FC930140
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930140 vs. ExPASy Swiss-Prot
Match: CCD1_PEA (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Pisum sativum GN=CCD1 PE=2 SV=1) HSP 1 Score: 408.683 bits (1049), Expect = 1.667e-113 Identity = 196/236 (83.05%), Postives = 215/236 (91.10%), Query Frame = 1 Query: 1 MDLPLYFTPKEMVKENKLIFTFDDTKKARFGILPRYAKNEAQMKWFELPNCFIFHNANAWEEEDEVVLITCRLDKPDLDMVNGAVKEKLENFSNELYEMRFNLKTGLASQKRLSASAVDFPRVNECYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPDEEKTKLEVGGNVRGIFDLGPGRFGSEAVFVPREPGTSSEEDDGYLIFFSHDEKTGKSSVNVIDAKTMSADPVAVVEL 708 MDLPLYF PKEMVK LIF+FD TKKARFG+LPRYAK++ ++WFELPNCFIFHNANAWEEEDE+VLITCRL+ P+LD+V GAVKEKL+NFSNELYEMRFN+KTG ASQK+LSAS VDFPRVNE YTGRKQRYVYGT LDSIAKVTGIIKFDLHAEPD KTKLEVGGNV+G++DLGPGRFGSEAV+VPR PGT SEEDDGYLIFF HDE TGKS V+VIDAK MSA+PVAVVEL Sbjct: 282 MDLPLYFRPKEMVKNKTLIFSFDSTKKARFGVLPRYAKDDKHIRWFELPNCFIFHNANAWEEEDEIVLITCRLENPNLDVVGGAVKEKLDNFSNELYEMRFNMKTGEASQKKLSASTVDFPRVNESYTGRKQRYVYGTTLDSIAKVTGIIKFDLHAEPDSGKTKLEVGGNVQGLYDLGPGRFGSEAVYVPRVPGTDSEEDDGYLIFFVHDENTGKSFVHVIDAKRMSAEPVAVVEL 517
BLAST of FC930140 vs. ExPASy Swiss-Prot
Match: CCD_CROSA (Carotenoid 9,10(9',10')-cleavage dioxygenase OS=Crocus sativus GN=CCD PE=1 SV=1) HSP 1 Score: 405.986 bits (1042), Expect = 1.081e-112 Identity = 197/236 (83.47%), Postives = 213/236 (90.25%), Query Frame = 1 Query: 1 MDLPLYFTPKEMVKENKLIFTFDDTKKARFGILPRYAKNEAQMKWFELPNCFIFHNANAWEEEDEVVLITCRLDKPDLDMVNGAVKEKLENFSNELYEMRFNLKTGLASQKRLSASAVDFPRVNECYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPDEEKTKLEVGGNVRGIFDLGPGRFGSEAVFVPREPGTSSEEDDGYLIFFSHDEKTGKSSVNVIDAKTMSADPVAVVEL 708 MDLPLYF PKEMVK KLIF+FD TKKARFG+LPRYAK+++ ++WFELPNCFIFHNANAWEE DEVVLITCRL+ PDLDMVNGAVKEKLENF NELYEMRFN+KTG ASQK+LS SAVDFPR+NE YT RKQRYVYGTILD+I KV GIIKFDLHAEP+ K KLEVGGNV+GIFDLGPGR+GSEAVFVPRE G SEEDDGYLIFF HDE TGKS VNVIDAKTMSA+PVAVVEL Sbjct: 286 MDLPLYFQPKEMVKGGKLIFSFDATKKARFGVLPRYAKDDSLIRWFELPNCFIFHNANAWEEGDEVVLITCRLENPDLDMVNGAVKEKLENFKNELYEMRFNMKTGAASQKQLSVSAVDFPRINESYTTRKQRYVYGTILDNITKVKGIIKFDLHAEPEAGKKKLEVGGNVQGIFDLGPGRYGSEAVFVPRERGIKSEEDDGYLIFFVHDENTGKSEVNVIDAKTMSAEPVAVVEL 521
BLAST of FC930140 vs. ExPASy Swiss-Prot
Match: CCD1_ARATH (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Arabidopsis thaliana GN=CCD1 PE=1 SV=2) HSP 1 Score: 395.586 bits (1015), Expect = 1.282e-109 Identity = 189/236 (80.08%), Postives = 214/236 (90.68%), Query Frame = 1 Query: 1 MDLPLYFTPKEMVKENKLIFTFDDTKKARFGILPRYAKNEAQMKWFELPNCFIFHNANAWEEEDEVVLITCRLDKPDLDMVNGAVKEKLENFSNELYEMRFNLKTGLASQKRLSASAVDFPRVNECYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPDEEKTKLEVGGNVRGIFDLGPGRFGSEAVFVPREPGTSSEEDDGYLIFFSHDEKTGKSSVNVIDAKTMSADPVAVVEL 708 MDLP++F PKEMVKE K+I++FD TKKARFG+LPRYAK+E ++WFELPNCFIFHNANAWEEEDEVVLITCRL+ PDLDMV+G VKEKLENF NELYEMRFN+KTG ASQK+LSASAVDFPR+NECYTG+KQRYVYGTILDSIAKVTGIIKFDLHAE + K LEVGGN++GI+DLG GR+GSEA++VPRE ++EEDDGYLIFF HDE TGKS V VIDAKTMSA+PVAVVEL Sbjct: 282 MDLPMHFRPKEMVKEKKMIYSFDPTKKARFGVLPRYAKDELMIRWFELPNCFIFHNANAWEEEDEVVLITCRLENPDLDMVSGKVKEKLENFGNELYEMRFNMKTGSASQKKLSASAVDFPRINECYTGKKQRYVYGTILDSIAKVTGIIKFDLHAEAETGKRMLEVGGNIKGIYDLGEGRYGSEAIYVPRE---TAEEDDGYLIFFVHDENTGKSCVTVIDAKTMSAEPVAVVEL 514 HSP 2 Score: 22.7126 bits (47), Expect = 1.282e-109 Identity = 7/10 (70.00%), Postives = 8/10 (80.00%), Query Frame = 3 Query: 705 ITHRXPYGFH 734 + HR PYGFH Sbjct: 514 LPHRVPYGFH 523
BLAST of FC930140 vs. ExPASy Swiss-Prot
Match: CCD1_PHAVU (Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Phaseolus vulgaris GN=CCD1 PE=1 SV=1) HSP 1 Score: 394.815 bits (1013), Expect = 2.492e-109 Identity = 191/236 (80.93%), Postives = 207/236 (87.71%), Query Frame = 1 Query: 1 MDLPLYFTPKEMVKENKLIFTFDDTKKARFGILPRYAKNEAQMKWFELPNCFIFHNANAWEEEDEVVLITCRLDKPDLDMVNGAVKEKLENFSNELYEMRFNLKTGLASQKRLSASAVDFPRVNECYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPDEEKTKLEVGGNVRGIFDLGPGRFGSEAVFVPREPGTSSEEDDGYLIFFSHDEKTGKSSVNVIDAKTMSADPVAVVEL 708 MDLPL F PKEMVK LIF+FD TKKARFG+LPRYAK+E ++WFELPNCFIFHNANAWEEEDEVVLITCRL P LD V G V+EKLENFSNELYEMRFN+KTG ASQK+LSAS VDFPRVNE YTGRKQRYVYGT LDSIAKVTGIIKFDLHAEPD K KLEVGGNV+G++DLGPG+FGSEAV++PR PG SEEDDGYL+ F HDE GKS V+VIDAKTMSADPVAVVEL Sbjct: 284 MDLPLIFRPKEMVKNKTLIFSFDSTKKARFGVLPRYAKDEQHIRWFELPNCFIFHNANAWEEEDEVVLITCRLQNPKLDNVGGTVQEKLENFSNELYEMRFNMKTGEASQKKLSASTVDFPRVNENYTGRKQRYVYGTTLDSIAKVTGIIKFDLHAEPDHGKEKLEVGGNVQGLYDLGPGKFGSEAVYIPRVPGIESEEDDGYLVLFVHDENAGKSFVHVIDAKTMSADPVAVVEL 519
BLAST of FC930140 vs. ExPASy Swiss-Prot
Match: CCD4_ARATH (Probable carotenoid cleavage dioxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=CCD4 PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.012e-31 Identity = 78/217 (35.94%), Postives = 126/217 (58.06%), Query Frame = 1 Query: 67 DDTKKARFGILPRYAKNEAQMKWFELPNCFIFHNANAWEEED--EVVLITCRLDKPDLDMVNGAVKEKLENFSNELYEMRFNLKTGLASQKRLSASAVDFPRVNECYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPDEEKTKLEVGGNVRGIFDLGPGRFGSEAVFVPREPGT-SSEEDDGYLIFFSHDEKTGKSSVNVIDAKTMSADPVAVVEL 708 D+ K R G++P+YA +E++MKWFE+P I H NAW+E+D VVLI P++ + + E+++ + +++ +L TG+ + +SA +DF +N + GR RYVY I D + K++G++K D+ ++ T R ++ G G +G E FV R+PG +EEDDGY++ + HDE TG+S V+DAK+ + VA V L Sbjct: 372 DNGKTPRLGVIPKYAGDESEMKWFEVPGFNIIHAINAWDEDDGNSVVLIA-----PNIMSIEHTL-ERMDLVHALVEKVKIDLVTGIVRRHPISARNLDFAVINPAFLGRCSRYVYAAIGDPMPKISGVVKLDVSKGDRDDCTV------ARRMY--GSGCYGGEPFFVARDPGNPEAEEDDGYVVTYVHDEVTGESKFLVMDAKSPELEIVAAVRL 574 HSP 2 Score: 21.557 bits (44), Expect = 3.012e-31 Identity = 7/11 (63.64%), Postives = 8/11 (72.73%), Query Frame = 3 Query: 702 RITHRXPYGFH 734 R+ R PYGFH Sbjct: 573 RLPRRVPYGFH 583
BLAST of FC930140 vs. ExPASy Swiss-Prot
Match: ZCD_CROSA (Zeaxanthin 7,8(7',8')-cleavage dioxygenase, chromoplast OS=Crocus sativus GN=ZCD PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.350e-29 Identity = 82/240 (34.17%), Postives = 129/240 (53.75%), Query Frame = 1 Query: 4 DLPLYFTPKEMVKENKLIFTFDDTKKARFGILPRYAKNEAQMKWFELPNCFIFHNANAWEEE-DEVVLITCRLDKPDLDMVNGAVKEKLENFSNELYEMRFNLKTGLASQKRLSASAVDFPRVNECYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPDEEKTKLEVGGNVRGIF---DLGPGRFGSEAVFVPREPGTS-SEEDDGYLIFFSHDEKTGKSSVNVIDAKTMSADPVAVVEL 708 D+ + P E+V+ ++I D K R G+LPRYA ++++M+WF++P + H NAWEEE EVV+I P++ + A+ ++ + + R LK+G S+ LSA +DF ++ Y+GRK RY Y + D + K+ G++K D E+ G + + G G FG E FVP S EEDDGY++ + HDE G+SS V+DA++ + +A V L Sbjct: 125 DIQIVMKPAEIVRGRRMIGP-DLEKVPRLGLLPRYATSDSEMRWFDVPGFNMVHVVNAWEEEGGEVVVIVA----PNVSPIENAI-DRFDLLHVSVEMARIELKSGSVSRTLLSAENLDFGVIHRGYSGRKSRYAYLGVGDPMPKIRGVVKVD-----------FELAGRGECVVARREFGVGCFGGEPFFVPASSKKSGGEEDDGYVVSYLHDEGKGESSFVVMDARSPELEILAEVVL 347
BLAST of FC930140 vs. ExPASy Swiss-Prot
Match: NCED3_ARATH (9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic OS=Arabidopsis thaliana GN=NCED3 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.266e-28 Identity = 84/252 (33.33%), Postives = 129/252 (51.19%), Query Frame = 1 Query: 4 DLPLYFTPKEMVKENKLIFTFDDTKKARFGILPRYAKNEAQMKWFELPNCFIFHNANAWE--EEDEVVLITCRLDKPDLDMVNGAVKEKLENFSNELYEMRFNLKTGLASQKRLSASA-----VDFPRVNECYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPDEEKTKLEVGGNVRGIFDLGPGRFGSEAVFVPREPGTSSEEDDGYLIFFSHDEKTGKSSVNVIDAKTMSADPVAVVELHI--GXHTDF 732 D + F EM++ + +D K ARFGIL +YA++ + +KW + P+CF FH NAWE E DEVV+I + PD E EN + L E+R NLKTG ++++ + ++ ++ VN GRK ++ Y + + KV+G K DL E K L G R+G E +F+P E G EED+GY++ F HDEKT KS + +++A ++ + + + G H F Sbjct: 359 DQQVVFKLPEMIRGGSPV-VYDKNKVARFGILDKYAEDSSNIKWIDAPDCFCFHLWNAWEEPETDEVVVIGSCMTPPD-----SIFNESDENLKSVLSEIRLNLKTGESTRRPIISNEDQQVNLEAGMVNRNMLGRKTKFAYLALAEPWPKVSGFAKVDL--TTGEVKKHL-----------YGDNRYGGEPLFLPGEGG---EEDEGYILCFVHDEKTWKSELQIVNAVSLEVEATVKLPSRVPYGFHGTF 588
BLAST of FC930140 vs. ExPASy Swiss-Prot
Match: NCED9_ARATH (9-cis-epoxycarotenoid dioxygenase NCED9, chloroplastic OS=Arabidopsis thaliana GN=NCED9 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.203e-28 Identity = 83/249 (33.33%), Postives = 127/249 (51.00%), Query Frame = 1 Query: 4 DLPLYFTPKEMVKENKLIFTFDDTKKARFGILPRYAKNEAQMKWFELPNCFIFHNANAWE--EEDEVVLITCRLDKPDLDMVNGAVKEKLENFSNELYEMRFNLKTGLASQKRLSASAVDFP--RVNECYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPDEEKTKLEVGGNVRGIFDLGPGRFGSEAVFVPREPGTSSEEDDGYLIFFSHDEKTGKSSVNVIDAKTMSADPVAVVELHI--GXHTDF 732 D + F EM++ + +D+ KK+RFGIL + AK+ + ++W E+P+CF FH N+WE E DEVV+I + PD E E + L E+R NLKTG ++++ + + V+ VN GRK RY Y + + KV+G K DL G +R + G G++G E +F+P G EED GY++ F HDE+ KS + +I+A M + + + G H F Sbjct: 419 DQQVVFRLPEMIRGGSPV-VYDEKKKSRFGILNKNAKDASSIQWIEVPDCFCFHLWNSWEEPETDEVVVIGSCMTPPD-----SIFNEHDETLQSVLSEIRLNLKTGESTRRPVISEQVNLEAGMVNRNLLGRKTRYAYLALTEPWPKVSGFAKVDLST------------GEIRK-YIYGEGKYGGEPLFLPSGDG---EEDGGYIMVFVHDEEKVKSELQLINAVNMKLEATVTLPSRVPYGFHGTF 645
BLAST of FC930140 vs. ExPASy Swiss-Prot
Match: NCED1_MAIZE (9-cis-epoxycarotenoid dioxygenase 1, chloroplastic OS=Zea mays GN=VP14 PE=1 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 3.447e-26 Identity = 80/243 (32.92%), Postives = 125/243 (51.44%), Query Frame = 1 Query: 4 DLPLYFTPKEMVKENKLIFTFDDTKKARFGILPRYAKNEAQMKWFELPNCFIFHNANAWEEE--DEVVLITCRLDKPDLDMVNGAVKEKLENFSNELYEMRFNLKTGLASQKRLSASA----VDFPRVNECYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPDEEKTKLEVGGNVRGIFDLGPGRFGSEAVFVPREPGTSSE--EDDGYLIFFSHDEKTGKSSVNVIDAKTMSADPVAVVEL 708 D + F +EM++ + D K +RFG+LP++A + ++M W ++P+CF FH NAWE+E EVV+I + D E E + L E+R + +TG ++++ + + ++ VN GR+ RY Y + + KV+G K DL E TK F+ G GRFG E FVP +P + EDDGY++ F HDE+ G S + V++A M + A V+L Sbjct: 360 DHQVVFKLQEMLRGGSPV-VLDKEKTSRFGVLPKHAADASEMAWVDVPDCFCFHLWNAWEDEATGEVVVIGSCMTPAD-----SIFNESDERLESVLTEIRLDARTGRSTRRAVLPPSQQVNLEVGMVNRNLLGRETRYAYLAVAEPWPKVSGFAKVDLST---GELTK----------FEYGEGRFGGEPCFVPMDPAAAHPRGEDDGYVLTFVHDERAGTSELLVVNAADMRLE--ATVQL 581
BLAST of FC930140 vs. ExPASy Swiss-Prot
Match: NCED5_ARATH (Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic OS=Arabidopsis thaliana GN=NCED5 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.977e-25 Identity = 81/232 (34.91%), Postives = 119/232 (51.29%), Query Frame = 1 Query: 64 FDDTKKARFGILPRYAKNEAQMKWFELPNCFIFHNANAWE--EEDEVVLITCRLDKPDLDMVNGAVKEKLENFSNELYEMRFNLKTGLASQKRLSASAV----DFPRVNECYTGRKQRYVYGTILDSIAKVTGIIKFDLHAEPDEEKTKLEVGGNVRGIFDLGPGRFGSEAVFVPREPGTSSE-EDDGYLIFFSHDEKTGKSSVNVIDAKTMSADPVAVVELHI--GXHTDF 732 +D K +RFGILPR AK+ ++M W E P F FH NAWE E DEVV+I + D E E ++ L E+R NLKTG ++++ + +V + VN GRK RY Y I + KV+G K DL G V+ F G ++G E F+PR G S+ EDDGY++ F HDE++ +S +++++A T+ + + + G H F Sbjct: 368 YDGEKISRFGILPRNAKDASEMVWVESPETFCFHLWNAWESPETDEVVVIGSCMTPAD-----SIFNECDEQLNSVLSEIRLNLKTGKSTRRTIIPGSVQMNLEAGMVNRNLLGRKTRYAYLAIAEPWPKVSGFAKVDLST------------GEVKNHF-YGGKKYGGEPFFLPR--GLESDGEDDGYIMSFVHDEESWESELHIVNAVTLELEATVKLPSRVPYGFHGTF 579 The following BLAST results are available for this feature:
BLAST of FC930140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930140 ID=FC930140; Name=FC930140; organism=Citrus clementina; type=EST; length=734bpback to top |