FC930131
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930131 vs. ExPASy Swiss-Prot
Match: S2539_RAT (Solute carrier family 25 member 39 OS=Rattus norvegicus GN=Slc25a39 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.836e-11 Identity = 49/150 (32.67%), Postives = 71/150 (47.33%), Query Frame = 2 Query: 314 IIVNPLDVAKTRLQAQAAGVAYSHPLSNLISRMAYF-GPRTMFADLRCSPSCTRAGVHGTVSMCP---------PDCFQYRGTLDVFYKIIRQEGFSRLWRGTNAGLALAVPTVGIYLPCYDVFRNWLEEATDKNAPSATPYVPLVAGSL 733 + + PLDV K RLQ+Q VA + ++Y P T+ + +C C GV + +CP D ++ GTLD F KI+R EG LW G A L + VP IY YD + +L + ++ Y P+VAG+L Sbjct: 27 LFMTPLDVVKVRLQSQRPTVASELTTPSRFWSLSYTKSPSTLQSPGKCLLYCN--GVLEPLYLCPNGTRCATWFQDPTRFTGTLDAFVKIVRHEGTRTLWSGLPATLVMTVPATAIYFTAYDQLKAFL----CGQSLTSDLYAPMVAGAL 170
BLAST of FC930131 vs. ExPASy Swiss-Prot
Match: S2539_HUMAN (Solute carrier family 25 member 39 OS=Homo sapiens GN=SLC25A39 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.132e-11 Identity = 48/150 (32.00%), Postives = 73/150 (48.67%), Query Frame = 2 Query: 314 IIVNPLDVAKTRLQAQAAGVAYSHPLSNLISRMAYFG-PRTMFADLRCSPSCTRAGVHGTVSMCP---------PDCFQYRGTLDVFYKIIRQEGFSRLWRGTNAGLALAVPTVGIYLPCYDVFRNWLEEATDKNAPSATPYVPLVAGSL 733 + + PLDV K RLQ+Q +A S+ + ++Y P ++ + +C C GV + +CP D ++ GT+D F KI+R EG LW G A L + VP IY YD + +L A ++ Y P+VAG+L Sbjct: 27 LFMTPLDVVKVRLQSQRPSMASELMPSSRLWSLSYTKLPSSLQSTGKCLLYCN--GVLEPLYLCPNGARCATWFQDPTRFTGTMDAFVKIVRHEGTRTLWSGLPATLVMTVPATAIYFTAYDQLKAFL----CGRALTSDLYAPMVAGAL 170
BLAST of FC930131 vs. ExPASy Swiss-Prot
Match: S2539_BOVIN (Solute carrier family 25 member 39 OS=Bos taurus GN=SLC25A39 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11 Identity = 50/150 (33.33%), Postives = 70/150 (46.67%), Query Frame = 2 Query: 314 IIVNPLDVAKTRLQAQAAGVAYS-HPLSNLISRMAYFGPRTMFADLRCSPSCTRAGVHGTVSMCP---------PDCFQYRGTLDVFYKIIRQEGFSRLWRGTNAGLALAVPTVGIYLPCYDVFRNWLEEATDKNAPSATPYVPLVAGSL 733 + + PLDV K RLQ+Q VA P S L S P ++ + +C C GV + +CP D ++ GT+D F KI+R EG LW G A L + VP Y YD + +L A ++ Y P+VAG+L Sbjct: 27 LFMTPLDVVKVRLQSQRPSVASELMPPSRLWSLSYAKLPSSLRSTGKCLLYCN--GVLEPLYLCPNGARCATWFQDPTRFTGTMDAFVKIVRHEGTRTLWSGLPATLVMTVPATAAYFTAYDQLKAFL----CGRALTSDLYAPMVAGAL 170 The following BLAST results are available for this feature:
BLAST of FC930131 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930131 ID=FC930131; Name=FC930131; organism=Citrus clementina; type=EST; length=733bpback to top |