FC930171
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930171 vs. ExPASy Swiss-Prot
Match: DCAM_HELAN (S-adenosylmethionine decarboxylase proenzyme OS=Helianthus annuus GN=SAMDC PE=2 SV=1) HSP 1 Score: 344.354 bits (882), Expect = 3.520e-94 Identity = 172/233 (73.82%), Postives = 195/233 (83.69%), Query Frame = 3 Query: 6 TIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEAGSHVN---PVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLTCF 695 TIVSSLSN+ LDSYVLSESSLFVYPYK+IIKTCGTTKLLLSIP I V+SVRYTRGSFIF GAQ FPHRSF+EEV VLD HFGK GM S A+VMG + ++WHVYSASAE+ + V PVYTLEM MTGL ++ ASVF+K+ SSAA+MTEDSGIRKILP+S+ICDF+FDPCGYSMN+IEGDA+STIHVTPEDGFSYASFEAVGYDF+ + LT L+ERVL CF Sbjct: 50 TIVSSLSNDLLDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPHILELSGELSLTVQSVRYTRGSFIFPGAQTFPHRSFTEEVMVLDSHFGKLGMCSNAYVMGGAEKDQKWHVYSASAESANLVTQTAPVYTLEMSMTGLSKRNASVFFKSESSSAAVMTEDSGIRKILPESQICDFDFDPCGYSMNAIEGDAISTIHVTPEDGFSYASFEAVGYDFKSMGLTVLIERVLACF 282
BLAST of FC930171 vs. ExPASy Swiss-Prot
Match: DCAM_CATRO (S-adenosylmethionine decarboxylase proenzyme OS=Catharanthus roseus GN=SAMDC PE=1 SV=1) HSP 1 Score: 342.813 bits (878), Expect = 1.024e-93 Identity = 167/230 (72.61%), Postives = 189/230 (82.17%), Query Frame = 3 Query: 6 TIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLTCF 695 TIV SLSN+YLDSYVLSESSLFVYPYK+IIKTCGTTKLLLSIPAI VR+V+YTRGSFIF GAQ FPHRSFSEEV +LD +FGK G++S AF+MG+PD ++WHVYSAS + +P YTLEMCMTGLDR++ASVFYK+ SSAA+MT SGIRKILP SEICDFEFDPCGYSMNSIE A+STIHVTPEDGFSYASFEA GYD + L ++ERVL CF Sbjct: 53 TIVDSLSNQYLDSYVLSESSLFVYPYKIIIKTCGTTKLLLSIPAILKLAESLSLSVRNVKYTRGSFIFPGAQSFPHRSFSEEVELLDNYFGKLGLESNAFIMGNPDQPQKWHVYSASVGSEQSSDPTYTLEMCMTGLDREKASVFYKSESSSAALMTTRSGIRKILPDSEICDFEFDPCGYSMNSIEEAAISTIHVTPEDGFSYASFEAAGYDLKAQNLGMMIERVLACF 282
BLAST of FC930171 vs. ExPASy Swiss-Prot
Match: DCAM_SOLTU (S-adenosylmethionine decarboxylase proenzyme OS=Solanum tuberosum GN=SAMDC PE=1 SV=1) HSP 1 Score: 341.658 bits (875), Expect = 2.282e-93 Identity = 169/230 (73.48%), Postives = 192/230 (83.48%), Query Frame = 3 Query: 6 TIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLTCF 695 TIV +LSN+Y+DSYVLSESSLFVY YK+IIKTCGTTKLLL+IP I V+ VRYTRGSFIF GAQ FPHR FSEEVAVLDG+FGK S A +MGSPD T++WHVYSASA + +PVYTLEMCMTGLDR++ASVFYKT ESSAA MT SGIRKILPKSEICDFEF+PCGYSMNSIEG AVSTIH+TPEDGF+YASFE+VGY+ + ++L PL+ERVL CF Sbjct: 55 TIVDNLSNDYVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILRLAETLSLKVQDVRYTRGSFIFPGAQSFPHRHFSEEVAVLDGYFGKLAAGSKAVIMGSPDKTQKWHVYSASAGSVQSNDPVYTLEMCMTGLDREKASVFYKTEESSAAHMTVRSGIRKILPKSEICDFEFEPCGYSMNSIEGAAVSTIHITPEDGFTYASFESVGYNPKTMELGPLVERVLACF 284
BLAST of FC930171 vs. ExPASy Swiss-Prot
Match: DCAM_DATST (S-adenosylmethionine decarboxylase proenzyme OS=Datura stramonium GN=SAMDC PE=2 SV=1) HSP 1 Score: 339.732 bits (870), Expect = 8.670e-93 Identity = 168/230 (73.04%), Postives = 189/230 (82.17%), Query Frame = 3 Query: 6 TIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLTCF 695 TIV +LSN+Y+DSYVLSESSLFVY YK+IIKTCGTTKLLL+IP I V+ VRYTRGSFIF GAQ FPHR FSEEVAVLDG+FGK S A +MG+PD T++WHVYSASA +PVYTLEMCMTGLDR++ASVFYKT SSAA MT SGIRKILP SEICDFEF+PCGYSMNSIEG AVSTIH+TPEDGFSYASFE+VGYD + ++L PL+ERVL CF Sbjct: 55 TIVDNLSNDYVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILRLAETLSLKVQDVRYTRGSFIFPGAQSFPHRHFSEEVAVLDGYFGKLAAGSKAVIMGNPDKTQKWHVYSASAGPVQSNDPVYTLEMCMTGLDREKASVFYKTEGSSAAHMTVRSGIRKILPNSEICDFEFEPCGYSMNSIEGAAVSTIHITPEDGFSYASFESVGYDLKTMELGPLVERVLACF 284
BLAST of FC930171 vs. ExPASy Swiss-Prot
Match: DCAM2_ARATH (S-adenosylmethionine decarboxylase proenzyme 2 OS=Arabidopsis thaliana GN=SAMDC2 PE=2 SV=1) HSP 1 Score: 339.347 bits (869), Expect = 1.132e-92 Identity = 161/230 (70.00%), Postives = 192/230 (83.48%), Query Frame = 3 Query: 6 TIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLTCF 695 TIVSSLSN+ LDSYVLSESSLF++PYK++IKTCGTTKLLLSI + V++VRYTRGSF+ G QPFPHR+FSEEV+VLDGHF K G+ S A++MG+ D TK+WHVYSAS+ ++ N VYTLEMCMTGLD+ +ASVFYK SSA MT++SGIRKILP+S+ICDFEF+PCGYSMNSIEGDA+STIHVTPEDGFSYASFEAVGYDF + L+ L+ +VLTCF Sbjct: 51 TIVSSLSNDQLDSYVLSESSLFIFPYKIVIKTCGTTKLLLSIEPLLRLAGELSLDVKAVRYTRGSFLCPGGQPFPHRNFSEEVSVLDGHFAKLGLSSVAYLMGNDDETKKWHVYSASSANSNNKNNVYTLEMCMTGLDKDKASVFYKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSIEGDAISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCF 280
BLAST of FC930171 vs. ExPASy Swiss-Prot
Match: DCAM1_ARATH (S-adenosylmethionine decarboxylase proenzyme 1 OS=Arabidopsis thaliana GN=SAMDC1 PE=2 SV=2) HSP 1 Score: 338.961 bits (868), Expect = 1.479e-92 Identity = 165/231 (71.43%), Postives = 192/231 (83.12%), Query Frame = 3 Query: 6 TIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEAGSHV-NPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLTCF 695 TIVSSLSN+ LDSYVLSESS FVYPYKVIIKTCGTTKLLLSIP + V+SV+YTRGSF+ G QPFPHRSFSEEV+VLDGHF + G++S A++MG+ D TK+WHVY+ASA+ S+ N VYTLEMCMTGLDR++A+VFYK MT++SGIRKILPKSEICDFEF+PCGYSMNSIEGDA+STIHVTPEDGFSYASFEAVGYDF + L+ L+ RVL+CF Sbjct: 51 TIVSSLSNDQLDSYVLSESSFFVYPYKVIIKTCGTTKLLLSIPPLLKLAGELSLSVKSVKYTRGSFLCPGGQPFPHRSFSEEVSVLDGHFTQLGLNSVAYLMGNDDETKKWHVYAASAQDSSNCNNNVYTLEMCMTGLDREKAAVFYKDEADKTGSMTDNSGIRKILPKSEICDFEFEPCGYSMNSIEGDAISTIHVTPEDGFSYASFEAVGYDFNTLDLSQLVTRVLSCF 281
BLAST of FC930171 vs. ExPASy Swiss-Prot
Match: DCAM_SOLCI (S-adenosylmethionine decarboxylase proenzyme OS=Solanum chilense GN=SAMDC PE=2 SV=1) HSP 1 Score: 337.806 bits (865), Expect = 3.295e-92 Identity = 168/230 (73.04%), Postives = 188/230 (81.74%), Query Frame = 3 Query: 6 TIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLTCF 695 TIV +LSN+Y+DSYVLSESSLFVY YK+IIKTCGTTKLLL+IP I V+ VRYTRGSFIF GAQ FPHR FSEEVAVLDG+FGK S A +MG+PD T++WHVYSASA +PVYTLEMCM GLDR++ASVFYKT ESSAA MT SGIRKILPK EICDFEF+PCGYSMNSIEG AVSTIH+TPEDGFSYASFE+VGYD + +L PL+ERVL CF Sbjct: 53 TIVDNLSNDYVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILRLAETLSLKVQDVRYTRGSFIFPGAQSFPHRHFSEEVAVLDGYFGKLAAGSKAVIMGNPDKTQKWHVYSASAGTVQCNDPVYTLEMCMAGLDREKASVFYKTEESSAAHMTVRSGIRKILPKFEICDFEFEPCGYSMNSIEGAAVSTIHITPEDGFSYASFESVGYDPKTTELGPLVERVLACF 282
BLAST of FC930171 vs. ExPASy Swiss-Prot
Match: DCAM_TOBAC (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana tabacum GN=SAMDC PE=2 SV=1) HSP 1 Score: 337.421 bits (864), Expect = 4.303e-92 Identity = 169/230 (73.48%), Postives = 187/230 (81.30%), Query Frame = 3 Query: 6 TIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLTCF 695 TIV SLSN+ +DSYVLSESSLFVY YK+IIKTCGTTKLLL+IP I V+ VRYTRGSFIF GAQ FPHR FSEEVAVLDG+FGK S A +MGSPD ++WHVYSASA +PVYTLEMCMTGLDR++ASVFYKT SSAA MT SGIRKILP SEICDFEF+PCGYSMNSIEG A+STIH+TPEDGFSYASFEAVGYD + +KL PL+ERVL CF Sbjct: 55 TIVDSLSNDDVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILKLAETLSLKVQDVRYTRGSFIFPGAQSFPHRHFSEEVAVLDGYFGKLAAGSKAVIMGSPDKAQKWHVYSASAGPIQSNDPVYTLEMCMTGLDREKASVFYKTEGSSAAHMTVRSGIRKILPNSEICDFEFEPCGYSMNSIEGAALSTIHITPEDGFSYASFEAVGYDMKTMKLGPLVERVLACF 284
BLAST of FC930171 vs. ExPASy Swiss-Prot
Match: DCAM_NICSY (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana sylvestris GN=SAMDC1 PE=2 SV=1) HSP 1 Score: 337.421 bits (864), Expect = 4.303e-92 Identity = 169/230 (73.48%), Postives = 187/230 (81.30%), Query Frame = 3 Query: 6 TIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEAGSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLTCF 695 TIV SLSN+ +DSYVLSESSLFVY YK+IIKTCGTTKLLL+IP I V+ VRYTRGSFIF GAQ FPHR FSEEVAVLDG+FGK S A +MGSPD ++WHVYSASA +PVYTLEMCMTGLDR++ASVFYKT SSAA MT SGIRKILP SEICDFEF+PCGYSMNSIEG A+STIH+TPEDGFSYASFEAVGYD + +KL PL+ERVL CF Sbjct: 55 TIVDSLSNDDVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILKLAETLSLKVQDVRYTRGSFIFPGAQSFPHRHFSEEVAVLDGYFGKLAAGSKAVIMGSPDKAQKWHVYSASAGPIQSNDPVYTLEMCMTGLDREKASVFYKTEGSSAAHMTVRSGIRKILPNSEICDFEFEPCGYSMNSIEGAALSTIHITPEDGFSYASFEAVGYDMKTMKLGPLVERVLACF 284
BLAST of FC930171 vs. ExPASy Swiss-Prot
Match: DCAM2_BRAJU (S-adenosylmethionine decarboxylase proenzyme 2 OS=Brassica juncea GN=SAMDC2 PE=2 SV=1) HSP 1 Score: 337.421 bits (864), Expect = 4.303e-92 Identity = 164/234 (70.09%), Postives = 193/234 (82.48%), Query Frame = 3 Query: 6 TIVSSLSNEYLDSYVLSESSLFVYPYKVIIKTCGTTKLLLSIPAIXXXXXXXXXXVRSVRYTRGSFIFAGAQPFPHRSFSEEVAVLDGHFGKFGMDSTAFVMGSPDNTKRWHVYSASAEA----GSHVNPVYTLEMCMTGLDRKRASVFYKTNESSAAMMTEDSGIRKILPKSEICDFEFDPCGYSMNSIEGDAVSTIHVTPEDGFSYASFEAVGYDFEVVKLTPLLERVLTCF 695 TIVSSLSN+ LDSYVLSESSLF++PYK+IIKTCGTTKLL SI + V+SVRYTRGSF+ G QPFPHR+FSEEV+VLDGHF K G+ S A++MG D TK+WHVYSASA A G++ N VYTLEMCMTGLD+++ASVFYK SSA MT++SGIRKILP+S+ICDFEF+PCGYSMNS+EGDA+STIHVTPEDGFSYASFEAVGYDF + L+ L+ +VLTCF Sbjct: 51 TIVSSLSNDELDSYVLSESSLFIFPYKIIIKTCGTTKLLPSIEPLLRLAGELSLEVKSVRYTRGSFLCPGGQPFPHRNFSEEVSVLDGHFAKMGLSSVAYLMGDDDETKKWHVYSASAPARNGNGNNNNNVYTLEMCMTGLDKEKASVFYKNESSSAGSMTDNSGIRKILPQSQICDFEFEPCGYSMNSVEGDAISTIHVTPEDGFSYASFEAVGYDFTTMDLSHLVSKVLTCF 284 The following BLAST results are available for this feature:
BLAST of FC930171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930171 ID=FC930171; Name=FC930171; organism=Citrus clementina; type=EST; length=695bpback to top |