKGVKGAQPGPVLSW 169          

HSP 2 Score: 44.2838 bits (103), Expect = 2.990e-76
Identity = 20/22 (90.91%), Postives = 21/22 (95.45%), Query Frame = 2
Query:  647 EIAVGAAKGLEYLHEKADPHII 712
            +IAVGAAKGLEYLHEKA PHII
Sbjct:  174 KIAVGAAKGLEYLHEKAQPHII 195          
BLAST of FC930101 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 7.224e-72
Identity = 124/174 (71.26%), Postives = 141/174 (81.03%), Query Frame = 3
Query:  126 MSCFGCC-EEDDMHKAADNGNAYMVKSS--AGTDGAYH-ASEAAPKGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSW 635
            MSCFGCC E+DDMHK AD G  +        G D  +H ASE A KG   VK+QPIEVP I   ELKE T++FG+N+LIGEGSYGRVYYG+L +   +AIKKLD++KQPD EFLAQVSMVSRLKH+NFVQLLGYCVDG SR+L+YEFA+NGSLHDILHGRKGVKGAQPGPVLSW
Sbjct:    1 MSCFGCCGEDDDMHKTADYGGRHNQAKHFPPGNDARHHQASETAQKGPPVVKLQPIEVPIIPFSELKEATDDFGSNSLIGEGSYGRVYYGVLNNDLPSAIKKLDSNKQPDNEFLAQVSMVSRLKHDNFVQLLGYCVDGNSRILSYEFANNGSLHDILHGRKGVKGAQPGPVLSW 174          

HSP 2 Score: 43.5134 bits (101), Expect = 7.224e-72
Identity = 19/22 (86.36%), Postives = 22/22 (100.00%), Query Frame = 2
Query:  647 EIAVGAAKGLEYLHEKADPHII 712
            +IAVGAA+GLEYLHEKA+PHII
Sbjct:  179 KIAVGAARGLEYLHEKANPHII 200          
BLAST of FC930101 vs. ExPASy Swiss-Prot
Match: Y2197_ARATH (Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 9.401e-47
Identity = 87/174 (50.00%), Postives = 117/174 (67.24%), Query Frame = 3
Query:  141 CCEEDDMHKAADNGNAYMVKSS-------AGTDGAYHASEAAPKGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDAS--KQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSW 635
            CC   D   A    N Y    +        G +     +  AP+     KV PIE+P++++DEL  +  NFG  ALIGEGSYGRV+ G  K G A AIKKLDAS  ++PD +F +Q+S+VSRLKH++FV+LLGYC++  +R+L Y+FA+ GSLHD+LHGRKGV+GA+PGPVL+W
Sbjct:    3 CCGGADEEPAGPPANQYAAPPNKAGNPNFGGGNRGEPRNPNAPRSGAPAKVLPIEIPSVALDELNRMAGNFGNKALIGEGSYGRVFCGKFK-GEAVAIKKLDASSSEEPDSDFTSQLSVVSRLKHDHFVELLGYCLEANNRILIYQFATKGSLHDVLHGRKGVQGAEPGPVLNW 175          

HSP 2 Score: 35.039 bits (79), Expect = 9.401e-47
Identity = 15/22 (68.18%), Postives = 18/22 (81.82%), Query Frame = 2
Query:  647 EIAVGAAKGLEYLHEKADPHII 712
            +IA GAAKGLE+LHEK  P I+
Sbjct:  180 KIAYGAAKGLEFLHEKVQPPIV 201          
BLAST of FC930101 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.078e-23
Identity = 55/124 (44.35%), Postives = 73/124 (58.87%), Query Frame = 3
Query:  249 KGAQAVKVQPIEVPA--ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKL-DASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVK 605
            K A ++ +   E P   ++  +L + T  F  ++LIG G +G VY  ILK G A AIKKL   S Q D EF+A++  + ++KH N V LLGYC  G  R+L YEF   GSL D+LH  K  GVK
Sbjct:  854 KEALSINLAAFEKPLRKLTFADLLQATNGFHNDSLIGSGGFGDVYKAILKDGSAVAIKKLIHVSGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVLHDPKKAGVK 977          

HSP 2 Score: 33.8834 bits (76), Expect = 1.078e-23
Identity = 13/26 (50.00%), Postives = 19/26 (73.08%), Query Frame = 2
Query:  635 ATASEIAVGAAKGLEYLHEKADPHII 712
            +T  +IA+G+A+GL +LH    PHII
Sbjct:  981 STRRKIAIGSARGLAFLHHNCSPHII 1006          
BLAST of FC930101 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 6.916e-23
Identity = 64/173 (36.99%), Postives = 80/173 (46.24%), Query Frame = 3
Query:  126 MSCFGCCEEDDMHKA--ADNGNAYMVKSSAGT---------DGAYHASEAAPKGAQAVKVQP------IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKS-GHAAAIKKLDASK-QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILH 587
            M CF C +  D  K    D  N    K S  T          G    S     G++   + P      I     +  EL   T NF  +  +GEG +GRVY G L S G   A+K+LD +  Q + EFL +V M+S L H N V L+GYC DG  R+L YEF   GSL D LH
Sbjct:    1 MGCFSCFDSSDDEKLNPVDESNHGQKKQSQPTVSNNISGLPSGGEKLSSKTNGGSKRELLLPRDGLGQIAAHTFAFRELAAATMNFHPDTFLGEGGFGRVYKGRLDSTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLH 173          

HSP 2 Score: 36.1946 bits (82), Expect = 6.916e-23
Identity = 15/22 (68.18%), Postives = 20/22 (90.91%), Query Frame = 2
Query:  647 EIAVGAAKGLEYLHEKADPHII 712
            +IA GAAKGLE+LH+KA+P +I
Sbjct:  189 KIAAGAAKGLEFLHDKANPPVI 210          
BLAST of FC930101 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.536e-22
Identity = 56/150 (37.33%), Postives = 80/150 (53.33%), Query Frame = 3
Query:  216 DGAYHASEA-------APKGAQAVKVQPIEVPA--ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKL-DASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSW 635
            DG  H++ A       + + A ++ +   E P   ++  +L E T  F  ++L+G G +G VY   LK G   AIKKL   S Q D EF A++  + ++KH N V LLGYC  G  R+L YE+   GSL D+LH RK +     G  L+W
Sbjct:  841 DGHSHSATANSAWKFTSAREALSINLAAFEKPLRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKI-----GIKLNW 985          

HSP 2 Score: 32.3426 bits (72), Expect = 2.536e-22
Identity = 13/22 (59.09%), Postives = 17/22 (77.27%), Query Frame = 2
Query:  647 EIAVGAAKGLEYLHEKADPHII 712
            +IA+GAA+GL +LH    PHII
Sbjct:  990 KIAIGAARGLAFLHHNCIPHII 1011          
BLAST of FC930101 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.299e-22
Identity = 55/142 (38.73%), Postives = 78/142 (54.93%), Query Frame = 3
Query:  216 DGAYHASEA-------APKGAQAVKVQPIEVPA--ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKL-DASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVK 605
            DG  H++ A       + + A ++ +   E P   ++  +L E T  F  ++L+G G +G VY   LK G   AIKKL   S Q D EF A++  + ++KH N V LLGYC  G  R+L YE+   GSL D+LH RK  G+K
Sbjct:  841 DGHSHSATANSAWKFTSAREALSINLAAFEKPLRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKTGIK 982          

HSP 2 Score: 32.3426 bits (72), Expect = 3.299e-22
Identity = 13/22 (59.09%), Postives = 17/22 (77.27%), Query Frame = 2
Query:  647 EIAVGAAKGLEYLHEKADPHII 712
            +IA+GAA+GL +LH    PHII
Sbjct:  990 KIAIGAARGLAFLHHNCIPHII 1011          
BLAST of FC930101 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.978e-21
Identity = 45/106 (42.45%), Postives = 64/106 (60.38%), Query Frame = 3
Query:  291 AISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLD-ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVK 605
            A + +EL + T NF     +G G YG+VY G L +G   AIK+    S Q   EF  ++ ++SR+ H+N V+LLG+C D   ++L YE+  NGSL D L G+ GVK
Sbjct:  621 AFTFEELSKCTNNFSDANDVGGGGYGQVYKGTLPNGQVIAIKRAQQGSMQGAFEFKTEIELLSRVHHKNVVKLLGFCFDQKEQMLVYEYIPNGSLRDGLSGKNGVK 726          

HSP 2 Score: 33.8834 bits (76), Expect = 5.978e-21
Identity = 15/22 (68.18%), Postives = 18/22 (81.82%), Query Frame = 2
Query:  647 EIAVGAAKGLEYLHEKADPHII 712
            +IA+G+ KGL YLHE ADP II
Sbjct:  734 KIALGSGKGLAYLHELADPPII 755          
BLAST of FC930101 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.747e-21
Identity = 48/128 (37.50%), Postives = 68/128 (53.12%), Query Frame = 3
Query:  261 AVKVQPIEVPA--ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKL-DASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSW 635
            ++ V   E P   ++   L E T  F    ++G G +G VY   L+ G   AIKKL   + Q D EF+A++  + ++KH N V LLGYC  G  R+L YE+   GSL  +LH +   KG   G  L+W
Sbjct:  834 SINVATFEKPLRKLTFAHLLEATNGFSAETMVGSGGFGEVYKAQLRDGSVVAIKKLIRITGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKWGSLETVLHEKSSKKG---GIYLNW 958          

HSP 2 Score: 33.4982 bits (75), Expect = 7.747e-21
Identity = 14/26 (53.85%), Postives = 18/26 (69.23%), Query Frame = 2
Query:  635 ATASEIAVGAAKGLEYLHEKADPHII 712
            A   +IA+GAA+GL +LH    PHII
Sbjct:  959 AARKKIAIGAARGLAFLHHSCIPHII 984          
BLAST of FC930101 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.012e-20
Identity = 45/105 (42.86%), Postives = 64/105 (60.95%), Query Frame = 3
Query:  294 ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIK-KLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVK 605
            IS+  L+E T+NF     +G GS+G VYYG +K G   A+K   D S   + +F+ +V+++SR+ H N V L+GYC +   R+L YE+  NGSL D LHG    K
Sbjct:  596 ISLPVLEEATDNFSKK--VGRGSFGSVYYGRMKDGKEVAVKITADPSSHLNRQFVTEVALLSRIHHRNLVPLIGYCEEADRRILVYEYMHNGSLGDHLHGSSDYK 698          

HSP 2 Score: 30.8018 bits (68), Expect = 1.012e-20
Identity = 15/25 (60.00%), Postives = 17/25 (68.00%), Query Frame = 2
Query:  638 TASEIAVGAAKGLEYLHEKADPHII 712
            T  +IA  AAKGLEYLH   +P II
Sbjct:  704 TRLQIAQDAAKGLEYLHTGCNPSII 728          
The following BLAST results are available for this feature:
BLAST of FC930101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
PTI1_SOLLC2.990e-7674.12Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]
Y2706_ARATH7.224e-7271.26Probable receptor-like protein kinase At2g47060 OS... [more]
Y2197_ARATH9.401e-4750.00Probable protein kinase At2g41970 OS=Arabidopsis t... [more]
BRI1_ARATH1.078e-2344.35Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
PBS1_ARATH6.916e-2336.99Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
BRI1_SOLLC2.536e-2237.33Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
BRI1_SOLPE3.299e-2238.73Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
Y5977_ARATH5.978e-2142.45Probable leucine-rich repeat receptor-like protein... [more]
BRL1_ARATH7.747e-2137.50Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
Y1677_ARATH1.012e-2042.86Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC34003G09EF PostHarvC1 Citrus clementina cDNA clone C34003G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930101 ID=FC930101; Name=FC930101; organism=Citrus clementina; type=EST; length=740bp
GATCGTCGTCTTATCCTGCGCACCTCACGCCGGCTCCAGAGTGATTCATT
CAAAATATCCAGCTCGTTGCTTTTCTCTATATCTCAGCTAGCTTTCATAG
AGGGGCATTATTGTGGCAGTGAATCATGAGCTGCTTCGGCTGTTGTGAAG
AAGATGATATGCATAAAGCTGCTGACAATGGCAATGCATACATGGTTAAA
AGTTCAGCAGGAACTGATGGAGCCTATCATGCATCTGAAGCAGCACCTAA
GGGTGCTCAAGCTGTGAAAGTCCAGCCCATTGAAGTCCCAGCAATTTCAG
TGGATGAATTGAAGGAAATTACTGAGAACTTTGGGACTAATGCTTTGATT
GGAGAAGGTTCATATGGAAGAGTATATTATGGGATTCTTAAAAGTGGACA
TGCTGCAGCAATAAAAAAGTTGGATGCCAGCAAGCAACCTGATGAGGAGT
TTTTAGCACAGGTTTCCATGGTATCAAGGTTGAAGCATGAAAACTTTGTT
CAGCTGCTCGGGTATTGTGTTGATGGGACTTCCCGTGTGCTTGCCTACGA
GTTTGCATCTAATGGATCTCTTCATGATATTCTTCATGGGAGGAAAGGTG
TAAAAGGAGCTCAGCCTGGTCCTGTTTTGTCATGGCAACAGCGAGTGAAA
TTGCTGTAGGGGCTGCGAAAGGGCTTGAATACTTGCATGAGAAGGCAGAT
CCTCATATTATCATCGCGATATTAAGTCCAGCATGTACTA
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