FC930126
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930126 vs. ExPASy Swiss-Prot
Match: KCS19_ARATH (3-ketoacyl-CoA synthase 19 OS=Arabidopsis thaliana GN=KCS19 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 8.916e-35 Identity = 80/178 (44.94%), Postives = 112/178 (62.92%), Query Frame = 3 Query: 102 DQLPNFVASAK---GKPGFHYLISNALYLLLIPLFVIVLTYDLFSTLSTIYDLFQIWNELSFKFDNXXXXXXXXXXXXXXXFTTIYLMSRPKNVYLVNFSCYKPDPSRMCTRESFLQIASQTGKFSDETLDFKKKILERSGIGNMTYGPKSLMENPAENGNMEEARKETEGVIIGAVD 626 + LPNF+ S + K G+HYLISNALY+LL+PL + +L S TI DL ++N L F F +T Y +RP+ V+L++FSCYKPDPS +CTRE+F+ + + G F+++ L F++KILERSG+G TY P++L+ P N MEEARKE E V+ GA+D Sbjct: 26 NNLPNFLLSVRLKYVKLGYHYLISNALYILLLPLLAATIA-NLSSF--TINDLSLLYNTLRFHF-----LSATLATALLISLSTAYFTTRPRRVFLLDFSCYKPDPSLICTRETFMDRSQRVGIFTEDNLAFQQKILERSGLGQKTYFPEALLRVP-PNPCMEEARKEAETVMFGAID 194 HSP 2 Score: 28.8758 bits (63), Expect = 8.916e-35 Identity = 14/16 (87.50%), Postives = 14/16 (87.50%), Query Frame = 2 Query: 632 LGKTGVKPKAIGILVV 679 L KTGVKPK IGILVV Sbjct: 197 LEKTGVKPKDIGILVV 212
BLAST of FC930126 vs. ExPASy Swiss-Prot
Match: KCS11_ARATH (3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana GN=KCS11 PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 5.060e-32 Identity = 75/177 (42.37%), Postives = 108/177 (61.02%), Query Frame = 3 Query: 108 LPNFVASAK---GKPGFHYLISNALYLLLIPLFVIVLTYDLFSTLSTIYDLFQIWNELSFKFDNXXXXXXXXXXXXXXXFTTIYLMSRPKNVYLVNFSCYKPDPSRMCTRESFLQIASQTGKFSDETLDFKKKILERSGIGNMTYGPKSLMENPAENGNMEEARKETEGVIIGAVDE 629 LP+F S K K G+HYLI++ +YL L PL +++ ST S + DL +W L + + TIY M+RP+ VYLVNFSC+KPD SR CT++ F+ + TG F++E L+F++KIL+RSG+G TY P++++ P N M+EARKE E V+ GA+DE Sbjct: 17 LPDFKKSVKLKYVKLGYHYLITHGMYLFLSPLVLVIAAQ--ISTFS-VTDLRSLWEHLQYNLISVVVCSMLLVF-----LMTIYFMTRPRPVYLVNFSCFKPDESRKCTKKIFMDRSKLTGSFTEENLEFQRKILQRSGLGESTYLPEAVLNVP-PNPCMKEARKEAETVMFGAIDE 184 HSP 2 Score: 25.0238 bits (53), Expect = 5.060e-32 Identity = 11/16 (68.75%), Postives = 12/16 (75.00%), Query Frame = 2 Query: 632 LGKTGVKPKAIGILVV 679 L KT V PK IGIL+V Sbjct: 186 LAKTNVNPKDIGILIV 201
BLAST of FC930126 vs. ExPASy Swiss-Prot
Match: KCS17_ARATH (3-ketoacyl-CoA synthase 17 OS=Arabidopsis thaliana GN=KCS17 PE=2 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 8.575e-32 Identity = 73/177 (41.24%), Postives = 111/177 (62.71%), Query Frame = 3 Query: 105 QLPNFVASAK---GKPGFHYLISNALYLLLIPLFVIVLTYDLFSTLSTIYDLFQIWNELSFKFDNXXXXXXXXXXXXXXXFTTIYLMSRPKNVYLVNFSCYKPDPSRMCTRESFLQIASQTGKFSDETLDFKKKILERSGIGNMTYGPKSLMENPAENGNMEEARKETEGVIIGAVD 626 +LPNF+ S + K G+HYLISNA+Y+L++P+ ++ T FS + DL ++N L KF TT+Y +RP+ ++L++F+CYKPD S +CTRE+F+ + + G F+++ L F++KILERSG+G TY P++L+ P N M EARKE E V+ GA+D Sbjct: 21 KLPNFLLSVRLKYVKLGYHYLISNAVYILILPVGLLAATSSSFS----LTDLTLLYNHL-LKFH---FLSSTLFAALLIFLTTLYFTTRPRRIFLLDFACYKPDSSLICTRETFMDRSQRVGIFTEDNLAFQQKILERSGLGQKTYFPEALLRVP-PNPCMSEARKEAETVMFGAID 188 HSP 2 Score: 26.9498 bits (58), Expect = 8.575e-32 Identity = 13/16 (81.25%), Postives = 13/16 (81.25%), Query Frame = 2 Query: 632 LGKTGVKPKAIGILVV 679 L KTGV PK IGILVV Sbjct: 191 LEKTGVNPKDIGILVV 206
BLAST of FC930126 vs. ExPASy Swiss-Prot
Match: KCS10_ARATH (3-ketoacyl-CoA synthase 10 OS=Arabidopsis thaliana GN=FDH PE=1 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.146e-27 Identity = 70/179 (39.11%), Postives = 109/179 (60.89%), Query Frame = 3 Query: 105 QLPNFVASAK---GKPGFHYLISNALYLLLIPLFVIVLTYDLFSTLSTIYDLFQIWNELSFKFDNXXXXXXXXXXXXXXXFTTIYLMSRPKNVYLVNFSCYKPDPSRMCTRESFLQIASQTGKFSDETLDFKKKILERSGIGNMTYGPKSLMENPAEN-GNMEEARKETEGVIIGAVDE 629 +LP+F+ S K G+HYLI++A+YL IP+ V+V + ++ S +IW +L + +D +Y MSRP++VYL++F+CYKP T+E F+++A ++GKF +ETL FKK+IL+ SGIG+ TY P+S+ + +EN M+E R+E VI GA+DE Sbjct: 38 RLPDFLQSVNLKYVKLGYHYLINHAVYLATIPVLVLVFSAEVGSLSRE-----EIWKKL-WDYD---LATVIGFFGVFVLTACVYFMSRPRSVYLIDFACYKPSDEHKVTKEEFIELARKSGKFDEETLGFKKRILQASGIGDETYVPRSI--SSSENITTMKEGREEASTVIFGALDE 205 HSP 2 Score: 24.2534 bits (51), Expect = 1.146e-27 Identity = 10/14 (71.43%), Postives = 12/14 (85.71%), Query Frame = 2 Query: 638 KTGVKPKAIGILVV 679 KT VKPK +G+LVV Sbjct: 209 KTRVKPKDVGVLVV 222
BLAST of FC930126 vs. ExPASy Swiss-Prot
Match: KCS9_ARATH (3-ketoacyl-CoA synthase 9 OS=Arabidopsis thaliana GN=KCS9 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.459e-23 Identity = 66/181 (36.46%), Postives = 104/181 (57.46%), Query Frame = 3 Query: 96 QKDQLPNFVASAKGKP---GFHYLISNALYLLLIPLFVIVLTYDLFSTLSTIYDLFQIWNELSFKFDNXXXXXXXXXXXXXXXFTTIYLMSRPKNVYLVNFSCYKPDPSRMCTRESFLQIASQTGKFSDETLDFKKKILERSGIGNMTYGPKSLMENPAENGNMEEARKETEGVIIGAVDE 629 ++ +LPNF+ S K G+HYLI++ L L+PL +++T S L+T DL+QIW L + +T+Y+MSRP++VYLV++SCY P S + F+ + F++ +L+F++KILERSG+G TY P++L P M AR+E+E V+ GA+D+ Sbjct: 21 ERRKLPNFLQSVNMKYVKLGYHYLITHLFKLCLVPLMAVLVTE--ISRLTTD-DLYQIWLHLQYNL-----VAFIFLSALAIFGSTVYIMSRPRSVYLVDYSCYLPPESLQVKYQKFMDHSKLIEDFNESSLEFQRKILERSGLGEETYLPEALHCIP-PRPTMMAAREESEQVMFGALDK 192
BLAST of FC930126 vs. ExPASy Swiss-Prot
Match: KCS4_ARATH (3-ketoacyl-CoA synthase 4 OS=Arabidopsis thaliana GN=KCS4 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.617e-22 Identity = 66/180 (36.67%), Postives = 96/180 (53.33%), Query Frame = 3 Query: 96 QKDQLPNFVASAK---GKPGFHYLISNALYLLLIPLFVIVLTYDLFSTLSTIYDLFQIWNELSFKFDNXXXXXXXXXXXXXXXFTTIYLMSRPKNVYLVNFSCYKPDPSRMCTRESFLQIASQTGKFSDETLDFKKKILERSGIGNMTYGPKSLMENPAENGNMEEARKETEGVIIGAVD 626 Q LP+F+ S K G+HYLISN L L L PL V++ + ++ DL Q+W L + + T+Y+M+RP+ VYLV+FSCY P F++ + TG F D L+F++KILERSG+G TY P+++ P +M AR+E E V+ GA+D Sbjct: 25 QTRMLPDFLQSVNLKYVKLGYHYLISNLLTLCLFPLAVVI---SVEASQMNPDDLKQLWIHLQYNLVSIIICSAILVFGL-----TVYVMTRPRPVYLVDFSCYLPPDHLKAPYARFMEHSRLTGDFDDSALEFQRKILERSGLGEDTYVPEAMHYVPPRI-SMAAAREEAEQVMFGALD 195 HSP 2 Score: 23.8682 bits (50), Expect = 1.617e-22 Identity = 11/13 (84.62%), Postives = 11/13 (84.62%), Query Frame = 2 Query: 641 TGVKPKAIGILVV 679 T VKPK IGILVV Sbjct: 201 TNVKPKDIGILVV 213
BLAST of FC930126 vs. ExPASy Swiss-Prot
Match: KCS1_ARATH (3-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana GN=KCS1 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 4.049e-20 Identity = 60/186 (32.26%), Postives = 98/186 (52.69%), Query Frame = 3 Query: 105 QLPNFVASAK---GKPGFHY---LISNALYLLLIPLFVIVL------TYDLFSTLSTIYDLFQIWNELSFKFDNXXXXXXXXXXXXXXXFTTIYLMSRPKNVYLVNFSCYKPDPSRMCTRESFLQIASQTGKFSDETLDFKKKILERSGIGNMTYGPKSLMENPAENGNMEEARKETEGVIIGAVD 626 +LP+ + S K K G H + + +L+++PL VL T+D FS ++W+ + + D T+Y+ +R K VYLV+FSCYKP+ R + +SFL + + G F+D+T+ F+++I R+G+G+ TY P+ + P + NM EAR E E V+ GA+D Sbjct: 33 RLPDLLTSVKLKYVKLGLHNSCNVTTILFFLIILPLTGTVLVQLTGLTFDTFS---------ELWSNQAVQLDTATRLTCLVFLSFVL---TLYVANRSKPVYLVDFSCYKPEDERKISVDSFLTMTEENGSFTDDTVQFQQRISNRAGLGDETYLPRGITSTPPKL-NMSEARAEAEAVMFGALD 205 HSP 2 Score: 25.0238 bits (53), Expect = 4.049e-20 Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 2 Query: 638 KTGVKPKAIGILVV 679 KTG+KP +GIL+V Sbjct: 210 KTGIKPAEVGILIV 223
BLAST of FC930126 vs. ExPASy Swiss-Prot
Match: KCS2_ARATH (Probable 3-ketoacyl-CoA synthase 2 OS=Arabidopsis thaliana GN=KCS2 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.756e-17 Identity = 53/163 (32.52%), Postives = 88/163 (53.99%), Query Frame = 3 Query: 138 KPGFHYLISNALYLLLIPLFVIVLTYDLFSTLSTIYDLFQIWNELSFKFDNXXXXXXXXXXXXXXXFTTIYLMSRPKNVYLVNFSCYKPDPSRMCTRESFLQIASQTGKFSDETLDFKKKILERSGIGNMTYGPKSLMENPAENGNMEEARKETEGVIIGAVD 626 K G+HYLI++ L+ +PL ++ + +L ++ L +N F F + ++ MSRP+++YL+++SCY P S+ + + F+ +S FS+ +L+F++KIL RSG+G TY P S+ P M AR+E E VI GA+D Sbjct: 17 KLGYHYLITHFFKLMFLPLMAVLF---MNVSLLSLNHLQLYYNSTGFIF----------VITLAIVGSIVFFMSRPRSIYLLDYSCYLPPSSQKVSYQKFMNNSSLIQDFSETSLEFQRKILIRSGLGEETYLPDSIHSIP-PRPTMAAAREEAEQVIFGALD 165
BLAST of FC930126 vs. ExPASy Swiss-Prot
Match: KCS6_ARATH (3-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana GN=CUT1 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.696e-16 Identity = 54/177 (30.51%), Postives = 89/177 (50.28%), Query Frame = 3 Query: 108 LPNFVASAK---GKPGFHYLISNALYLLLIPLFVIVLTYDLFSTLSTIYDLFQIWNELSFKFDNXXXXXXXXXXXXXXXFTTIYLMSRPKNVYLVNFSCYKPDPSRMCTRESFLQIASQTGKFSDETLDFKKKILERSGIGNMTYGPKSLMENPAENGNMEEARKETEGVIIGAVDE 629 +P F +S K K G+ YL+++ L LLIP+ IV L ++ +WN L F +T+Y MS+P+ +YLV++SCYKP + +F++ + K ++++F+ +ILERSG+G T P ++ P M+ AR E + VI A+D+ Sbjct: 6 MPEFSSSVKLKYVKLGYQYLVNHFLSFLLIPIMAIVAVELLRMGPE---EILNVWNSLQFDL-----VQVLCSSFFVIFISTVYFMSKPRTIYLVDYSCYKPPVTCRVPFATFMEHSRLILKDKPKSVEFQMRILERSGLGEETCLPPAIHYIP-PTPTMDAARSEAQMVIFEAMDD 173 HSP 2 Score: 23.483 bits (49), Expect = 6.696e-16 Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 2 Query: 638 KTGVKPKAIGILVV 679 KTG+KPK + IL+V Sbjct: 177 KTGLKPKDVDILIV 190
BLAST of FC930126 vs. ExPASy Swiss-Prot
Match: KCS16_ARATH (3-ketoacyl-CoA synthase 16 OS=Arabidopsis thaliana GN=KCS16 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.131e-15 Identity = 63/171 (36.84%), Postives = 88/171 (51.46%), Query Frame = 3 Query: 132 KGKPGFHYLISNALYLLLIPLFVIVLTYDLFSTLSTIYDLFQIWNELSFKFDNXXXXXXXXXXXXXXXFTTIYLMSRPKNVYLVNFSCYKPDPSRMCTRESFLQ---IASQTGKF---SDETLDFKKKILERSGIGNMTYGPKSLMENPAENGNMEEARKETEGVIIGAVD 626 K K F+YL+++ L +PL V + S LST DL + L + +T+YLM+RPK VYLV+FSCY P + + +Q + + G + SD +DF +KILERSG+G TY P+ L P + N+ +R ETE VIIGAVD Sbjct: 7 KVKIFFNYLMAHRFKLCFLPLMVAIAVEA--SRLST-QDLQNFYLYLQNNHTSLTMFFLYLALG-----STLYLMTRPKPVYLVDFSCYLPPSHLKASTQRIMQHVRLVREAGAWKQESDYLMDFCEKILERSGLGQETYVPEGLQTLPLQQ-NLAVSRIETEEVIIGAVD 168 HSP 2 Score: 21.9422 bits (45), Expect = 1.131e-15 Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 2 Query: 641 TGVKPKAIGILVV 679 TG+ P IGILVV Sbjct: 174 TGISPSDIGILVV 186 The following BLAST results are available for this feature:
BLAST of FC930126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930126 ID=FC930126; Name=FC930126; organism=Citrus clementina; type=EST; length=696bpback to top |