FC930175 | Citrus Genome Database

Overview


Name	FC930175
Unique Name	FC930175
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	739

Libraries


Library Name	Type
PostHarvC1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of FC930175 vs. ExPASy Swiss-Prot
Match: UBIQ_WHEAT (Ubiquitin OS=Triticum aestivum PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.247e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  300 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 527
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.673 bits (374), Expect = 3.134e-35
Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = 3

Query:   72 MQIFVKTLAGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 299
            MQIFVKTL GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 99.3673 bits (246), Expect = 2.154e-21
Identity = 51/56 (91.07%), Postives = 55/56 (98.21%), Query Frame = 3

Query:  528 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGQQLKMEGRS 695
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG+QL+ +GR+
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE-DGRT 55

HSP 4 Score: 24.2534 bits (51), Expect = 2.154e-21
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 2

Query:  677 EDGRTFADYTFRRNHS-HLV 733
            EDGRT ADY  ++  + HLV
Sbjct:   51 EDGRTLADYNIQKESTLHLV 70

[Close]

BLAST of FC930175 vs. ExPASy Swiss-Prot
Match: UBIQ_SOYBN (Ubiquitin OS=Glycine max GN=SUBI-1 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.247e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  300 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 527
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.673 bits (374), Expect = 3.134e-35
Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = 3

Query:   72 MQIFVKTLAGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 299
            MQIFVKTL GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 99.3673 bits (246), Expect = 2.154e-21
Identity = 51/56 (91.07%), Postives = 55/56 (98.21%), Query Frame = 3

Query:  528 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGQQLKMEGRS 695
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG+QL+ +GR+
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE-DGRT 55

HSP 4 Score: 24.2534 bits (51), Expect = 2.154e-21
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 2

Query:  677 EDGRTFADYTFRRNHS-HLV 733
            EDGRT ADY  ++  + HLV
Sbjct:   51 EDGRTLADYNIQKESTLHLV 70

[Close]

BLAST of FC930175 vs. ExPASy Swiss-Prot
Match: UBIQ_SOLTU (Ubiquitin OS=Solanum tuberosum GN=UBI3 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.247e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  300 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 527
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.673 bits (374), Expect = 3.134e-35
Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = 3

Query:   72 MQIFVKTLAGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 299
            MQIFVKTL GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 99.3673 bits (246), Expect = 2.154e-21
Identity = 51/56 (91.07%), Postives = 55/56 (98.21%), Query Frame = 3

Query:  528 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGQQLKMEGRS 695
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG+QL+ +GR+
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE-DGRT 55

HSP 4 Score: 24.2534 bits (51), Expect = 2.154e-21
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 2

Query:  677 EDGRTFADYTFRRNHS-HLV 733
            EDGRT ADY  ++  + HLV
Sbjct:   51 EDGRTLADYNIQKESTLHLV 70

[Close]

BLAST of FC930175 vs. ExPASy Swiss-Prot
Match: UBIQ_SOLLC (Ubiquitin OS=Solanum lycopersicum GN=UBI3 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.247e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  300 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 527
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.673 bits (374), Expect = 3.134e-35
Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = 3

Query:   72 MQIFVKTLAGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 299
            MQIFVKTL GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 99.3673 bits (246), Expect = 2.154e-21
Identity = 51/56 (91.07%), Postives = 55/56 (98.21%), Query Frame = 3

Query:  528 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGQQLKMEGRS 695
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG+QL+ +GR+
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE-DGRT 55

HSP 4 Score: 24.2534 bits (51), Expect = 2.154e-21
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 2

Query:  677 EDGRTFADYTFRRNHS-HLV 733
            EDGRT ADY  ++  + HLV
Sbjct:   51 EDGRTLADYNIQKESTLHLV 70

[Close]

BLAST of FC930175 vs. ExPASy Swiss-Prot
Match: UBIQ_PETCR (Ubiquitin OS=Petroselinum crispum GN=PCUBI4-1 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.247e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  300 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 527
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.673 bits (374), Expect = 3.134e-35
Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = 3

Query:   72 MQIFVKTLAGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 299
            MQIFVKTL GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 99.3673 bits (246), Expect = 2.154e-21
Identity = 51/56 (91.07%), Postives = 55/56 (98.21%), Query Frame = 3

Query:  528 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGQQLKMEGRS 695
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG+QL+ +GR+
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE-DGRT 55

HSP 4 Score: 24.2534 bits (51), Expect = 2.154e-21
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 2

Query:  677 EDGRTFADYTFRRNHS-HLV 733
            EDGRT ADY  ++  + HLV
Sbjct:   51 EDGRTLADYNIQKESTLHLV 70

[Close]

BLAST of FC930175 vs. ExPASy Swiss-Prot
Match: UBIQ_PEA (Ubiquitin OS=Pisum sativum GN=PU1 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.247e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  300 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 527
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.673 bits (374), Expect = 3.134e-35
Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = 3

Query:   72 MQIFVKTLAGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 299
            MQIFVKTL GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 99.3673 bits (246), Expect = 2.154e-21
Identity = 51/56 (91.07%), Postives = 55/56 (98.21%), Query Frame = 3

Query:  528 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGQQLKMEGRS 695
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG+QL+ +GR+
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE-DGRT 55

HSP 4 Score: 24.2534 bits (51), Expect = 2.154e-21
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 2

Query:  677 EDGRTFADYTFRRNHS-HLV 733
            EDGRT ADY  ++  + HLV
Sbjct:   51 EDGRTLADYNIQKESTLHLV 70

[Close]

BLAST of FC930175 vs. ExPASy Swiss-Prot
Match: UBIQ_ORYSJ (Ubiquitin OS=Oryza sativa subsp. japonica GN=UBQ1 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.247e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  300 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 527
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.673 bits (374), Expect = 3.134e-35
Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = 3

Query:   72 MQIFVKTLAGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 299
            MQIFVKTL GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 99.3673 bits (246), Expect = 2.154e-21
Identity = 51/56 (91.07%), Postives = 55/56 (98.21%), Query Frame = 3

Query:  528 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGQQLKMEGRS 695
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG+QL+ +GR+
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE-DGRT 55

HSP 4 Score: 24.2534 bits (51), Expect = 2.154e-21
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 2

Query:  677 EDGRTFADYTFRRNHS-HLV 733
            EDGRT ADY  ++  + HLV
Sbjct:   51 EDGRTLADYNIQKESTLHLV 70

[Close]

BLAST of FC930175 vs. ExPASy Swiss-Prot
Match: UBIQ_NICSY (Ubiquitin OS=Nicotiana sylvestris GN=UBICEP52-7 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.247e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  300 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 527
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.673 bits (374), Expect = 3.134e-35
Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = 3

Query:   72 MQIFVKTLAGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 299
            MQIFVKTL GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 99.3673 bits (246), Expect = 2.154e-21
Identity = 51/56 (91.07%), Postives = 55/56 (98.21%), Query Frame = 3

Query:  528 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGQQLKMEGRS 695
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG+QL+ +GR+
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE-DGRT 55

HSP 4 Score: 24.2534 bits (51), Expect = 2.154e-21
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 2

Query:  677 EDGRTFADYTFRRNHS-HLV 733
            EDGRT ADY  ++  + HLV
Sbjct:   51 EDGRTLADYNIQKESTLHLV 70

[Close]

BLAST of FC930175 vs. ExPASy Swiss-Prot
Match: UBIQ_MAIZE (Ubiquitin OS=Zea mays GN=UBF9 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.247e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  300 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 527
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.673 bits (374), Expect = 3.134e-35
Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = 3

Query:   72 MQIFVKTLAGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 299
            MQIFVKTL GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 99.3673 bits (246), Expect = 2.154e-21
Identity = 51/56 (91.07%), Postives = 55/56 (98.21%), Query Frame = 3

Query:  528 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGQQLKMEGRS 695
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG+QL+ +GR+
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE-DGRT 55

HSP 4 Score: 24.2534 bits (51), Expect = 2.154e-21
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 2

Query:  677 EDGRTFADYTFRRNHS-HLV 733
            EDGRT ADY  ++  + HLV
Sbjct:   51 EDGRTLADYNIQKESTLHLV 70

[Close]

BLAST of FC930175 vs. ExPASy Swiss-Prot
Match: UBIQ_LUPPO (Ubiquitin OS=Lupinus polyphyllus PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.247e-36
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  300 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 527
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 148.673 bits (374), Expect = 3.134e-35
Identity = 75/76 (98.68%), Postives = 75/76 (98.68%), Query Frame = 3

Query:   72 MQIFVKTLAGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 299
            MQIFVKTL GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 99.3673 bits (246), Expect = 2.154e-21
Identity = 51/56 (91.07%), Postives = 55/56 (98.21%), Query Frame = 3

Query:  528 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGQQLKMEGRS 695
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAG+QL+ +GR+
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE-DGRT 55

HSP 4 Score: 24.2534 bits (51), Expect = 2.154e-21
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 2

Query:  677 EDGRTFADYTFRRNHS-HLV 733
            EDGRT ADY  ++  + HLV
Sbjct:   51 EDGRTLADYNIQKESTLHLV 70

The following BLAST results are available for this feature:

BLAST of FC930175 vs. ExPASy Swiss-Prot

BLAST of FC930175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
UBIQ_WHEAT	8.247e-36	100.00	Ubiquitin OS=Triticum aestivum PE=3 SV=1	[more]
UBIQ_SOYBN	8.247e-36	100.00	Ubiquitin OS=Glycine max GN=SUBI-1 PE=3 SV=1	[more]
UBIQ_SOLTU	8.247e-36	100.00	Ubiquitin OS=Solanum tuberosum GN=UBI3 PE=3 SV=1	[more]
UBIQ_SOLLC	8.247e-36	100.00	Ubiquitin OS=Solanum lycopersicum GN=UBI3 PE=3 SV=...	[more]
UBIQ_PETCR	8.247e-36	100.00	Ubiquitin OS=Petroselinum crispum GN=PCUBI4-1 PE=3...	[more]
UBIQ_PEA	8.247e-36	100.00	Ubiquitin OS=Pisum sativum GN=PU1 PE=3 SV=1	[more]
UBIQ_ORYSJ	8.247e-36	100.00	Ubiquitin OS=Oryza sativa subsp. japonica GN=UBQ1 ...	[more]
UBIQ_NICSY	8.247e-36	100.00	Ubiquitin OS=Nicotiana sylvestris GN=UBICEP52-7 PE...	[more]
UBIQ_MAIZE	8.247e-36	100.00	Ubiquitin OS=Zea mays GN=UBF9 PE=3 SV=1	[more]
UBIQ_LUPPO	8.247e-36	100.00	Ubiquitin OS=Lupinus polyphyllus PE=3 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	C34004E12EF PostHarvC1 Citrus clementina cDNA clone C34004E12, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC930175 ID=FC930175; Name=FC930175; organism=Citrus clementina; type=EST; length=739bp
CTGGCCGGGGATCGGGTTATTCGATATTCTCACAAATCTCTCCAATTCTC
TCGCTAAGAAACTTTTAAAAGATGCAGATCTTCGTGAAAACCCTAGCCGG
CAAGACCATTACTCTCGAAGTCGAGAGCTCCGACACCATCGACAACGTCA
AGGCCAAGATCCAAGACAAGGAAGGAATCCCTCCGGACCAGCAGCGTCTG
ATCTTCGCCGGAAAACAGCTCGAAGACGGCCGCACCTTGGCCGATTACAA
TATCCAAAAGGAATCGACGCTTCATCTGGTGCTTCGTCTCCGTGGAGGCA
TGCAGATCTTCGTGAAAACCCTAACCGGCAAGACCATTACTCTCGAAGTT
GAGAGCTCCGACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGA
AGGGATTCCGCCGGACCAGCAGAGGCTGATCTTCGCCGGAAAGCAACTCG
AGGACGGCCGCACCTTGGCCGATTACAATATCCAGAAGGAATCAACTCTT
CACCTCGTGCTTCGTCTCCGTGGGGGCATGCAGATATTCGTCAAAACCCT
AACGGGAAAGACGATTACCCTCGAAGTCGAGAGCTCCGACACGATCGACA
ACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATTCCGCCGGACCAGCAG
CGTTTGATCTTCGCTGGNCAGCAGCTGAAGATGGAAGGACGTTCGCGGAT
TACACATTCAGAAGGAATCACTCTCATCTGGTTTGCGTC