FC930400

Overview
NameFC930400
Unique NameFC930400
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930400 vs. ExPASy Swiss-Prot
Match: AAT5_ARATH (Aspartate aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=ASP5 PE=1 SV=2)

HSP 1 Score: 440.654 bits (1132), Expect = 3.960e-123
Identity = 216/240 (90.00%), Postives = 227/240 (94.58%), Query Frame = 1
Query:   10 KLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMKCVXSSSD 729
            KLNLGVGAYRTEELQPYVL+VVKKAENLMLERG+NKEYLPIEGLAAFNK TAELLFGA + V+KEQRVAT+QGLSGTGSLRLAAALIERYFPGAKV+ISSPTWGNHKNIFNDA+VPWSEYRYYDPKT+GLDFEGMIADIK AP GSFILLHGCAHNPTGIDPTPEQW KIADVIQEKNHIPFFDVAYQGFASGSLD DA+SVRLFA RGME  VAQSYSKNLGLYAERIGA+  V SS+D
Sbjct:   79 KLNLGVGAYRTEELQPYVLNVVKKAENLMLERGDNKEYLPIEGLAAFNKATAELLFGAGHPVIKEQRVATIQGLSGTGSLRLAAALIERYFPGAKVVISSPTWGNHKNIFNDAKVPWSEYRYYDPKTIGLDFEGMIADIKEAPEGSFILLHGCAHNPTGIDPTPEQWVKIADVIQEKNHIPFFDVAYQGFASGSLDEDAASVRLFAERGMEFFVAQSYSKNLGLYAERIGAINVVCSSAD 318          
BLAST of FC930400 vs. ExPASy Swiss-Prot
Match: AATM_LUPAN (Aspartate aminotransferase P2, mitochondrial (Fragment) OS=Lupinus angustifolius PE=2 SV=1)

HSP 1 Score: 433.335 bits (1113), Expect = 6.321e-121
Identity = 211/242 (87.19%), Postives = 224/242 (92.56%), Query Frame = 1
Query:    4 EKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMKCVXSSSD 729
            + KLNLGVGAYRTEELQPYVL VV KAENLMLERG+NKEYL IEGLAAFNK TAELL GADN  +K+QRVATVQGLSGTGSLRL AALIERYFPGAKVLIS+PTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMI DIKAAP G+F+LLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLD DA+SVRLF  RG+E+LVAQSYSKNLGLYAERIGA+  + SS +
Sbjct:   78 DAKLNLGVGAYRTEELQPYVLKVVNKAENLMLERGQNKEYLAIEGLAAFNKATAELLLGADNPAIKQQRVATVQGLSGTGSLRLGAALIERYFPGAKVLISAPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIEDIKAAPEGTFVLLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDEDAASVRLFVARGLEVLVAQSYSKNLGLYAERIGAINVISSSPE 319          
BLAST of FC930400 vs. ExPASy Swiss-Prot
Match: AAT1_MEDSA (Aspartate aminotransferase 1 OS=Medicago sativa GN=AAT-1 PE=2 SV=2)

HSP 1 Score: 293.123 bits (749), Expect = 1.021e-78
Identity = 141/242 (58.26%), Postives = 182/242 (75.21%), Query Frame = 1
Query:   10 KLNLGVGAYRTEELQPYVLDVVKKAENLML-ERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMKCVXSSSDL 732
            KLNLGVGAYRTEE +P VLDVV++ E  +L +   NKEY+PI GLA FNK++A+L+FGAD+  ++E RV TVQGLSGTGSLR+    + +++    + + +PTWGNH  +FN A +    YRYY P T GLDF+G++ D+ +AP GS +LLH CAHNPTG+DPT EQWE+I  +I+ K+ +PFFD AYQGFASGSLD DA  VRLF   G ELLVAQSY+KN+GLY ER+GA+  V  S+D+
Sbjct:   44 KLNLGVGAYRTEEGKPLVLDVVRRVERQLLNDMSRNKEYIPIVGLADFNKLSAKLIFGADSPAIQENRVTTVQGLSGTGSLRVGGEFLAKHYHQRIIYLPTPTWGNHTKVFNLAGLTVKTYRYYAPATRGLDFQGLLEDLGSAPSGSVVLLHACAHNPTGVDPTLEQWEQIRQLIRSKSLLPFFDSAYQGFASGSLDADAQPVRLFVADGGELLVAQSYAKNMGLYGERVGALSIVSKSADV 285          
BLAST of FC930400 vs. ExPASy Swiss-Prot
Match: AATC_DAUCA (Aspartate aminotransferase, cytoplasmic OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.474e-77
Identity = 142/242 (58.68%), Postives = 183/242 (75.62%), Query Frame = 1
Query:   10 KLNLGVGAYRTEELQPYVLDVVKKAENLML-ERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMKCVXSSSDL 732
            KLNLGVGAYRTEE +P VL+VVKKAE +++ ++   KEYLPI GLA FNK++A+L+FGAD+  ++E RVATVQ LSGTGSLR+    + R++    V I  PTWGNH  IF  A +    YRYY+P+T GLDFEGM+ D+ +AP G+ +LLH CAHNPTG+DPT EQWE+I  +++ K+ +PFFD AYQGFASGSLD DA SVR+F   G E L AQSY+KN+GLY ER+GA+  V  ++D+
Sbjct:   31 KLNLGVGAYRTEEGKPLVLNVVKKAEQMLVNDQSRVKEYLPIVGLADFNKLSAKLIFGADSPAIQENRVATVQCLSGTGSLRVGGEFLARHYHEHTVYIPQPTWGNHPKIFTLAGLSVKTYRYYNPETRGLDFEGMLEDLGSAPLGAIVLLHACAHNPTGVDPTIEQWEQIRQLMRSKSLLPFFDSAYQGFASGSLDADAQSVRIFVADGGECLAAQSYAKNMGLYGERVGALSIVCKTADV 272          
BLAST of FC930400 vs. ExPASy Swiss-Prot
Match: AATC_ORYSJ (Aspartate aminotransferase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os01g0760600 PE=2 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 4.290e-77
Identity = 137/242 (56.61%), Postives = 181/242 (74.79%), Query Frame = 1
Query:   10 KLNLGVGAYRTEELQPYVLDVVKKAENLMLERGEN-KEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMKCVXSSSDL 732
            K+NLGVGAYRTEE +P VL+VV++AE +++      KEYLPI GLA FNK++A+L+FGAD+  ++E RVATVQ LSGTGSLR+    + R++    + I  PTWGNH  +F  A +    YRYYDP T GLDF+G++ D+ +AP G+ +LLH CAHNPTG+DPT +QWE+I  +++ K  +PFFD AYQGFASGSLD DA SVR+F   G ELL+AQSY+KN+GLY ER+GA+  V  S+D+
Sbjct:   33 KVNLGVGAYRTEEGKPLVLNVVRRAEQMLINNPSRVKEYLPITGLADFNKLSAKLIFGADSPAIQENRVATVQCLSGTGSLRVGGEFLARHYHERTIYIPQPTWGNHPKVFTLAGLTVRSYRYYDPATRGLDFQGLLEDLGSAPSGAIVLLHACAHNPTGVDPTLDQWEQIRQLMRSKALLPFFDSAYQGFASGSLDQDAQSVRMFVADGGELLMAQSYAKNMGLYGERVGALSIVCGSADV 274          
BLAST of FC930400 vs. ExPASy Swiss-Prot
Match: AAT2_ARATH (Aspartate aminotransferase, cytoplasmic isozyme 1 OS=Arabidopsis thaliana GN=ASP2 PE=1 SV=2)

HSP 1 Score: 283.878 bits (725), Expect = 6.194e-76
Identity = 136/242 (56.20%), Postives = 180/242 (74.38%), Query Frame = 1
Query:   10 KLNLGVGAYRTEELQPYVLDVVKKAEN-LMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMKCVXSSSDL 732
            K+NLGVGAYRTEE +P VLDVV+KAE  L+ +    KEY+PI G++ FNK++A+L+ GAD+  + E RV TVQ LSGTGSLR+ A  ++ ++  + + I  PTWGNH  +FN A +    +RYYDP T GLDF+G++ D+ AAP G+ +LLH CAHNPTG+DPT EQWE+I  +++ K+ +PFFD AYQGFASGSLD DA SVR F   G E L+AQSY+KN+GLY ER+GA+  V  S+D+
Sbjct:   31 KINLGVGAYRTEEGKPLVLDVVRKAEQQLVNDPSRVKEYIPIVGISDFNKLSAKLILGADSPAITESRVTTVQCLSGTGSLRVGAEFLKTHYHQSVIYIPKPTWGNHPKVFNLAGLSVEYFRYYDPATRGLDFKGLLEDLGAAPSGAIVLLHACAHNPTGVDPTSEQWEQIRQLMRSKSLLPFFDSAYQGFASGSLDTDAQSVRTFVADGGECLIAQSYAKNMGLYGERVGALSIVCKSADV 272          
BLAST of FC930400 vs. ExPASy Swiss-Prot
Match: AAT3_ARATH (Aspartate aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=ASP3 PE=1 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 7.572e-74
Identity = 133/242 (54.96%), Postives = 177/242 (73.14%), Query Frame = 1
Query:   10 KLNLGVGAYRTEELQPYVLDVVKKAENLML-ERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMKCVXSSSDL 732
            KLNLGVGAYRTEE +P VL+VV+KAE  ++ +R   KEYLPI GL  FNK++A+L+ GAD+  ++E R+ TV+ LSGTGSLR+    + +++    + I+ PTWGNH  IF  A +    YRYYDP T GL+F+G++ D+ AA  GS +LLH CAHNPTG+DPT +QWE+I  +++ K  +PFFD AYQGFASGSLD DA  +R+F   G E LVAQSY+KN+GLY ER+GA+  V  S+D+
Sbjct:   75 KLNLGVGAYRTEEGKPLVLNVVRKAEQQLINDRTRIKEYLPIVGLVEFNKLSAKLILGADSPAIRENRITTVECLSGTGSLRVGGEFLAKHYHQKTIYITQPTWGNHPKIFTLAGLTVKTYRYYDPATRGLNFQGLLEDLGAAAPGSIVLLHACAHNPTGVDPTIQQWEQIRKLMRSKGLMPFFDSAYQGFASGSLDTDAKPIRMFVADGGECLVAQSYAKNMGLYGERVGALSIVCKSADV 316          
BLAST of FC930400 vs. ExPASy Swiss-Prot
Match: AATM_DICDI (Aspartate aminotransferase, mitochondrial OS=Dictyostelium discoideum GN=aatA PE=3 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 1.687e-73
Identity = 130/240 (54.17%), Postives = 169/240 (70.42%), Query Frame = 1
Query:   10 KLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMKCVXSSSD 729
            K+NLGVGAYR E  +PYVLD VKKA+  + E   + EY PI G+AAFN++ A+L  G +   +KE+R+ATVQ +SGTG+LR+AA    R+  G    + +PTWGNH  IFNDA +P   Y YY+P T GL+FE M  DI AAP GS ILLH CAHNPTG+DPT EQW+KI+++ +E+ H   FD AYQGFASGS + DA++VR+F   G  + + QS++KN GLY ERIGA   +  +SD
Sbjct:   54 KINLGVGAYRDENGKPYVLDCVKKADKKIYEANVDHEYAPIVGVAAFNQLAAQLALGEECKHIKEKRIATVQSISGTGALRIAADFFARFLKGKTAYVPNPTWGNHNVIFNDAGIPVKSYGYYNPATCGLNFEAMTKDIAAAPEGSIILLHACAHNPTGVDPTAEQWKKISEICKERGHFVLFDFAYQGFASGSPEKDAAAVRMFVEDGHNIALCQSFAKNFGLYGERIGAFSILTETSD 293          
BLAST of FC930400 vs. ExPASy Swiss-Prot
Match: AATC_DICDI (Aspartate aminotransferase, cytoplasmic OS=Dictyostelium discoideum GN=aatB PE=3 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 2.203e-73
Identity = 142/245 (57.96%), Postives = 173/245 (70.61%), Query Frame = 1
Query:    1 DEKKLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFP-GAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMKCVXSSSDL 732
            D +K++  VGAYR E  +PYVL  V +AE  +L  G  KEYLPI+G+  FNK++A+LL+G D  V KE+R+ TVQ LSGTG+LR+    I +Y P G  V IS P+W NH NI  ++ V  +EY YYDPKT GLDF GMI D++AAP GS  +LH CAHNPTG+DPT EQW  IADV++EKNHIPF D AYQG+ASG LD DA S RLF  RG E+  AQSYSKN GLY ER GA+  V    D+
Sbjct:   64 DPRKVDTSVGAYRDENGKPYVLKCVFEAEKRLL--GAPKEYLPIDGIPEFNKLSAKLLYG-DAMVGKEKRMVTVQALSGTGALRIGIIFIRKYLPAGTVVYISRPSWTNHHNICKESGVQSAEYAYYDPKTKGLDFTGMINDMRAAPNGSVFVLHLCAHNPTGVDPTHEQWNIIADVMREKNHIPFMDCAYQGYASGDLDYDAYSARLFLNRGFEMFSAQSYSKNFGLYGERTGALTIVSHREDV 305          
BLAST of FC930400 vs. ExPASy Swiss-Prot
Match: AAT4_ARATH (Aspartate aminotransferase, cytoplasmic isozyme 2 OS=Arabidopsis thaliana GN=ASP4 PE=2 SV=2)

HSP 1 Score: 268.47 bits (685), Expect = 2.693e-71
Identity = 131/241 (54.36%), Postives = 172/241 (71.37%), Query Frame = 1
Query:   10 KLNLGVGAYRTEELQPYVLDVVKKAENLMLERGENKEYLPIEGLAAFNKVTAELLFGADNSVLKEQRVATVQGLSGTGSLRLAAALIERYFPGAKVLISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFEGMIADIKAAPGGSFILLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDNDASSVRLFATRGMELLVAQSYSKNLGLYAERIGAMKCVXSSSDL 732
            KLNL  G YRTEE +P VLDVV++AE   L    +KEYLP+ GL  FNK++ +L+ G D+  LKE RV T Q LSGTGSLR+ A  +  +   + + + +PTWGNH  IF  A +    +RYYDPK+ GLDF+GM+ D+ AAP G+ ++L  CAHNPTG+DPT EQWEKI  +++ K+ +PFFD AYQGFASGSLD DA +VR+F   G E L+AQSY+KN+GLY ERIG++  V +S D+
Sbjct:   31 KLNLSAGTYRTEEGKPLVLDVVRRAEQ-QLANDLDKEYLPLNGLPEFNKLSTKLILGDDSPALKENRVVTTQCLSGTGSLRVGAEFLATHNKESVIFVPNPTWGNHPRIFTLAGLSVQYFRYYDPKSRGLDFKGMLEDLGAAPPGAIVVLQACAHNPTGVDPTFEQWEKIRRLVRSKSLLPFFDSAYQGFASGSLDADAQAVRMFVADGGECLIAQSYAKNMGLYGERIGSLTIVCTSEDV 270          
The following BLAST results are available for this feature:
BLAST of FC930400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
AAT5_ARATH3.960e-12390.00Aspartate aminotransferase, chloroplastic OS=Arabi... [more]
AATM_LUPAN6.321e-12187.19Aspartate aminotransferase P2, mitochondrial (Frag... [more]
AAT1_MEDSA1.021e-7858.26Aspartate aminotransferase 1 OS=Medicago sativa GN... [more]
AATC_DAUCA1.474e-7758.68Aspartate aminotransferase, cytoplasmic OS=Daucus ... [more]
AATC_ORYSJ4.290e-7756.61Aspartate aminotransferase, cytoplasmic OS=Oryza s... [more]
AAT2_ARATH6.194e-7656.20Aspartate aminotransferase, cytoplasmic isozyme 1 ... [more]
AAT3_ARATH7.572e-7454.96Aspartate aminotransferase, chloroplastic OS=Arabi... [more]
AATM_DICDI1.687e-7354.17Aspartate aminotransferase, mitochondrial OS=Dicty... [more]
AATC_DICDI2.203e-7357.96Aspartate aminotransferase, cytoplasmic OS=Dictyos... [more]
AAT4_ARATH2.693e-7154.36Aspartate aminotransferase, cytoplasmic isozyme 2 ... [more]

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Properties
Property NameValue
Genbank descriptionC34007B07EF PostHarvC1 Citrus clementina cDNA clone C34007B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930400 ID=FC930400; Name=FC930400; organism=Citrus clementina; type=EST; length=733bp
GATGAAAAGAAACTCAACCTTGGAGTCGGTGCTTATCGAACCGAAGAGCT
ACAGCCTTATGTGCTTGATGTTGTTAAGAAGGCAGAGAATCTTATGCTGG
AAAGGGGGGAAAACAAGGAGTATCTTCCAATTGAAGGTTTGGCTGCATTC
AATAAGGTGACAGCAGAGTTATTGTTTGGAGCTGACAACTCAGTGCTAAA
GGAACAAAGAGTTGCAACAGTTCAAGGTCTTTCAGGAACCGGTTCTCTTC
GGCTGGCTGCAGCTCTTATAGAACGATATTTTCCTGGGGCAAAAGTACTA
ATATCATCTCCGACATGGGGTAACCACAAGAACATTTTCAATGATGCTAG
AGTTCCATGGTCTGAGTACCGCTACTATGATCCAAAAACAGTGGGTTTGG
ATTTTGAGGGAATGATAGCAGACATAAAGGCAGCCCCTGGTGGATCTTTT
ATTCTGCTTCATGGTTGTGCTCACAACCCAACTGGCATTGATCCAACCCC
TGAACAATGGGAAAAAATTGCTGATGTCATTCAAGAGAAAAATCATATTC
CATTTTTCGATGTTGCCTACCAGGGATTTGCAAGTGGAAGCCTTGACAAT
GATGCATCATCTGTGAGATTGTTTGCCACACGTGGCATGGAGCTTCTTGT
TGCTCAGTCATACAGTAAAAACCTTGGTCTTTATGCAGAAAGGATTGGAG
CAATGAAATGTGTCTGNTCGTCATCTGATTTAG
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