FC930118
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930118 vs. ExPASy Swiss-Prot
Match: IPO4_HUMAN (Importin-4 OS=Homo sapiens GN=IPO4 PE=1 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 9.587e-18 Identity = 62/240 (25.83%), Postives = 110/240 (45.83%), Query Frame = 3 Query: 3 SIVEIISDYGYMAVEP--YMSRLVDATLLLLREESTCQQPXXXXXXXXXXXXXXXEVIMDAVSDLLPAFAKSMGLH-FAPIFAKLFDPLMKFAKSSRPLQDRTMVVATLAEVARDMGSPIAAYVDRVMPLVLKELASPDAMNRRNAAFCVGELCKNGGESALKYYGDILRGLYPLFGDSEPDDAVRDNAAGAVARMIMVNPQSIXXXXXXXXXXXXXXXREDFEESMAVYNCISTLVLSS 713 ++ ++ G + ++P ++ L +L+ ++ CQ ++++ + +PA A + G FAP FA L+ K + +++ V TLAE + +G+ A +V R++P++L D R NA F +G L ++GG A +++ +L L+PL E D VRDN GA+AR++M +P +ED EE + + S L SS Sbjct: 774 ALTGVLRSCGTLTLKPPGRLAELCGVLKAVLQRKTACQDTDEEEEEEDDDQAEYDAMLLEHAGEAIPALAAAAGGDSFAPFFAGFLPLLVCKTKQGCTVAEKSFAVGTLAETIQGLGAASAQFVSRLLPVLLSTAQEADPEVRSNAIFGMGVLAEHGGHPAQEHFPKLLGLLFPLLA-RERHDRVRDNICGALARLLMASPTRKPEPQVLAALLHALPLKEDLEEWVTIGRLFSFLYQSS 1012
BLAST of FC930118 vs. ExPASy Swiss-Prot
Match: IPO4_MOUSE (Importin-4 OS=Mus musculus GN=Ipo4 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.789e-17 Identity = 64/236 (27.12%), Postives = 110/236 (46.61%), Query Frame = 3 Query: 3 SIVEIISDYGYMAVEP--YMSRLVDATLLLLREESTCQQPXXXXXXXXXXXXXXXEVIMDAVSDLLPAFAKSMGLH-FAPIFAKLFDPLMKFAKSSRPLQDRTMVVATLAEVARDMGSPIAAYVDRVMPLVLKELASPDAMNRRNAAFCVGELCKNGGESALKYYGDILRGLYPLFGDSEPDDAVRDNAAGAVARMIMVNPQSIXXXXXXXXXXXXXXXREDFEESMAVYNCISTL 701 S+ ++ G +A++P +S L + +L++++ CQ ++++ + +P A + G H FAP FA L+ K S + +++ V TLAE + +G+ A +V R+ P++L D R NA F +G L ++GG A ++ +L L PL E D VRDN GA+AR++M +P +ED EE + + + S L Sbjct: 776 SLTGVLRTCGSLALQPPGRLSELCNVLKAVLQKKTACQDAEEDDDEDDDQAEYDA-MLLEHAGEAIPVLAATAGGHAFAPFFATFLPLLLCKTKQSCTVAEKSFAVGTLAESIQGLGTASAQFVSRLFPVLLNNAREADPEVRSNAIFGLGVLAEHGGCPAQDHFPKLLGLLLPLLA-RERHDRVRDNICGALARVLMASPVGKTEPQVLATLLRALPLKEDMEEWLTIGHLFSFL 1009
BLAST of FC930118 vs. ExPASy Swiss-Prot
Match: IMB4_SCHPO (Probable importin subunit beta-4 OS=Schizosaccharomyces pombe GN=kap123 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.286e-13 Identity = 52/184 (28.26%), Postives = 85/184 (46.20%), Query Frame = 3 Query: 165 VIMDAVSDLLPAFAKSMGLHFAPIFAKLFDPLMKFAKSSRPLQDRTMVVATLAEVARDMGSPIAAYVDRVMPLVLKELASPDAMNRRNAAFCVGELCKNGGESALKYYGDILRGLYPLFGDSEPDDAVRDNAAGAVARMIMVNPQSIXXXXXXXXXXXXXXXREDFEESMAVYNCISTLVLSSN 716 +++D+ D++ A A ++G FA F + ++K+ S +R M VA + EVA + S I + V L + L + R NAA+ +G LC+ E Y +IL+ L P F E DNA G ++R+I+ N +I +ED+ E+ +Y+ I L N Sbjct: 827 LLIDSACDVVIALAVALGGSFADSFKVFYPQIVKYYMSKNG-NERAMAVACVGEVAGGIESAITPFTRDVFSLFMAALEDSEGEVRSNAAYSMGLLCQFSTEDLSSEYLNILQKLQPFF-TQEVFRTALDNAIGCISRLILHNQNAIPVDQVLPIVFSKLPLKEDYLENAPLYHMILALYRQQN 1008 The following BLAST results are available for this feature:
BLAST of FC930118 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930118 ID=FC930118; Name=FC930118; organism=Citrus clementina; type=EST; length=718bpback to top |