FC930348
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930348 vs. ExPASy Swiss-Prot
Match: Y5195_ARATH (UPF0717 protein At5g11950 OS=Arabidopsis thaliana GN=At5g11950 PE=1 SV=1) HSP 1 Score: 282.722 bits (722), Expect = 1.327e-75 Identity = 135/192 (70.31%), Postives = 160/192 (83.33%), Query Frame = 2 Query: 137 NNQSKFNRICVFCGSSAGKKSTYKDAAIELSKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIPKTLMPREITGETVGEVKPVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNARHIIVSAPNAKELMKQMEEYFPQHERVA 712 N +S+F +ICVFCGS +G + + DAAIEL ELV R IDLVYGGGSVGLMGLIS+ VY+GG HV+G+IPK LMP EI+GETVG+V+ VADMH+RKA MA+ ++AFIALPGGYGT+EELLE+ITW+QLGIH K VGLLNVDGYYN+LL D VEEGFI P AR+I+VSAP AKELM++MEEY P H VA Sbjct: 4 NQRSRFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGSVGLMGLISRRVYEGGLHVLGIIPKALMPIEISGETVGDVRVVADMHERKAAMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIKPGARNIVVSAPTAKELMEKMEEYTPSHMHVA 195
BLAST of FC930348 vs. ExPASy Swiss-Prot
Match: Y4923_PSEAE (UPF0717 protein PA4923 OS=Pseudomonas aeruginosa GN=PA4923 PE=3 SV=2) HSP 1 Score: 171.785 bits (434), Expect = 3.299e-42 Identity = 84/178 (47.19%), Postives = 117/178 (65.73%), Query Frame = 2 Query: 161 ICVFCGSSAGKKSTYKDAAIELSKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIPKTLMPREITGETVGEVKPVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNARHIIVSAPNAKELMKQMEEYFP 694 +CVFCG+S G Y++AA+ L + L R + LVYGGG+VGLMG ++ A G VIG+IP++L EI + + ++ V MH RKA MA+ +DAFIALPGG GTLEEL EV TW QLG H KP+GLL V+G+Y+ LLTF+D V+E F+ R ++ + + L+ + + P Sbjct: 6 VCVFCGASPGASPVYQEAAVALGRHLAERGLTLVYGGGAVGLMGTVADAALAAGGEVIGIIPQSLQEAEIGHKGLTRLEVVDGMHARKARMAELADAFIALPGGLGTLEELFEVWTWGQLGYHAKPLGLLEVNGFYDPLLTFLDHLVDERFVRAEHRGMLQRGASPEALLDALAAWTP 183
BLAST of FC930348 vs. ExPASy Swiss-Prot
Match: YVDD_BACSU (UPF0717 protein yvdD OS=Bacillus subtilis GN=yvdD PE=1 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.001e-39 Identity = 77/176 (43.75%), Postives = 114/176 (64.77%), Query Frame = 2 Query: 161 ICVFCGSSAGKKSTYKDAAIELSKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIPKTLMPREITGETVGEVKPVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNARHIIVSAPNAKELMKQMEEY 688 ICVF GS+ G YK A EL + + I LVYGG VGLMG I+ A+ + G IGV+P L E+ + + E+ V MH+RKA+M++ +D FI++PGG+GT EEL EV+ WAQ+GIH KP+GL NV+GY+ ++ + +++EGF + + +I S+ EL++QM+ Y Sbjct: 4 ICVFAGSNPGGNEAYKRKAAELGVYMAEQGIGLVYGGSRVGLMGTIADAIMENGGTAIGVMPSGLFSGEVVHQNLTELIEVNGMHERKAKMSELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNVNGYFEPMMKMVKYSIQEGFSNESHLKLIHSSSRPDELIEQMQNY 179
BLAST of FC930348 vs. ExPASy Swiss-Prot
Match: YJF5_YEAST (UPF0717 protein YJL055W OS=Saccharomyces cerevisiae GN=YJL055W PE=1 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.705e-36 Identity = 84/202 (41.58%), Postives = 116/202 (57.43%), Query Frame = 2 Query: 161 ICVFCGSSAGKKSTYKDAAIELSKELVARNIDLVYGGGSVGLMGLISQAVY--DGGRHVIGVIPKTLMPREIT------------------------GETVGEVKPVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNARHIIVSAPNAKELMKQMEEY 688 +CV+CGSS G K+ Y ++A EL LVYGGG+ GLMG I+++ D V G+IP L+ +E T E GE V DMH RK MA SDAF+A+PGGYGT EE++E ITW+QLGIH+KP+ L N+DG+Y+ LL F+ +++E FIS II A +E++ ++E+Y Sbjct: 21 VCVYCGSSFGAKALYSESAEELGALFHKLGWKLVYGGGTTGLMGKIARSTMGPDLSGQVHGIIPNALVSKERTDEDKEDVNKALLESVENHKGATPISEEYGETTIVPDMHTRKRMMANLSDAFVAMPGGYGTFEEIMECITWSQLGIHNKPIILFNIDGFYDKLLEFLKHSIQERFISVKNGEIIQVASTPQEVVDKIEKY 222
BLAST of FC930348 vs. ExPASy Swiss-Prot
Match: FAS6_RHOFA (UPF0717 protein ORF6 in fasciation locus OS=Rhodococcus fascians GN=fas6 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.640e-34 Identity = 76/163 (46.63%), Postives = 103/163 (63.19%), Query Frame = 2 Query: 161 ICVFCGSSAGKKSTYKDAAIELSKELVARNIDLVYGGGSVGLMGLISQAVYDGGRHVIGVIPK--TLMPREITGETVGEVKPVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLTFIDKAVEEGFISPNARHIIV 643 + VFCG+ G+ + Y A + + + + LVYGG VGLMG ++ A D G V+GVIP+ T +P E + E+ V DMHQRKA MA+ DAFIALPGG GT EE EV+TW+ LG+H+KP LLN + YY LL++I+ A EGFI+P R ++ Sbjct: 22 VTVFCGAMPGRGTKYGQLAEGMGRAIARSKLRLVYGGARVGLMGTLANAALDSGGTVVGVIPESFTAIP-EAAHHGLTELHVVHDMHQRKALMAELGDAFIALPGGVGTAEEFFEVLTWSHLGLHNKPCVLLNDNEYYRPLLSYIEHAAVEGFITPATRSRVI 183 The following BLAST results are available for this feature:
BLAST of FC930348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930348 ID=FC930348; Name=FC930348; organism=Citrus clementina; type=EST; length=719bpback to top |