FC930303
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930303 vs. ExPASy Swiss-Prot
Match: ATX3H_ARATH (Ataxin-3 homolog OS=Arabidopsis thaliana GN=At3g54130 PE=2 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 6.912e-69 Identity = 127/146 (86.99%), Postives = 131/146 (89.73%), Query Frame = 3 Query: 273 MEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGR-VPAASSGDFLTEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAA 707 ME SNGGMLYHEVQES LCAVHCVNTVLQGPFFSEFDLAA+A+DLD ERQVMLEG V + GDFL EESHNVSL GDFSIQVLQKALEVWDLQVIPLNCP AEPAQIDPELE+AFICHLHDHWFCIRKVNGEWYNFDSL AA Sbjct: 1 MERTSNGGMLYHEVQESNLCAVHCVNTVLQGPFFSEFDLAAVAADLDGKERQVMLEGAAVGGFAPGDFLAEESHNVSLGGDFSIQVLQKALEVWDLQVIPLNCPDAEPAQIDPELESAFICHLHDHWFCIRKVNGEWYNFDSLLAA 146
BLAST of FC930303 vs. ExPASy Swiss-Prot
Match: ATX3_ORYSJ (Putative ataxin-3 homolog OS=Oryza sativa subsp. japonica GN=Os01g0851400 PE=3 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.887e-58 Identity = 113/146 (77.40%), Postives = 120/146 (82.19%), Query Frame = 3 Query: 282 ASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGRVPAASS--GDFLTEE--SHNVSLDGDFSIQVLQKALEVWDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAA 707 ASNGG+LYHEVQE KLCAVHCVNT LQGPFFSEFDL+ALA DLD+ ERQVM EG AA++ GDFL E SHNVSL GDFSIQVLQKALEVWDLQVIPL+ P DPELE AFICHL DHWFCIRKVNGEWYNF+SLY A Sbjct: 7 ASNGGLLYHEVQEGKLCAVHCVNTTLQGPFFSEFDLSALAVDLDQRERQVMSEGAAGAATTAAGDFLAEGEGSHNVSLGGDFSIQVLQKALEVWDLQVIPLDSPDVGSCLFDPELETAFICHLQDHWFCIRKVNGEWYNFNSLYPA 152
BLAST of FC930303 vs. ExPASy Swiss-Prot
Match: ATX3_HUMAN (Ataxin-3 OS=Homo sapiens GN=ATXN3 PE=1 SV=3) HSP 1 Score: 126.716 bits (317), Expect = 1.193e-28 Identity = 59/133 (44.36%), Postives = 85/133 (63.91%), Query Frame = 3 Query: 300 LYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGRVPAASSGDFLTEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSL 698 ++HE QE LCA HC+N +LQG +FS +L+++A LD ER M EG V + FL + S N+ G FSIQV+ AL+VW L++I N P + +IDP E +FIC+ +HWF +RK+ +W+N +SL Sbjct: 4 IFHEKQEGSLCAQHCLNNLLQGEYFSPVELSSIAHQLDEEERMRMAEGGVTSEDYRTFLQQPSGNMDDSGFFSIQVISNALKVWGLELILFNSPEYQRLRIDPINERSFICNYKEHWFTVRKLGKQWFNLNSL 136
BLAST of FC930303 vs. ExPASy Swiss-Prot
Match: ATX3_RAT (Ataxin-3 OS=Rattus norvegicus GN=Atxn3 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.034e-28 Identity = 59/133 (44.36%), Postives = 85/133 (63.91%), Query Frame = 3 Query: 300 LYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGRVPAASSGDFLTEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSL 698 ++HE QE LCA HC+N +LQG +FS +L+++A LD ER M EG V + FL + S N+ G FSIQV+ AL+VW L++I N P + +IDP E +FIC+ +HWF +RK+ +W+N +SL Sbjct: 4 IFHEKQEGSLCAQHCLNNLLQGEYFSPVELSSIAHQLDEEERLRMAEGGVTSEDYRTFLQQPSGNMDDSGFFSIQVISNALKVWGLELILFNSPEYQRLRIDPINERSFICNYKEHWFTVRKLGKQWFNLNSL 136
BLAST of FC930303 vs. ExPASy Swiss-Prot
Match: ATX3_MOUSE (Ataxin-3 OS=Mus musculus GN=Atxn3 PE=1 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 2.034e-28 Identity = 59/133 (44.36%), Postives = 85/133 (63.91%), Query Frame = 3 Query: 300 LYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGRVPAASSGDFLTEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSL 698 ++HE QE LCA HC+N +LQG +FS +L+++A LD ER M EG V + FL + S N+ G FSIQV+ AL+VW L++I N P + +IDP E +FIC+ +HWF +RK+ +W+N +SL Sbjct: 4 IFHEKQEGSLCAQHCLNNLLQGEYFSPVELSSIAHQLDEEERLRMAEGGVTSEDYRTFLQQPSGNMDDSGFFSIQVISNALKVWGLELILFNSPEYQRLRIDPINERSFICNYKEHWFTVRKLGKQWFNLNSL 136
BLAST of FC930303 vs. ExPASy Swiss-Prot
Match: ATX3_CHICK (Ataxin-3 OS=Gallus gallus GN=ATXN3 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.470e-28 Identity = 59/133 (44.36%), Postives = 84/133 (63.16%), Query Frame = 3 Query: 300 LYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGRVPAASSGDFLTEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSL 698 ++HE QE LCA HC+N +LQG +FS +L+++A LD ER M EG V + FL + S N+ G FSIQV+ AL+VW L++I N P + IDP E +FIC+ +HWF +RK+ +W+N +SL Sbjct: 4 IFHERQEGSLCAQHCLNNLLQGEYFSPVELSSIAQQLDEEERMRMAEGGVSSEEYRTFLQQPSVNMDDSGFFSIQVISNALKVWGLELILFNSPEYQRLGIDPINEKSFICNYKEHWFTVRKLGKQWFNLNSL 136
BLAST of FC930303 vs. ExPASy Swiss-Prot
Match: ATX3L_HUMAN (Putative ataxin-3-like protein OS=Homo sapiens GN=ATXN3L PE=5 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 1.722e-27 Identity = 61/135 (45.19%), Postives = 81/135 (60.00%), Query Frame = 3 Query: 300 LYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGRVPAASSGDFLTEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYA 704 ++HE QE LCA HC+N +LQG +FS +LA++A LD ER M EG V + FL + S N+ G FSIQV+ AL+ W L++I N P + IDP E +FIC+ HWF IRK W+N +SL A Sbjct: 4 IFHEKQEGFLCAQHCLNNLLQGEYFSPVELASIAHQLDEEERMRMAEGGVTSEEYLAFLQQPSENMDDTGFFSIQVISNALKFWGLEIIHFNNPEYQKLGIDPINERSFICNYKQHWFTIRKFGKHWFNLNSLLA 138
BLAST of FC930303 vs. ExPASy Swiss-Prot
Match: ATX3_CAEEL (Ataxin-3 homolog OS=Caenorhabditis elegans GN=atx-3 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.047e-16 Identity = 44/133 (33.08%), Postives = 74/133 (55.64%), Query Frame = 3 Query: 300 LYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGRVPAASSGDFLTEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSL 698 ++ E QE+ LCA H +N +LQ + DL LA +D+ E+Q++ + + S N++ G FSIQVL+KALE + L++ + P + +P A+IC+L +HWF +RK +W+ +S+ Sbjct: 10 IFFEHQEAALCAQHALNMLLQDALYKWQDLRDLAIQMDKMEQQIL--------GNANPTPGRSENMNESGYFSIQVLEKALETFSLKLTNIENPAMVDYKNNPLTARAYICNLREHWFVLRKFGNQWFELNSV 134
BLAST of FC930303 vs. ExPASy Swiss-Prot
Match: ATX3_CAEBR (Ataxin-3 homolog OS=Caenorhabditis briggsae GN=atx-3 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.400e-15 Identity = 41/133 (30.83%), Postives = 73/133 (54.89%), Query Frame = 3 Query: 300 LYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGRVPAASSGDFLTEESHNVSLDGDFSIQVLQKALEVWDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSL 698 ++ E Q++ LCA H +N +LQ F+ +L LA +D+ E ++ + S N++ G FSIQV++KALE +DL++I + P + +P A++ +L +HWF +RK +W+ +S+ Sbjct: 11 IFFERQQAALCAQHALNMLLQDSLFTYENLRDLARQMDQMEHDIL--------GNNANAVGRSENMNDSGFFSIQVIEKALETFDLKLINMENPAMAEFKANPLTARAYVLNLREHWFVLRKFGNQWFELNSV 135 The following BLAST results are available for this feature:
BLAST of FC930303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930303 ID=FC930303; Name=FC930303; organism=Citrus clementina; type=EST; length=707bpback to top |