FC930396
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930396 vs. ExPASy Swiss-Prot
Match: GEML5_ARATH (GEM-like protein 5 OS=Arabidopsis thaliana GN=At5g13200 PE=1 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 1.121e-82 Identity = 141/190 (74.21%), Postives = 166/190 (87.37%), Query Frame = 1 Query: 151 PPSEEEERKKWGTHIMGAPAVPSAHPDNQKAASWNAENRQQIYHQSYVEYSPIDKPS-NNPLEPVIHAFNTWSTKAETIARNIWHNLKTGPSVSEAAWGKVNLTAKAITEGGFESLFKQIFATDPNEKLKKTFACYLSTTTGPVAGTLYLSTARVAFCSDRPLCFTAPSGQEAWSYYKGMIPLANISSVN 717 P S ++KKWGTH+MGAPA P AHPDNQ+AA+W A + QQ +Q YV YSP++ P+ NNPLEPVI F+TWS KAET+ARN+WHNLKTGPS+SE AWGKVNLTAKAIT+GGFESLF+QIF T+PNE LKKTFACYLSTTTGPVAGT+YLS ARVAFCSDRPL FTAPSGQE+WSYY+ ++PLAN+++VN Sbjct: 29 PSSSSPDQKKWGTHVMGAPAAPVAHPDNQQAAAWVAGDNQQTQYQPYVIYSPVEHPTTNNPLEPVIGMFHTWSRKAETVARNLWHNLKTGPSMSETAWGKVNLTAKAITKGGFESLFRQIFGTEPNETLKKTFACYLSTTTGPVAGTVYLSNARVAFCSDRPLYFTAPSGQESWSYYRVVVPLANVATVN 218
BLAST of FC930396 vs. ExPASy Swiss-Prot
Match: GEM_ARATH (GLABRA2 expression modulator OS=Arabidopsis thaliana GN=GEM PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.836e-31 Identity = 79/205 (38.54%), Postives = 112/205 (54.63%), Query Frame = 1 Query: 133 STLTEAPPSEEEERKK---WGTHIMGAPAVPSAHPDNQKAASWNAENRQQIYHQSYVEYSPIDKPSNNPLEPVIHAFNTW-------STKAETIARNIWHNLKTGPSVSEAAWGKVNLTAKAITEGGFESLFKQIFATDPNEKLKKTFACYLSTTTGPVAGTLYLSTARVAFCSDRPLCFTAPSGQEAWSYYKGMIPLANISSVN 717 ST +AP KK W ++ S PD QKAAS ++ +S E S D + +E V W + K E++A N W +L+T PS ++AA G++ + K EGG+E +F+Q F TDP E+L +FACYLST+ GPV G LY+S+A++A+CSD PL + Q WSYYK +IPL + +VN Sbjct: 53 STPVKAPSRTSSGSKKSVHWSPELVSG----SQEPD-QKAASSSSAGSNPYIARSPAETS--DASLKDTMETVKGVLGRWGKRVAEAAKKTESLAGNTWQHLRTAPSFADAAMGRIAQSTKVFAEGGYEKIFRQTFETDPEEQLLNSFACYLSTSAGPVMGVLYISSAKLAYCSDNPLSY-KNGDQTEWSYYKVVIPLHQLKAVN 249
BLAST of FC930396 vs. ExPASy Swiss-Prot
Match: GEML1_ARATH (GEM-like protein 1 OS=Arabidopsis thaliana GN=FIP1 PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.076e-28 Identity = 72/178 (40.45%), Postives = 98/178 (55.06%), Query Frame = 1 Query: 205 PAVPSAHPDNQKAASWNAENRQQIYHQSYVEYSPIDKPSNNPLEPVIHAFNTW-------STKAETIARNIWHNLKTGPSVSEAAWGKVNLTAKAITEGGFESLFKQIFATDPNEKLKKTFACYLSTTTGPVAGTLYLSTARVAFCSDRPLCFTAPSGQEAWSYYKGMIPLANISSVN 717 P P P A + AE+ YV SP + N ++ V W + KAE +A N W +LKTGPSV++AA ++ K + EGG+E +FKQ F P+EKL KT+ACYLST+ GPV G +YLST ++AF SD PL + Q WSYYK ++P + +VN Sbjct: 45 PPPPQPIPTGAAATTMPAESNP------YVSPSPAPR---NTMDSVKDTLGKWGKMAADATKKAEDLAGNFWQHLKTGPSVADAAVSRIAQGTKILAEGGYEKVFKQTFDCLPDEKLLKTYACYLSTSAGPVLGVMYLSTHKLAFSSDNPLSY-KEGEQTLWSYYKVVLPANQLKAVN 212
BLAST of FC930396 vs. ExPASy Swiss-Prot
Match: GEML8_ARATH (Putative GEM-like protein 8 OS=Arabidopsis thaliana GN=At5g23370 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.924e-19 Identity = 44/116 (37.93%), Postives = 70/116 (60.34%), Query Frame = 1 Query: 370 KAETIARNIWHNLKTGPSVSEAAWGKVNLTAKAITEGGFESLFKQIFATDPNEKLKKTFACYLSTTTGPVAGTLYLSTARVAFCSDRPLCFTAPSGQEAWSYYKGMIPLANISSVN 717 K ++ + K GP ++E K++L A+ + GG E ++K++F EKL K + CYLSTT GP+AG L++S+ ++AFCS+R + +P G+ +YK IPL I+ VN Sbjct: 56 KNDSFTNGVRDQDKLGPKLTETVKRKLSLGARILQMGGLEKIYKRLFKVSDEEKLFKAYQCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGELNRVHYKVSIPLCKINGVN 171
BLAST of FC930396 vs. ExPASy Swiss-Prot
Match: GEML6_ARATH (GEM-like protein 6 OS=Arabidopsis thaliana GN=At5g23350 PE=2 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 6.693e-19 Identity = 44/103 (42.72%), Postives = 66/103 (64.08%), Query Frame = 1 Query: 409 KTGPSVSEAAWGKVNLTAKAITEGGFESLFKQIFATDPNEKLKKTFACYLSTTTGPVAGTLYLSTARVAFCSDRPLCFTAPSGQEAWSYYKGMIPLANISSVN 717 K GP ++E K++L AK + GG E ++K++F EKL K + CYLSTT GP+AG L++S+ ++AFCS+R + +P G + +YK IPL I+ VN Sbjct: 69 KLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDQEKLFKAYQCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGVLSRVHYKVSIPLCKINGVN 171
BLAST of FC930396 vs. ExPASy Swiss-Prot
Match: GEML7_ARATH (GEM-like protein 7 OS=Arabidopsis thaliana GN=At5g23360 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.491e-18 Identity = 44/103 (42.72%), Postives = 65/103 (63.11%), Query Frame = 1 Query: 409 KTGPSVSEAAWGKVNLTAKAITEGGFESLFKQIFATDPNEKLKKTFACYLSTTTGPVAGTLYLSTARVAFCSDRPLCFTAPSGQEAWSYYKGMIPLANISSVN 717 K GP ++E K++L AK + GG E ++K++F EKL K + CYLSTT G +AG L++S+ ++AFCS+R + T+P G +YK IPL I+ VN Sbjct: 61 KLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDKEKLFKAYQCYLSTTEGSIAGLLFISSKKIAFCSERSIKVTSPQGDLTRVHYKVSIPLCKINGVN 163
BLAST of FC930396 vs. ExPASy Swiss-Prot
Match: GEML3_ARATH (Putative GEM-like protein 3 OS=Arabidopsis thaliana GN=At4g40100 PE=3 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.491e-18 Identity = 63/193 (32.64%), Postives = 93/193 (48.19%), Query Frame = 1 Query: 163 EEERKKWGTHIMGAPAVPSAHPDNQKAASWNAENRQQIYHQSYVEYSPIDKPSNNPLEPVIHAFNTW-------STKAETIARNIW-HNLKTGPSVSEAAWGKVNLTAKAITEGGFESLFKQIFATDPNEKLKKTFACYLSTTTGPVAGTLYLSTARVAFCSDRPLCFTAPSGQEAWSYYKGMIPLANISSVN 717 + E W ++ S PD + +S +A ++ E S D +E V W + KAE++A N W H L+ AA G++ + K + EGG+E +F+Q F T P E+L+ +FACYLST+ GPV G LY+STA++A+CSD L +IPL + SVN Sbjct: 24 DRENLHWNPELVSE----SPAPDEKALSSSSAARSNPYVARAPTETS--DASLKETMESVKGVLGRWGRRVGEAAMKAESLAGNTWQHPLR-------AAMGRIAQSTKVLAEGGYEKIFRQTFETVPEEQLQNSFACYLSTSAGPVMGVLYVSTAKLAYCSDTSLV---------------VIPLHQLKSVN 188
BLAST of FC930396 vs. ExPASy Swiss-Prot
Match: GEML4_ARATH (GEM-like protein 4 OS=Arabidopsis thaliana GN=At5g08350 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.400e-18 Identity = 44/116 (37.93%), Postives = 66/116 (56.90%), Query Frame = 1 Query: 370 KAETIARNIWHNLKTGPSVSEAAWGKVNLTAKAITEGGFESLFKQIFATDPNEKLKKTFACYLSTTTGPVAGTLYLSTARVAFCSDRPLCFTAPSGQEAWSYYKGMIPLANISSVN 717 K + + K P ++E K++L A+ + GG E +FK++F EKL K + CYLSTT GP+AG L++S+ ++AFCS+R + +P G +YK IPL I VN Sbjct: 55 KTDGFTNGVRDQSKIRPKLTETVKRKLSLGARILQVGGLEKIFKRLFRVSEGEKLFKMYQCYLSTTAGPIAGLLFISSKKMAFCSERSIKVDSPQGDIIRVHYKVSIPLCKIDRVN 170
BLAST of FC930396 vs. ExPASy Swiss-Prot
Match: GEML2_ARATH (GEM-like protein 2 OS=Arabidopsis thaliana GN=At4g01600 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.673e-17 Identity = 46/117 (39.32%), Postives = 71/117 (60.68%), Query Frame = 1 Query: 370 KAETIARNIWHNLKTGPSVSEAAWGKVNLTAKAITEGGFESLFKQIFATDPNEKLKKTFACYLSTTTGPVAGTLYLSTARVAFCSDRPLCF-TAPSGQEAWSYYKGMIPLANISSVN 717 KAE + + +LK PS+S+AA +++ K I EGG E +F++ F EKL +F CY+STT+GPV G +Y+S R+AFCSD + ++ G +YYK ++ ISS++ Sbjct: 66 KAEALVGGLKDHLKFSPSISDAAMARLSQGTKMIVEGGPERVFQREFGVLAVEKLLDSFVCYISTTSGPVTGVIYISNRRIAFCSDYAIRLPSSAGGNGVAAYYKVVMEWEKISSIS 182 The following BLAST results are available for this feature:
BLAST of FC930396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930396 ID=FC930396; Name=FC930396; organism=Citrus clementina; type=EST; length=717bpback to top |