FC930238
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930238 vs. ExPASy Swiss-Prot
Match: SKI27_ARATH (F-box protein SKIP27 OS=Arabidopsis thaliana GN=SKIP27 PE=1 SV=2) HSP 1 Score: 112.849 bits (281), Expect = 1.438e-24 Identity = 64/123 (52.03%), Postives = 80/123 (65.04%), Query Frame = 2 Query: 296 VRYTRGLGRKRILIANG----------EETXXXXXXXXXXXLKRQCSE-KMIDFNCDEKSRLEALPQDILIRILCGVNHEDLKQLFHVSRPIREATLIAKQWHFAYNTPRKTRVFKTSIDYED 631 VR+TRGLGRKRILI++ E LKRQ S ++ + EKSRLE LPQD+LIR++CGV+HEDLK L VS+ IREA+L+AK HFAY TP+KTR F+ SID E+ Sbjct: 63 VRFTRGLGRKRILISSCVRESLSRSAVEIPVVSESPPVKSSLKRQRSRITIVSSSSSEKSRLECLPQDLLIRVICGVDHEDLKSLKLVSKSIREASLVAKTLHFAYTTPKKTRAFRNSIDLEE 185
BLAST of FC930238 vs. ExPASy Swiss-Prot
Match: FB220_ARATH (F-box protein At4g05010 OS=Arabidopsis thaliana GN=At4g05010 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.907e-15 Identity = 51/109 (46.79%), Postives = 66/109 (60.55%), Query Frame = 2 Query: 293 FVRYTRGLGRKRILIANGEETXXXXXXXXXXXLKRQCSEKMIDFNCDEKSRLEALPQDILIRILCGVNHEDLKQLFHVSRPIREATLIAKQWHFAYNTPRKTRVFKTSI 619 FVR+TRGLGRKRILI+ +KR E +C +S LE L QDILIR+LC V+HEDL L VS+ IR+A + AK+ HF Y+TP+K F+ +I Sbjct: 23 FVRFTRGLGRKRILISK------RAPENDSPPVKRPSHETTE--SC--RSLLETLHQDILIRVLCHVDHEDLATLKRVSKTIRKAVIEAKKSHFDYSTPKKRLPFRDAI 121
BLAST of FC930238 vs. ExPASy Swiss-Prot
Match: FB248_ARATH (F-box protein At4g35930 OS=Arabidopsis thaliana GN=At4g35930 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.673e-12 Identity = 29/58 (50.00%), Postives = 47/58 (81.03%), Query Frame = 2 Query: 428 CDEKSRLEALPQDILIRILCGVNHEDLKQLFHVSRPIREATLIAKQWHFAYNTPRKTR 601 C +S+LE+LP D+L++I+C ++H+ LK +FHVS+ IR AT++A+Q+HF Y TP ++R Sbjct: 156 CVSESQLESLPMDLLVKIVCHLHHDQLKAVFHVSQRIRMATILARQYHFNYTTPDRSR 213 The following BLAST results are available for this feature:
BLAST of FC930238 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930238 ID=FC930238; Name=FC930238; organism=Citrus clementina; type=EST; length=633bpback to top |