FC930237
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 3.978e-54 Identity = 71/128 (55.47%), Postives = 83/128 (64.84%), Query Frame = 2 Query: 95 GSAGNCG---SGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGE-----CDPDDGTAGDG--GELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 448 GSA CG +CPGG CCS +GWCG T DYC GCQS C+ G+ CD D GDG G L II + F+ LL++RND RCPA FYTY+AFI AAK FP FGN+G++ MRKREIAAF Sbjct: 20 GSAEQCGRQAGDALCPGGLCCSSYGWCGTTVDYCGIGCQSQCDGGGGGDGGDDGCDGGDDGGGDGDDGYLSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAF 147 HSP 2 Score: 92.8189 bits (229), Expect = 3.978e-54 Identity = 46/75 (61.33%), Postives = 51/75 (68.00%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDP--NYPC-RGKYY-GRGPIQLSWNYITYG 641 K ++ F QT HETTGGWPDAP G YAWGYC+ +E+ YCDP NY C GK Y GRGPIQLSWNY YG Sbjct: 141 KREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEINC--QPYCDPSSNYQCVAGKQYCGRGPIQLSWNY-NYG 212
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.547e-53 Identity = 66/121 (54.55%), Postives = 80/121 (66.12%), Query Frame = 2 Query: 95 GSAGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 448 GSA CG G VCPGG CCS+FGWCG T DYC GCQS C+ G++G++I+R MF D+L++RN+ CP + FYTYDAFI AAKAFP FG +G+ T RKREIAAF Sbjct: 18 GSAEQCGGQAGGRVCPGGACCSKFGWCGNTADYCGSGCQSQCSST---------------GDIGQLITRSMFNDMLKHRNEGSCPGKGFYTYDAFIAAAKAFPGFGTTGDTTTRKREIAAF 123 HSP 2 Score: 89.7373 bits (221), Expect = 2.547e-53 Identity = 45/81 (55.56%), Postives = 54/81 (66.67%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLSWNYITYGAEKA*G 659 K ++ F AQT HETTGGW AP G YAWGYC+ RE G+ + YC P+ +PC KYYGRGPIQ+S+NY A KA G Sbjct: 117 KREIAAFLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGA-YCVPSAQWPCAAGRKYYGRGPIQISYNYNYGQAGKAIG 196
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 127.872 bits (320), Expect = 3.918e-51 Identity = 63/122 (51.64%), Postives = 77/122 (63.11%), Query Frame = 2 Query: 98 SAGNCG---SGVVCPGGECCSRFGWCGLTTDYCCE-GCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 451 SA CG G +CP G CCS FGWCG T YC + GCQS +C P G G+L IIS F+D+L++RND CPAR FYTY+AFI AAK+FP FG +G+ RK+E+AAFF Sbjct: 32 SAEQCGRQAGGALCPNGLCCSEFGWCGNTEPYCKQPGCQS--------QCTPGGTPPGPTGDLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFF 145 HSP 2 Score: 95.1301 bits (235), Expect = 3.918e-51 Identity = 44/75 (58.67%), Postives = 54/75 (72.00%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLSWNYITYG 641 K+++ FF QT HETTGGW AP G Y+WGYCF +E A SDYC+P+ +PC +YYGRGP+QLSWNY YG Sbjct: 138 KKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPA-SDYCEPSATWPCASGKRYYGRGPMQLSWNY-NYG 210
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.109e-51 Identity = 62/115 (53.91%), Postives = 76/115 (66.09%), Query Frame = 2 Query: 104 GNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 448 G G +CPGG CCS+FGWCG TTDYC GCQS C G + +L +ISR F+ +L++RND CPA+ FYTYDAFI AAKA+P+FGN+G+ RKREIAAF Sbjct: 31 GRQAGGALCPGGNCCSQFGWCGSTTDYCGPGCQSQCG-----------GPSPAPTDLSALISRSTFDQMLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAF 134 HSP 2 Score: 88.1965 bits (217), Expect = 5.109e-51 Identity = 40/73 (54.79%), Postives = 47/73 (64.38%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCR--GKYYGRGPIQLSWNYITYG 641 K ++ F QT HETTGGW AP G YAWGYCF RE ++ P +PC +YYGRGPIQ+SWNY YG Sbjct: 128 KREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPSTYCSATPQFPCAPGQQYYGRGPIQISWNY-NYG 199
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.110e-51 Identity = 66/123 (53.66%), Postives = 82/123 (66.67%), Query Frame = 2 Query: 95 GSAGNCG---SGVVCPGGECCSRFGWCGLTTDYCCE--GCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 448 GSA CG G +CPGG CCS+FGWCG T DYC + GCQS C+ G+ GD G L +I+R+ F+ +L +RND CPAR FYTYDAFI AAK+FPAF +G++ RKRE+AAF Sbjct: 19 GSAEQCGRQAGGALCPGGLCCSQFGWCGNTDDYCKKENGCQSQCS-----------GSGGDTGGLDSLITRERFDQMLLHRNDGGCPARGFYTYDAFIAAAKSFPAFATTGDDATRKREVAAF 130 HSP 2 Score: 88.1965 bits (217), Expect = 5.110e-51 Identity = 47/77 (61.04%), Postives = 54/77 (70.13%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGG--WPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR-GK-YYGRGPIQLSWNYITYG 641 K ++ F AQT HETTGG W AP G Y WGYC+NRE+ A DYC DPNYPC GK Y+GRGP+QL+WNY YG Sbjct: 124 KREVAAFLAQTSHETTGGAGWA-APDGPYTWGYCYNRELNPA--DYCQWDPNYPCAPGKQYFGRGPMQLTWNY-NYG 196
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 8.680e-51 Identity = 67/122 (54.92%), Postives = 79/122 (64.75%), Query Frame = 2 Query: 98 SAGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 451 SA CGS G CP G CCS+FGWCG T DYC G CQS C G P T GG+LG IIS MF+ +L++RND C + FY+Y+AFI AA++FP FG SG+ T RKREIAAFF Sbjct: 22 SAEQCGSQAGGARCPSGLCCSKFGWCGNTNDYCGPGNCQSQCP----GGPTPTPPTPPGGGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFF 139 HSP 2 Score: 88.9669 bits (219), Expect = 8.680e-51 Identity = 44/75 (58.67%), Postives = 52/75 (69.33%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLSWNYITYG 641 K ++ FFAQT HETTGGW AP G YAWGYC+ RE G + DYC P+ +PC KY+GRGPIQ+S NY YG Sbjct: 132 KREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQG-SPGDYCTPSGQWPCAPGRKYFGRGPIQISHNY-NYG 204
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.475e-50 Identity = 66/122 (54.10%), Postives = 78/122 (63.93%), Query Frame = 2 Query: 95 GSAGNCG---SGVVCPGGECCSRFGWCGLTTDYCC-EGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 448 GSA CG G +CPGG CCS+FGWCG T DYC GCQS C+ G A G L +ISR+ F +L +RND CPAR FYTYDAFI AA++FPAF +G++ RKREIAAF Sbjct: 20 GSAEQCGRQAGGALCPGGLCCSQFGWCGSTADYCTVPGCQSQCS---------GSGPAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAF 132 HSP 2 Score: 90.5077 bits (223), Expect = 1.475e-50 Identity = 49/77 (63.64%), Postives = 55/77 (71.43%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGG--WPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR-GK-YYGRGPIQLSWNYITYG 641 K ++ F AQT HETTGG W AP G YAWGYC+NRE+ SS YC DPNYPC GK Y+GRGP+QLSWNY YG Sbjct: 126 KREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSS-YCASDPNYPCAPGKQYFGRGPMQLSWNY-NYG 199
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.923e-50 Identity = 64/117 (54.70%), Postives = 75/117 (64.10%), Query Frame = 2 Query: 104 GNCGSGVVCPGGECCSRFGWCGLTTDYCCE-GCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 451 G G +CP G CCS FGWCG T YC + GCQS C G P G G+L IISR F+D+L++RND CPAR FYTYDAFI AAK+FP FG +G+ RK+EIAAFF Sbjct: 24 GRQAGGALCPNGLCCSEFGWCGDTEAYCKQPGCQSQC-----GGTPP-----GPTGDLSGIISRSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFF 130 HSP 2 Score: 92.0485 bits (227), Expect = 1.923e-50 Identity = 43/75 (57.33%), Postives = 52/75 (69.33%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLSWNYITYG 641 K+++ FF QT HETTGGW AP G Y+WGYCF +E SS+YC P+ +PC YYGRGP+QLSWNY YG Sbjct: 123 KKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQN-PSSNYCSPSAEWPCASGKSYYGRGPMQLSWNY-NYG 195
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.506e-50 Identity = 61/115 (53.04%), Postives = 76/115 (66.09%), Query Frame = 2 Query: 104 GNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 448 G G +CPGG CCS+FGWCG TTDYC + CQS C G + +L +ISR F+ +L++RND CPA+ FYTYDAFI AAKA+P+FGN+G+ RKREIAAF Sbjct: 30 GRQAGGALCPGGNCCSQFGWCGSTTDYCGKDCQSQCG-----------GPSPAPTDLSALISRSTFDQVLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAF 133 HSP 2 Score: 88.1965 bits (217), Expect = 2.506e-50 Identity = 40/73 (54.79%), Postives = 47/73 (64.38%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCR--GKYYGRGPIQLSWNYITYG 641 K ++ F QT HETTGGW AP G YAWGYCF RE ++ P +PC +YYGRGPIQ+SWNY YG Sbjct: 127 KREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPSAYCSATPQFPCAPGQQYYGRGPIQISWNY-NYG 198
BLAST of FC930237 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 1.229e-49 Identity = 61/120 (50.83%), Postives = 79/120 (65.83%), Query Frame = 2 Query: 98 SAGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 448 SA CG+ G +CPGG CCS+FGWCG T++YC +GCQS C+ G++G GG L +IS F ++L++RND C + FYTYDAF+ AAKAFP F N G+ +KREIAAF Sbjct: 19 SAEQCGTQAGGALCPGGLCCSKFGWCGSTSEYCGDGCQSQCS-----------GSSG-GGTLSSLISGDTFNNMLKHRNDNACQGKPFYTYDAFLSAAKAFPNFANKGDTATKKREIAAF 126 HSP 2 Score: 90.1225 bits (222), Expect = 1.229e-49 Identity = 40/73 (54.79%), Postives = 47/73 (64.38%), Query Frame = 3 Query: 429 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCRG--KYYGRGPIQLSWNYITYG 641 K ++ F QT HETTGGWP AP G YAWGYCF RE ++ +PC +YYGRGPIQ+SWNY YG Sbjct: 120 KREIAAFLGQTSHETTGGWPTAPDGPYAWGYCFLREQNPSTYCQASSEFPCASGKQYYGRGPIQISWNY-NYG 191 The following BLAST results are available for this feature:
BLAST of FC930237 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930237 ID=FC930237; Name=FC930237; organism=Citrus clementina; type=EST; length=730bpback to top |