FC930147
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930147 vs. ExPASy Swiss-Prot
Match: SNP33_ARATH (SNAP25 homologous protein SNAP33 OS=Arabidopsis thaliana GN=SNAP33 PE=1 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.043e-61 Identity = 122/183 (66.67%), Postives = 145/183 (79.23%), Query Frame = 1 Query: 151 MFGLKKSPLRVGRHNSVDPGHQVSSRSNPFDSDDELDNKQTLKPSKRTSSEPNLTTSKVSTNPFDDDDIKENTAVSS-YSLTSAARNKYRNDFRDSGGLENQSVQELEDYAVYKAEDTTKQVHGCLKIAEEIREDATKTLVSLH*QGEQITRTHYTAASIDHDLSRGEKLLGSLGGMFSRTWK 696 MFGL+KSP + +HNSVD SS+ NPFDSDDE DNK TL PSKRT+SEP+L TNPF + +++ + SS SL S ++ +Y+N+FRDSGG+ENQSVQELE YAVYKAE+TTK V GCLK+AE+IR DAT+TLV LH QGEQITRTH+ A IDHDLSRGEKLLGSLGGMFS+TWK Sbjct: 1 MFGLRKSPANLPKHNSVD---LKSSKPNPFDSDDESDNKHTLNPSKRTTSEPSLADM---TNPFGGERVQKGDSSSSKQSLFSNSKYQYKNNFRDSGGIENQSVQELEGYAVYKAEETTKSVQGCLKVAEDIRSDATRTLVMLHDQGEQITRTHHKAVEIDHDLSRGEKLLGSLGGMFSKTWK 177
BLAST of FC930147 vs. ExPASy Swiss-Prot
Match: SNP30_ARATH (Putative SNAP25 homologous protein SNAP30 OS=Arabidopsis thaliana GN=SNAP30 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.161e-34 Identity = 80/159 (50.31%), Postives = 98/159 (61.64%), Query Frame = 1 Query: 220 SSRSNPFDSDDELDNKQTLKPSKRTSSEPNLTTSKVSTNPFDDDDIKENTAVSSYSLTSAARNKYRNDFRDSGGLENQSVQELEDYAVYKAEDTTKQVHGCLKIAEEIREDATKTLVSLH*QGEQITRTHYTAASIDHDLSRGEKLLGSLGGMFSRTWK 696 S +N ++ + T+ +RTSSEP L T FDDDD KY+N F DSGGL++Q+ +ELE YAVYKAE+TTK V+ CLKIAE+IR D +TL LH QGEQI RTH A +D DLSRGEKLL +LGGMFS+ WK Sbjct: 7 SPGNNKLPNESSNNKGGTITAGRRTSSEPILITPD-----FDDDD------------------KYKNGFNDSGGLQSQTTEELEKYAVYKAEETTKGVNNCLKIAEDIRSDGARTLEMLHQQGEQINRTHEMAVDMDKDLSRGEKLLNNLGGMFSKPWK 142
BLAST of FC930147 vs. ExPASy Swiss-Prot
Match: SNP29_ARATH (SNAP25 homologous protein SNAP29 OS=Arabidopsis thaliana GN=SNAP29 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.495e-33 Identity = 77/159 (48.43%), Postives = 94/159 (59.12%), Query Frame = 1 Query: 220 SSRSNPFDSDDELDNKQTLKPSKRTSSEPNLTTSKVSTNPFDDDDIKENTAVSSYSLTSAARNKYRNDFRDSGGLENQSVQELEDYAVYKAEDTTKQVHGCLKIAEEIREDATKTLVSLH*QGEQITRTHYTAASIDHDLSRGEKLLGSLGGMFSRTWK 696 +S NPFD + E S NPFDDDD + ++ + + SGG ENQ+VQELE YAVY +E+TTK V GCLK+AEEIR DA+KTLV L+ QG+QITRTH +DH LSRGEK+LG LGG+FSRTWK Sbjct: 5 NSSWNPFDDEKE-------------------AAKSFSLNPFDDDDDDKEV-----------EKRFTSSLKPSGGKENQTVQELESYAVYNSEETTKTVQGCLKVAEEIRCDASKTLVMLNEQGDQITRTHQKTVDLDHHLSRGEKILGRLGGVFSRTWK 133 The following BLAST results are available for this feature:
BLAST of FC930147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930147 ID=FC930147; Name=FC930147; organism=Citrus clementina; type=EST; length=697bpback to top |