FC930313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930313 vs. ExPASy Swiss-Prot
Match: FBX6_ARATH (F-box only protein 6 OS=Arabidopsis thaliana GN=FBX6 PE=2 SV=1) HSP 1 Score: 380.563 bits (976), Expect = 4.676e-105 Identity = 172/235 (73.19%), Postives = 206/235 (87.66%), Query Frame = 3 Query: 3 FPEDLYEAVIARLPIATFFRFRSVCQKWNSLLKSHSFSQHCAQVPQGIPWFYTITHENVNSGAMYDPSLKKWHHPTISSLPTKMIILPVASAGGLVCFLDIGHRNFYVCNPLTQSFKELPARSVKVWSRVAVGMTLNGNSTSSGYKILWVGCDGEYEIYDSLRNSWTRPGSMPSNIKLPLSLNFRSQAVSVDGILYFMRSDPEGIVSYNMVTGVWKQFIIPAPLHLNDHTLAECG 707 FP+DL+E V++RLP+ATFF+FR+VC+KWN+L+ S SFS+ ++PQ IPWFYTITHENVNSG +YDPSLKKWHHP I +LP K I+LP+ASAGGLVCFLDIGHRNFYV NPLT+SF+ELPARS KVWSRVAVGMTLNGNSTS GYK+LWVGC+GEYE+YDSL N WT+ G++PSNIKLP+ LNF+SQ V++ LYFM +DPEGI+SY+MV+G WKQFIIP P L+DHTLA CG Sbjct: 120 FPQDLFEDVVSRLPMATFFQFRAVCRKWNALIDSDSFSRCFTELPQTIPWFYTITHENVNSGQVYDPSLKKWHHPIIPALPKKSIVLPMASAGGLVCFLDIGHRNFYVSNPLTKSFRELPARSFKVWSRVAVGMTLNGNSTSHGYKVLWVGCEGEYEVYDSLSNVWTKRGTIPSNIKLPVLLNFKSQPVAIHSTLYFMLTDPEGILSYDMVSGKWKQFIIPGPPDLSDHTLAACG 354
BLAST of FC930313 vs. ExPASy Swiss-Prot
Match: FBX13_ARATH (F-box only protein 13 OS=Arabidopsis thaliana GN=FBX13 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.322e-18 Identity = 64/215 (29.77%), Postives = 110/215 (51.16%), Query Frame = 3 Query: 9 EDLYEAVIARLPIATFFRFRSVCQKWNSLLKSHSFSQHCAQVPQGIPWFYTITHENVNSGAMYDPSLKKWHHPTISSL--PTKMIILPVASAGGLVCFLDIGHRNFYVCNPLTQSFKELPARSVKVWSRV-AVGMTLNGNSTSSGYKILWVGCDGE-----YEIYDSLRNSWTRPGSMPSNIKLPLSLNFRSQAVSVDGILYFMRSDPEGIVSYN 629 +D+ E V++ LP + FFR SVC++W S S SF C+Q+P PWF+ I +++ +S ++D + W + + +PVAS+GGL+C+ +F + NPLT S +++P++ + AV MT T S Y ++ + GE ++IY+S +SW++ + S SL+ S G +YF+ +V+ N Sbjct: 133 DDVLERVLSWLPTSCFFRMSSVCKRWKSSQTSKSFKLACSQIPTRDPWFFMIDNDSNSSSFVFDSTENSWKNLNRRDFLHHHRQDFIPVASSGGLLCYRCSISGDFLLRNPLTGSSRDIPSQDNNNNKPLQAVAMTTT-TVTPSSYTLVTI--SGEIPNLSFKIYESNADSWSKDQELESVKNNDSSLHDDYDTDS--GTVYFLSKQGNVVVASN 342
BLAST of FC930313 vs. ExPASy Swiss-Prot
Match: FK111_ARATH (F-box/kelch-repeat protein At5g15710 OS=Arabidopsis thaliana GN=At5g15710 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.649e-17 Identity = 72/239 (30.13%), Postives = 107/239 (44.77%), Query Frame = 3 Query: 6 PEDLYEAVIARLPIATFFRFRSVCQKWNSLLKSHSFSQHCAQVPQGIPWFYTI--THENVNSGAMYDPSLKKWHHPTISSLPTKMIILPVASAGGLVCFLDIGHRNF--YVCNPLTQSFKELPA-------RSVKVWSRVAVGMTLNGNSTSSGYKILWVGCDGEYEIYDSLRNSWTRPGSMPSNIKLPLSLNFRSQAVS-VDGILYFMRSDPEGIVSYNMVTGVWKQFIIPAPLHLND 686 PEDL ++AR+P FR RSVC+KWN +L+ +SF + + V P T + +++ LK W+ + LP L V S+GGLVCF + F VCNPL QS++ LP+ + + V R + S G K L E+YDS + W+ MP ++N S ++ D LY P G++ Y + +G W+ P L D Sbjct: 108 PEDLLNEILARVPPFMIFRIRSVCKKWNLILQDNSFLKFHSNVSSHGPCLLTFWKNSPQIPQCSVFSLPLKTWYKIPFTFLPPWAFWL-VGSSGGLVCFSGLDGLTFRTLVCNPLMQSWRTLPSMHYNQQRQLIMVVDRSDKSFKVIATSDIYGDKSL------PTEVYDSKTDKWSLHQIMP-------AVNLCSSKMAYCDSRLYLETLSPLGLMMYRLDSGQWEHIPAKFPRSLLD 332
BLAST of FC930313 vs. ExPASy Swiss-Prot
Match: FBK77_ARATH (F-box/kelch-repeat protein At3g61590 OS=Arabidopsis thaliana GN=At3g61590 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.489e-15 Identity = 46/121 (38.02%), Postives = 72/121 (59.50%), Query Frame = 3 Query: 6 PEDLYEAVIARLPIATFFRFRSVCQKWNSLLKSHSFSQHCA--QVPQGIPWFYTITHENVNSGAMYDPSLKKWHHPTISSLPTKMIILPVASAGGLVCFLDIGHRN-FYVCNPLTQSFKEL 359 P+DL E +++ LPIA+ FR +VC++WN ++ S F + + V Q PW++ T + SG YDP ++KW+ + + T VAS+ GLVCF+D RN YV NP+T+ ++ L Sbjct: 44 PDDLLERILSFLPIASIFRAGTVCKRWNEIVSSRRFLCNFSNNSVSQR-PWYFMFTTTDDPSGYAYDPIIRKWYSFDLPCIETSNWF--VASSCGLVCFMDNDCRNKIYVSNPITKQWRTL 161
BLAST of FC930313 vs. ExPASy Swiss-Prot
Match: UFO_ARATH (Protein UNUSUAL FLORAL ORGANS OS=Arabidopsis thaliana GN=UFO PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 4.646e-12 Identity = 65/263 (24.71%), Postives = 112/263 (42.59%), Query Frame = 3 Query: 6 PEDLYEAVIARLPIATFFRFRSVCQKWNSLLKSHSFSQHCAQ-VPQGIPWFYTITHENVNS-----------------GAMYDPSLKKWHHPTISSLPTKMIILPVASAGGLVCFL--DIGHRNFYVCNPLTQSFKELPARS-VKVWSRV-------AVGMTLNGNSTSSGYKILWVGCDGEYEIYDSLRNSWTRPGSMPSNIKLPLSLNFRSQAVSVDGILYFMRSDPEGIVSYNMVTGVWKQFIIPAPLHLNDHTLAECGG 710 P L + VIA LP FFR R VC+++ SLL S++F + Q +P F H+ + S G ++DP+ +W+ + + +P+ P S+GGLV ++ + G + +CNPL S +LP S +++ + ++ +T+ G+ S Y + + + + + W S+P L + V V G Y M P ++SY + W + P L +L E G Sbjct: 51 PPPLLDRVIAFLPPPAFFRTRCVCKRFYSLLFSNTFLETYLQLLPLRHNCFLFFKHKTLKSYIYKRGGTNDDDSNKAEGFLFDPNEIRWYRLSFAYIPSG--FYPSGSSGGLVSWVSEEAGLKTILLCNPLVGSVSQLPPISRPRLFPSIGLSVTPTSIDVTVAGDDLISPYAVKNLSSESFHVDAGGFFSLWAMTSSLPRLCSLE-----SGKMVYVQGKFYCMNYSPFSVLSYEVTGNRWIKIQAPMRRFLRSPSLLESKG 306
BLAST of FC930313 vs. ExPASy Swiss-Prot
Match: FK119_ARATH (F-box/kelch-repeat protein At5g43190 OS=Arabidopsis thaliana GN=At5g43190 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.708e-11 Identity = 65/225 (28.89%), Postives = 101/225 (44.89%), Query Frame = 3 Query: 6 PEDLYEAVIARLPIATFFRFRSVCQKWNSLLKSHSF-SQHCAQVPQGIPWFYTITH-ENVNSGAMYDPSLKKWHH-PTISSLPTKMIILPVASAGGLVCFL--DIGHRNFYVCNPLTQSFKELPARSVKVWSRVAVGMTLNGNSTSSGYKILWVGCDGEYE------IYDSLRNSWTRPGSMPSNIKLPLSLNFRSQAVSVDGILYFMRSDPEGIVSYNMVTGVW 647 P L E +++ LP T RS+ + SL+ S SF S H +P F ++H ++ NS +++P+L W P SL ++S+ GL+CF + + NPLT+S +RS+K+ L+ ++ GYKI + +YDS SW + G + L F V +G LYF RS+P IVS ++ G W Sbjct: 52 PNHLLEHILSLLPFKTLLTLRSISRHLRSLILSPSFISDHSFSLPS----FLLLSHPQSFNSFPLFNPNLISWCTLPLPRSLSLTCASSLLSSSNGLLCFSLSPSSVSSLSIFNPLTRS-----SRSIKLPCYPFPFELLSLVTSPKGYKIFTLCSSSSAASSRSVCLYDSGDRSWRKFGGVDQ----VLPRGFNQDGVFYNGSLYFARSEPFLIVSVDLNDGKW 263 The following BLAST results are available for this feature:
BLAST of FC930313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930313 ID=FC930313; Name=FC930313; organism=Citrus clementina; type=EST; length=721bpback to top |