FC930120

Overview
NameFC930120
Unique NameFC930120
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930120 vs. ExPASy Swiss-Prot
Match: MCA1_ARATH (Metacaspase-1 OS=Arabidopsis thaliana GN=AMC1 PE=1 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 1.545e-84
Identity = 147/219 (67.12%), Postives = 172/219 (78.54%), Query Frame = 2
Query:   53 MLVDCSKCRTTLQLPPGAQSIRCAICQAITHIADPRXXXXXXXXXXXXXXXXXXXXXXAVAPSPYNHAPPGQPPHAQGRKRALIVGVSYRHTNHELKGCINDARCMKYMLTNRFKFPESSIVMLTEEDPDPLKRPTKYNMRMALYWLIQGCQPGDSLLFHFSGHGSQQRNYNGEEVDGYDETLCPVDFETQGMIVDDEINATLVRPLPRGARLHAIIDA 709
            MLV+CS CRT LQLP GA+SIRCA+CQA+THIADPR                      A +P P  HAPPGQ PH  GRKRA+I G+SYR + HELKGCINDA+CM+++L N+FKF   SI+MLTEE+ DP + PTK NMRMALYWL+QGC  GDSL+FH+SGHGS+QRNYNG+EVDGYDETLCP+DFETQGMIVDDEINAT+VRPLP G +LH+IIDA
Sbjct:   14 MLVNCSGCRTPLQLPSGARSIRCALCQAVTHIADPRTAPPPQPSS-------------APSPPPQIHAPPGQLPHPHGRKRAVICGISYRFSRHELKGCINDAKCMRHLLINKFKFSPDSILMLTEEETDPYRIPTKQNMRMALYWLVQGCTAGDSLVFHYSGHGSRQRNYNGDEVDGYDETLCPLDFETQGMIVDDEINATIVRPLPHGVKLHSIIDA 219          
BLAST of FC930120 vs. ExPASy Swiss-Prot
Match: MCA2_ARATH (Metacaspase-2 OS=Arabidopsis thaliana GN=AMC2 PE=2 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 3.342e-71
Identity = 136/255 (53.33%), Postives = 163/255 (63.92%), Query Frame = 2
Query:   47 MLMLVDCSKCRTTLQLPPGAQSIRCAICQAITHIA-DPRXXXXXXXXXXXXXXXXXXXXXXAVAP---------------------------------SPYNHAPPGQPPHAQGRKRALIVGVSYRHTNHELKGCINDARCMKYMLTNRFKFPESSIVMLTEEDPDPLKRPTKYNMRMALYWLIQGCQPGDSLLFHFSGHGSQQRNYNGEEVDGYDETLCPVDFETQGMIVDDEINATLVRPLPRGARLHAIIDA 709
            ML+LVDCS CRT L LPPGA  IRCAIC A T IA +PR                         P                                 SP+NHAPPG PP   G+KRA+IVGVSY++T  ELKGCINDA CMK+ML  RF+FPES I+MLTEE+ DP++ PTK N+ MA++WL+  C+PGDSL+FHFSGHG+ Q + NG+EVDG+DETL PVD  T G+IVDDEINAT+VRPLP G +LHAI+DA
Sbjct:    1 MLLLVDCSSCRTPLHLPPGATRIRCAICHAFTLIAPEPRLQSHASASPFPFPNSSPAPSTFIYPPPTPSPYTHAPHAPSPFNHAPPDSYPFTHAPPASSPFNHAPPGPPPPVHGQKRAVIVGVSYKNTKDELKGCINDANCMKFMLMKRFQFPESCILMLTEEEADPMRWPTKNNITMAMHWLVLSCKPGDSLVFHFSGHGNNQMDDNGDEVDGFDETLLPVDHRTSGVIVDDEINATIVRPLPYGVKLHAIVDA 255          
BLAST of FC930120 vs. ExPASy Swiss-Prot
Match: MCA3_ARATH (Metacaspase-3 OS=Arabidopsis thaliana GN=AMC3 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.412e-45
Identity = 92/222 (41.44%), Postives = 134/222 (60.36%), Query Frame = 2
Query:   71 KCRTTLQLPPGAQSIRCAICQAITHI---------ADPRXXXXXXXXXXXXXXXXXXXXXXAVAPSPYNHAPPGQPPHAQGRKRALIVGVSYRHTNHELKGCINDARCMKYMLTNRFKFPESSIVMLTEEDPDPLKRPTKYNMRMALYWLIQGCQPGDSLLFHFSGHGSQQRNYNGEEVDGYDETLCPVDFETQGMIVDDEINATLVRPLPRGARLHAIIDA 709
            +C   + + P A++++C+ C  +T +         A+                         +A  P     P   P   G+KRA++ GV+Y+  ++ LKGCI+DA+ M+ +L  +  FP  SI+MLTE++  P + PTK N+R A+ WL++G +  DSL+FHFSGHGSQQ +YNG+E+DG DE LCP+D ET+G I+DDEIN  LVRPL  GA+LHA+IDA
Sbjct:   10 RCGRRMWVQPDARTVQCSTCHTVTQLYSLVDIARGANRIIHGFQQLLRQHQPQHHEQQQQQMMAQPPPRLLEPLPSPF--GKKRAVLCGVNYKGKSYSLKGCISDAKSMRSLLVQQMGFPIDSILMLTEDEASPQRIPTKRNIRKAMRWLVEGNRARDSLVFHFSGHGSQQNDYNGDEIDGQDEALCPLDHETEGKIIDDEINRILVRPLVHGAKLHAVIDA 229          
BLAST of FC930120 vs. ExPASy Swiss-Prot
Match: MCA1_ASHGO (Metacaspase-1 OS=Ashbya gossypii GN=MCA1 PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.674e-38
Identity = 74/156 (47.44%), Postives = 109/156 (69.87%), Query Frame = 2
Query:  242 PYNHAPPGQPPHAQGRKRALIVGVSYRHTNHELKGCINDARCMKYMLTNRFKFPESSIVMLTEEDPDPLKRPTKYNMRMALYWLIQGCQPGDSLLFHFSGHGSQQRNYNGEEVDGYDETLCPVDFETQGMIVDDEINATLVRPLPRGARLHAIIDA 709
            P N +   Q     G ++AL++G++Y +++ EL+GCIND + +K  L +R+ + E ++V+LT++  DP++ PTK N+  A++WL+QG QP DSL  H+SGHG +  + +G+E DG D TL PVDFET G IVDDEI+  LV+PL  G RL A+IDA
Sbjct:  138 PGNRSVEYQYSQCTGNRKALLIGINYFNSSAELRGCINDVQNIKNFLISRYGYREENMVILTDDQHDPVRIPTKANILRAMHWLVQGAQPNDSLFLHYSGHGGETEDLDGDEQDGKDSTLYPVDFETNGHIVDDEIHDILVKPLAPGVRLTALIDA 293          
BLAST of FC930120 vs. ExPASy Swiss-Prot
Match: MCA1_USTMA (Metacaspase-1 OS=Ustilago maydis GN=MCA1 PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.326e-35
Identity = 67/143 (46.85%), Postives = 101/143 (70.63%), Query Frame = 2
Query:  281 QGRKRALIVGVSYRHTNHELKGCINDARCMKYMLTNRFKFPESSIVMLTEEDPDPLKRPTKYNMRMALYWLIQGCQPGDSLLFHFSGHGSQQRNYNGEEVDGYDETLCPVDFETQGMIVDDEINATLVRPLPRGARLHAIIDA 709
            QG+++AL++G++Y   N EL+GCIND R ++  L  R  + +  +V+LT++  D    PT+ NM  A++WL++G QPGD+L FH+SGHG Q +   G+E DGY+ET+ P+D++  G I DDE++A +VRPLP G RL AI D+
Sbjct:  107 QGKRKALLIGINYFGQNGELRGCINDVRNVQNFLRQR-GYKDDDMVVLTDDQRDARSIPTRQNMTAAMHWLVRGAQPGDALFFHYSGHGGQAKATQGDEADGYNETIIPLDYQQAGQIEDDELHAIMVRPLPVGCRLTAIFDS 248          
BLAST of FC930120 vs. ExPASy Swiss-Prot
Match: MCA1_COCIM (Metacaspase-1 OS=Coccidioides immitis GN=MCA1 PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.326e-35
Identity = 68/159 (42.77%), Postives = 104/159 (65.41%), Query Frame = 2
Query:  233 APSPYNHAPPGQPPHAQGRKRALIVGVSYRHTNHELKGCINDARCMKYMLTNRFKFPESSIVMLTEEDPDPLKRPTKYNMRMALYWLIQGCQPGDSLLFHFSGHGSQQRNYNGEEVDGYDETLCPVDFETQGMIVDDEINATLVRPLPRGARLHAIIDA 709
            AP  Y++    Q  +  G+++AL++G++Y     +L+GCIND + M   L   F +    +V+LT++  +P+ +PTK N+  A++WL++  +P DSL FH+SGHG Q  + +G+E DGYDE + PVDF   G IVDDE++  +VRPLP G RL AI D+
Sbjct:  154 APQGYSY----QYSNCTGKRKALLIGINYFGQRGQLRGCINDVKNMSTYLNQSFNYAREDMVILTDDQQNPMSQPTKANILRAMHWLVKDARPNDSLFFHYSGHGGQTPDLDGDEDDGYDEVIYPVDFRNAGHIVDDEMHRIMVRPLPAGVRLTAIFDS 308          
BLAST of FC930120 vs. ExPASy Swiss-Prot
Match: MCA1B_NEUCR (Metacaspase-1B OS=Neurospora crassa GN=mca-2 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.955e-35
Identity = 70/173 (40.46%), Postives = 102/173 (58.96%), Query Frame = 2
Query:  248 NHAPPGQPPHA-------------------QGRKRALIVGVSYRHTNHELKGCINDARCMKYMLTNRFKFPESSIVMLTEEDPDPLKRPTKYNMRMALYWLIQGCQPGDSLLFHFSGHGSQQRNYNGEEVDGYDETLCPVDFETQGMIVDDEINATLVRPLPRGARLHAIIDA 709
            NH  P  PP A                    GR +AL++G++Y     +L+GCIND R M   L   F++    +V+LT++  +P+ +PTK N+  A++WL++  +P DSL FH+SGHG Q ++ +G+E DGYDE + PVDF   G I DDE++  +VRPL  G RL AI D+
Sbjct:   95 NHQAPPPPPQAPQQFGYGAPADYAFRYSQCNGRHKALLIGINYFGQRGQLRGCINDVRNMSSYLVEHFRYKREDMVILTDDQQNPMSQPTKQNILRAMHWLVKDARPNDSLFFHYSGHGGQTKDLDGDEEDGYDEVIYPVDFRQVGHITDDEMHRIMVRPLQAGVRLTAIFDS 267          
BLAST of FC930120 vs. ExPASy Swiss-Prot
Match: MCA1A_ASPNC (Metacaspase-1A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=casA PE=3 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 5.040e-35
Identity = 68/159 (42.77%), Postives = 102/159 (64.15%), Query Frame = 2
Query:  233 APSPYNHAPPGQPPHAQGRKRALIVGVSYRHTNHELKGCINDARCMKYMLTNRFKFPESSIVMLTEEDPDPLKRPTKYNMRMALYWLIQGCQPGDSLLFHFSGHGSQQRNYNGEEVDGYDETLCPVDFETQGMIVDDEINATLVRPLPRGARLHAIIDA 709
            AP  YN     Q     G+++AL++G++Y +   +L+GCIND + M   L   F +    +V+LT++  +P+ +PTK N+  A++WL++  QP DSL FH+SGHG Q  + +G+E DGYDE + PVDF   G IVDDE++  +V+PL  G RL AI D+
Sbjct:  101 APQGYNF----QYSRCTGKRKALLIGINYFNQKGQLRGCINDVKNMSTYLNQNFGYAREDMVVLTDDQQNPMSQPTKANILRAMHWLVKDAQPNDSLFFHYSGHGGQTPDLDGDEDDGYDEVIYPVDFRAAGHIVDDEMHRIMVKPLQPGVRLTAIFDS 255          
BLAST of FC930120 vs. ExPASy Swiss-Prot
Match: MCA1_YEAST (Metacaspase-1 OS=Saccharomyces cerevisiae GN=MCA1 PE=1 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 6.583e-35
Identity = 67/150 (44.67%), Postives = 102/150 (68.00%), Query Frame = 2
Query:  260 PGQPPHAQGRKRALIVGVSYRHTNHELKGCINDARCMKYMLTNRFKFPESSIVMLTEEDPDPLKRPTKYNMRMALYWLIQGCQPGDSLLFHFSGHGSQQRNYNGEEVDGYDETLCPVDFETQGMIVDDEINATLVRPLPRGARLHAIIDA 709
            P Q     GR++ALI+G++Y  + ++L+GCINDA  +   LTN + +    IV+LT++  D ++ PT+ NM  A+ WL++  QP DSL  H+SGHG Q  + +G+E DG D+ + PVDFETQG I+DDE++  +V+PL +G RL A+ D+
Sbjct:  126 PYQYSQCTGRRKALIIGINYIGSKNQLRGCINDAHNIFNFLTNGYGYSSDDIVILTDDQNDLVRVPTRANMIRAMQWLVKDAQPNDSLFLHYSGHGGQTEDLDGDEEDGMDDVIYPVDFETQGPIIDDEMHDIMVKPLQQGVRLTALFDS 275          
BLAST of FC930120 vs. ExPASy Swiss-Prot
Match: MCA1_YEAS7 (Metacaspase-1 OS=Saccharomyces cerevisiae (strain YJM789) GN=MCA1 PE=3 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 6.583e-35
Identity = 67/150 (44.67%), Postives = 102/150 (68.00%), Query Frame = 2
Query:  260 PGQPPHAQGRKRALIVGVSYRHTNHELKGCINDARCMKYMLTNRFKFPESSIVMLTEEDPDPLKRPTKYNMRMALYWLIQGCQPGDSLLFHFSGHGSQQRNYNGEEVDGYDETLCPVDFETQGMIVDDEINATLVRPLPRGARLHAIIDA 709
            P Q     GR++ALI+G++Y  + ++L+GCINDA  +   LTN + +    IV+LT++  D ++ PT+ NM  A+ WL++  QP DSL  H+SGHG Q  + +G+E DG D+ + PVDFETQG I+DDE++  +V+PL +G RL A+ D+
Sbjct:  126 PYQYSQCTGRRKALIIGINYIGSKNQLRGCINDAHNIFNFLTNGYGYSSDDIVILTDDQNDLVRVPTRANMIRAMQWLVKDAQPNDSLFLHYSGHGGQTEDLDGDEEDGMDDVIYPVDFETQGPIIDDEMHDIMVKPLQQGVRLTALFDS 275          
The following BLAST results are available for this feature:
BLAST of FC930120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
MCA1_ARATH1.545e-8467.12Metacaspase-1 OS=Arabidopsis thaliana GN=AMC1 PE=1... [more]
MCA2_ARATH3.342e-7153.33Metacaspase-2 OS=Arabidopsis thaliana GN=AMC2 PE=2... [more]
MCA3_ARATH2.412e-4541.44Metacaspase-3 OS=Arabidopsis thaliana GN=AMC3 PE=2... [more]
MCA1_ASHGO1.674e-3847.44Metacaspase-1 OS=Ashbya gossypii GN=MCA1 PE=3 SV=1[more]
MCA1_USTMA1.326e-3546.85Metacaspase-1 OS=Ustilago maydis GN=MCA1 PE=3 SV=1[more]
MCA1_COCIM1.326e-3542.77Metacaspase-1 OS=Coccidioides immitis GN=MCA1 PE=3... [more]
MCA1B_NEUCR2.955e-3540.46Metacaspase-1B OS=Neurospora crassa GN=mca-2 PE=3 ... [more]
MCA1A_ASPNC5.040e-3542.77Metacaspase-1A OS=Aspergillus niger (strain CBS 51... [more]
MCA1_YEAST6.583e-3544.67Metacaspase-1 OS=Saccharomyces cerevisiae GN=MCA1 ... [more]
MCA1_YEAS76.583e-3544.67Metacaspase-1 OS=Saccharomyces cerevisiae (strain ... [more]

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Properties
Property NameValue
Genbank descriptionC34004A04EF PostHarvC1 Citrus clementina cDNA clone C34004A04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930120 ID=FC930120; Name=FC930120; organism=Citrus clementina; type=EST; length=711bp
GAATTACTTTTCTCCGTCTTAAAAGACGAAGACCAACAACGCCACAATGT
TAATGCTCGTGGACTGTTCCAAATGCCGCACGACGTTACAGCTCCCGCCT
GGGGCCCAGTCAATCCGCTGCGCCATCTGCCAAGCCATCACCCACATCGC
CGACCCTCGATCCGGCCCTCCTCCTCCCTCCTCCTCCCCCTCCTCCTCTT
ATCAGCCCGGTCAGGTGCCTCCTTCCGCTGTCGCTCCCTCGCCTTACAAC
CACGCGCCCCCCGGCCAACCTCCCCACGCGCAGGGCCGCAAGAGAGCCTT
GATCGTCGGCGTTTCCTATAGGCACACCAATCATGAGCTCAAGGGTTGTA
TCAACGACGCCAGGTGCATGAAGTACATGCTCACCAACCGCTTTAAGTTC
CCTGAATCCTCCATCGTCATGCTCACCGAAGAAGATCCCGATCCCTTAAA
GCGGCCTACCAAATATAACATGAGAATGGCGTTGTATTGGCTTATTCAAG
GTTGTCAACCTGGAGACTCACTGCTTTTCCATTTTTCTGGTCACGGTTCA
CAACAGAGGAATTACAATGGTGAGGAGGTTGATGGATATGATGAAACTCT
TTGTCCAGTGGATTTCGAAACCCAAGGAATGATTGTCGATGATGAGATCA
ACGCAACTCTAGTCCGGCCTCTTCCTCGTGGGGCCAGGCTTCATGCAATT
ATAGATGCTTG
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