FC930382

Overview
NameFC930382
Unique NameFC930382
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length307
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig794 contig Ccv1_Contig794:10..316. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK2_CATRO (S-adenosylmethionine synthetase 2 OS=Catharanthus roseus GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 1.487e-51
Identity = 100/102 (98.04%), Postives = 101/102 (99.02%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTY TGKIPDKEIL+IVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD
Sbjct:  276 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 377
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK_PHALU (S-adenosylmethionine synthetase OS=Phaseolus lunatus GN=SAMS PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 2.804e-50
Identity = 98/102 (96.08%), Postives = 100/102 (98.04%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYIVRQAAKSIVAS LARRCIVQVSYAIGVPEPLSVFVDTY TGKIPDKEIL+IVKENFDFRPGMI+INLDLKRGGNSRFLKTAAYGHFGREDPD
Sbjct:  277 TKVDRSGAYIVRQAAKSIVASELARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNSRFLKTAAYGHFGREDPD 378
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK_CAMSI (S-adenosylmethionine synthetase OS=Camellia sinensis GN=SAM PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 2.804e-50
Identity = 97/102 (95.10%), Postives = 101/102 (99.02%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVDTY TGKIPDKEIL+IVKE+FDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGR+DPD
Sbjct:  276 TKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKESFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGRDDPD 377
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK4_VITVI (S-adenosylmethionine synthetase 4 OS=Vitis vinifera GN=METK4 PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 2.804e-50
Identity = 97/102 (95.10%), Postives = 100/102 (98.04%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTY TGKIPDKEIL+IVKE+FDFRPGMIAINLDLKRGGN RFLKTAAYGHFGR+DPD
Sbjct:  276 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYATGKIPDKEILKIVKESFDFRPGMIAINLDLKRGGNGRFLKTAAYGHFGRDDPD 377
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK5_POPTR (S-adenosylmethionine synthetase 5 OS=Populus trichocarpa GN=METK5 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 3.662e-50
Identity = 97/102 (95.10%), Postives = 101/102 (99.02%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTY TGKIPDKEIL+IVKE+FDFRPGMI+INLDLKRGGNSRFLKTAAYGHFGR+DPD
Sbjct:  277 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILQIVKESFDFRPGMISINLDLKRGGNSRFLKTAAYGHFGRDDPD 378
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK3_POPTR (S-adenosylmethionine synthetase 3 OS=Populus trichocarpa GN=METK3 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 3.662e-50
Identity = 97/102 (95.10%), Postives = 101/102 (99.02%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTY TGKIPDKEIL+IVKE+FDFRPGMI+INLDLKRGGNSRFLKTAAYGHFGR+DPD
Sbjct:  277 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILQIVKESFDFRPGMISINLDLKRGGNSRFLKTAAYGHFGRDDPD 378
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK_POPDE (S-adenosylmethionine synthetase OS=Populus deltoides GN=METK PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 4.783e-50
Identity = 97/102 (95.10%), Postives = 100/102 (98.04%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTY TGKIPDKEIL+IVKE FDFRPGMI+INLDLKRGGNSRFLKTAAYGHFGR+DPD
Sbjct:  277 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILQIVKERFDFRPGMISINLDLKRGGNSRFLKTAAYGHFGRDDPD 378
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK_CARPA (S-adenosylmethionine synthetase OS=Carica papaya GN=SAMS PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 4.783e-50
Identity = 96/102 (94.12%), Postives = 100/102 (98.04%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSV+VDTY TGKIPDKEIL+IVKENFDFRPGMI INLDLKRGGNSRFLKTAAYGHFGR+DPD
Sbjct:  276 TKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVYVDTYGTGKIPDKEILKIVKENFDFRPGMITINLDLKRGGNSRFLKTAAYGHFGRDDPD 377
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK1_SOLTU (S-adenosylmethionine synthetase 1 OS=Solanum tuberosum GN=METK1 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 4.783e-50
Identity = 96/102 (94.12%), Postives = 100/102 (98.04%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTY TGKIPDKEIL+IVKENFDFRPGM++INLDLKRGGN RFLKTAAYGHFGR+DPD
Sbjct:  276 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMMSINLDLKRGGNGRFLKTAAYGHFGRDDPD 377
[Close]
BLAST of FC930382 vs. ExPASy Swiss-Prot
Match: METK5_VITVI (S-adenosylmethionine synthetase 5 OS=Vitis vinifera GN=METK5 PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 6.246e-50
Identity = 96/102 (94.12%), Postives = 100/102 (98.04%), Query Frame = 1 
Query:    1 TKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYRTGKIPDKEILRIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 306
            TKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVD+Y TGKIPDKEIL+IVKENFDFRPGMIAINLDLKRGGN RFLKTAAYGHFGR+DPD
Sbjct:  276 TKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMIAINLDLKRGGNGRFLKTAAYGHFGRDDPD 377
The following BLAST results are available for this feature:
BLAST of FC930382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_CATRO1.487e-5198.04S-adenosylmethionine synthetase 2 OS=Catharanthus ... [more]
METK_PHALU2.804e-5096.08S-adenosylmethionine synthetase OS=Phaseolus lunat... [more]
METK_CAMSI2.804e-5095.10S-adenosylmethionine synthetase OS=Camellia sinens... [more]
METK4_VITVI2.804e-5095.10S-adenosylmethionine synthetase 4 OS=Vitis vinifer... [more]
METK5_POPTR3.662e-5095.10S-adenosylmethionine synthetase 5 OS=Populus trich... [more]
METK3_POPTR3.662e-5095.10S-adenosylmethionine synthetase 3 OS=Populus trich... [more]
METK_POPDE4.783e-5095.10S-adenosylmethionine synthetase OS=Populus deltoid... [more]
METK_CARPA4.783e-5094.12S-adenosylmethionine synthetase OS=Carica papaya G... [more]
METK1_SOLTU4.783e-5094.12S-adenosylmethionine synthetase 1 OS=Solanum tuber... [more]
METK5_VITVI6.246e-5094.12S-adenosylmethionine synthetase 5 OS=Vitis vinifer... [more]

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Properties
Property NameValue
Genbank descriptionC34007A01EF PostHarvC1 Citrus clementina cDNA clone C34007A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930382 ID=FC930382; Name=FC930382; organism=Citrus clementina; type=EST; length=307bp
ACCAAGGTTGATAGAAGTGGTGCTTACATTGTGAGGCAGGCAGCAAAGAG
CATCGTTGCCAGTGGCCTTGCTCGCCGCTGCATTGTGCAGGTTTCTTATG
CTATTGGTGTCCCAGAGCCCCTTTCAGTGTTTGTTGACACTTATCGAACT
GGAAAGATTCCGGACAAGGAGATCCTGAGGATTGTGAAGGAGAACTTTGA
TTTCAGGCCTGGAATGATTGCCATTAACTTGGATCTCAAGAGGGGAGGAA
ATAGCAGGTTTTTGAAGACTGCTGCATATGGGCATTTTGGAAGGGAGGAT
CCTGACT
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