FC930460

Overview
NameFC930460
Unique NameFC930460
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930460 vs. ExPASy Swiss-Prot
Match: XT1_ARATH (Xyloglucan 6-xylosyltransferase OS=Arabidopsis thaliana GN=XT1 PE=1 SV=1)

HSP 1 Score: 419.468 bits (1077), Expect = 8.391e-117
Identity = 193/229 (84.28%), Postives = 207/229 (90.39%), Query Frame = 1
Query:    1 DAQRAQWLNENPDFANFIN-KKPRVLLVTGSSPKACENPVGDHYLLKSIKNKIDYCRVHGLEIFYSTALLDAEMAGFWAKLPLIRNLLLGHPEVEFLWWMDSDAMFTDMTFEVPWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGKVRDDAGKKLTKELKDRPAFEADDQSAMVYSLATERDKWGDKVYLESEYYLHVNWAILVDR 684
            D QR  WL +NP F NF+   KPRVLLVTGS+PK CENPVGDHYLLKSIKNKIDYCR+HG+EIFY+ ALLDAEMAGFWAKLPLIR LLL HPE+EFLWWMDSDAMFTDM FE+PWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRN QWSLD+LDAWAPMGPKGK+R++AGK LT+ELKDRPAFEADDQSAMVY LATER+KWG KVYLES YYLH  W ILVDR
Sbjct:  127 DEQRRDWLKQNPSFPNFVAPNKPRVLLVTGSAPKPCENPVGDHYLLKSIKNKIDYCRIHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEIEFLWWMDSDAMFTDMVFELPWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRNSQWSLDLLDAWAPMGPKGKIREEAGKVLTRELKDRPAFEADDQSAMVYLLATEREKWGGKVYLESGYYLHGYWGILVDR 355          
BLAST of FC930460 vs. ExPASy Swiss-Prot
Match: GT2_ARATH (Putative glycosyltransferase 2 OS=Arabidopsis thaliana GN=GT2 PE=2 SV=1)

HSP 1 Score: 413.305 bits (1061), Expect = 6.014e-115
Identity = 190/229 (82.97%), Postives = 206/229 (89.96%), Query Frame = 1
Query:    1 DAQRAQWLNENPDFANFIN-KKPRVLLVTGSSPKACENPVGDHYLLKSIKNKIDYCRVHGLEIFYSTALLDAEMAGFWAKLPLIRNLLLGHPEVEFLWWMDSDAMFTDMTFEVPWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGKVRDDAGKKLTKELKDRPAFEADDQSAMVYSLATERDKWGDKVYLESEYYLHVNWAILVDR 684
            D QR+ WL +NP F NFI   KPRVLLVTGS+PK CENPVGDHYLLKSIKNKIDYCR+HG+EIFY+ ALLDAEMAGFWAKLPLIR LLL HPE+EFLWWMDSDAMFTDM FE+PWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRN QW+LD+LD WAPMGPKGK+R++AGK LT+ELKDRP FEADDQSAMVY LAT+RD WG+KVYLES YYLH  W ILVDR
Sbjct:  128 DEQRSDWLAKNPSFPNFIGPNKPRVLLVTGSAPKPCENPVGDHYLLKSIKNKIDYCRLHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEIEFLWWMDSDAMFTDMAFELPWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRNNQWALDLLDTWAPMGPKGKIREEAGKVLTRELKDRPVFEADDQSAMVYLLATQRDAWGNKVYLESGYYLHGYWGILVDR 356          
BLAST of FC930460 vs. ExPASy Swiss-Prot
Match: GT5_ARATH (Putative glycosyltransferase 5 OS=Arabidopsis thaliana GN=GT5 PE=2 SV=1)

HSP 1 Score: 348.591 bits (893), Expect = 1.819e-95
Identity = 150/228 (65.79%), Postives = 195/228 (85.53%), Query Frame = 1
Query:    1 DAQRAQWLNENPDFANFINKKPRVLLVTGSSPKACENPVGDHYLLKSIKNKIDYCRVHGLEIFYSTALLDAEMAGFWAKLPLIRNLLLGHPEVEFLWWMDSDAMFTDMTFEVPWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGKVRDDAGKKLTKELKDRPAFEADDQSAMVYSLATERDKWGDKVYLESEYYLHVNWAILVDR 684
            D+QR  WLN+NP+F + +N K R+LL+TGS PK C+NP+GDHYLLKS+KNKIDYCR+HG+EI Y+ A LD E+AG+WAKLP+IR L+L HPEVE++WWMDSDA+FTD+ F++P  RY+ +NLV+HG+ ++++DQK+WI LNTGSFLLRNCQWSLD+LDAWAPMGPKG +RD+AGK LT  LK RPAFEADDQSA++Y L +++D W +KV++E++YYLH  W  LVDR
Sbjct:  129 DSQRKVWLNQNPEFPSTVNGKARILLLTGSPPKPCDNPIGDHYLLKSVKNKIDYCRLHGIEIVYNMAHLDKELAGYWAKLPMIRRLMLSHPEVEWIWWMDSDALFTDILFQIPLARYQKHNLVIHGYPDLLFDQKSWIALNTGSFLLRNCQWSLDLLDAWAPMGPKGPIRDEAGKVLTAYLKGRPAFEADDQSALIYLLLSQKDTWMEKVFVENQYYLHGFWEGLVDR 356          
BLAST of FC930460 vs. ExPASy Swiss-Prot
Match: GT3_ARATH (Putative glycosyltransferase 3 OS=Arabidopsis thaliana GN=GT3 PE=2 SV=1)

HSP 1 Score: 347.436 bits (890), Expect = 4.052e-95
Identity = 148/228 (64.91%), Postives = 194/228 (85.09%), Query Frame = 1
Query:    1 DAQRAQWLNENPDFANFINKKPRVLLVTGSSPKACENPVGDHYLLKSIKNKIDYCRVHGLEIFYSTALLDAEMAGFWAKLPLIRNLLLGHPEVEFLWWMDSDAMFTDMTFEVPWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGKVRDDAGKKLTKELKDRPAFEADDQSAMVYSLATERDKWGDKVYLESEYYLHVNWAILVDR 684
            D +R  WL +NPDF +FIN K +VLL+TGS PK C+NP+GDHYLLKS+KNKIDYCR+HG+EI Y+ A LD E+AG+WAKLP+IR L+L HPE+E++WWMDSDA+FTDM FE+P  RY+++NLV+HG+ ++++DQK+WI LNTGSFL RNCQWSLD+LDAWAPMGPKG +R++AGK LT  LK RPAFEADDQSA++Y L ++++ W +KV++E++YYLH  W  LVD+
Sbjct:  128 DQKRKLWLTQNPDFPSFINGKAKVLLLTGSPPKPCDNPIGDHYLLKSVKNKIDYCRIHGIEIVYNMAHLDKELAGYWAKLPMIRRLMLSHPEIEWIWWMDSDALFTDMVFEIPLSRYENHNLVIHGYPDLLFDQKSWIALNTGSFLFRNCQWSLDLLDAWAPMGPKGPIREEAGKILTANLKGRPAFEADDQSALIYLLLSQKETWMEKVFVENQYYLHGFWEGLVDK 355          
BLAST of FC930460 vs. ExPASy Swiss-Prot
Match: GT4_ARATH (Putative glycosyltransferase 4 OS=Arabidopsis thaliana GN=GT4 PE=2 SV=1)

HSP 1 Score: 339.732 bits (870), Expect = 8.450e-93
Identity = 144/228 (63.16%), Postives = 194/228 (85.09%), Query Frame = 1
Query:    1 DAQRAQWLNENPDFANFINKKPRVLLVTGSSPKACENPVGDHYLLKSIKNKIDYCRVHGLEIFYSTALLDAEMAGFWAKLPLIRNLLLGHPEVEFLWWMDSDAMFTDMTFEVPWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGKVRDDAGKKLTKELKDRPAFEADDQSAMVYSLATERDKWGDKVYLESEYYLHVNWAILVDR 684
            D+QR  WLN+NP+F N +N K R+LL+TGSSP  C+ P+G++YLLK++KNKIDYCR+HG+EI Y+ A LD E++G+W KLP+IR L+L HPEVE++WWMDSDA+FTD+ FE+P  RY+++NLV+HG+ +++++QK+W+ LNTG FLLRNCQWSLD+LDAWAPMGPKGK+RD+ GK LT  LK RPAFEADDQSA++Y L ++++KW +KVY+E++YYLH  W  LVDR
Sbjct:  187 DSQRKVWLNQNPEFPNIVNGKARILLLTGSSPGPCDKPIGNYYLLKAVKNKIDYCRLHGIEIVYNMANLDEELSGYWTKLPMIRTLMLSHPEVEWIWWMDSDALFTDILFEIPLPRYENHNLVIHGYPDLLFNQKSWVALNTGIFLLRNCQWSLDLLDAWAPMGPKGKIRDETGKILTAYLKGRPAFEADDQSALIYLLLSQKEKWIEKVYVENQYYLHGFWEGLVDR 414          
BLAST of FC930460 vs. ExPASy Swiss-Prot
Match: GMGT1_CYATE (Galactomannan galactosyltransferase 1 OS=Cyamopsis tetragonoloba GN=GMGT1 PE=1 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 1.774e-66
Identity = 111/227 (48.90%), Postives = 158/227 (69.60%), Query Frame = 1
Query:    1 DAQRAQWLNENPDFANFINKKPRVLLVTGSSPKACENPVGDHYLLKSIKNKIDYCRVHGLEIFYSTALLDAEMAGFWAKLPLIRNLLLGHPEVEFLWWMDSDAMFTDMTFEVPWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGKVRDDAGKKLTKELKDRPAFEADDQSAMVYSLATE-RDKWGDKVYLESEYYLHVNWAILV 678
            D +R +WL  +P F      K  +LLVTGS PK C NP+GDH LL+  KNK+DYCR+H  +I Y+ ALL  +M  +WAK P+IR  ++ HPEVE++WW+DSDA+FTDM F++P +RYK++NLV+HGW  +V    +W GLN G FL+RNCQWSL+ +D W  MGP+    +  G++L +  KD+   ++DDQ+A+ Y +AT+ +D W +K++LESEYY    W  +V
Sbjct:   99 DEKRKEWLLHHPSFGAAARDK--ILLVTGSQPKRCHNPIGDHLLLRFFKNKVDYCRLHNYDIIYNNALLHPKMNSYWAKYPVIRAAMMAHPEVEWVWWVDSDAVFTDMEFKLPLKRYKNHNLVVHGWEGLVRLNHSWTGLNAGVFLIRNCQWSLEFMDVWVSMGPQTPEYEKWGERLRETFKDKVLPDSDDQTALAYLIATDNKDTWREKIFLESEYYFEGYWLEIV 323          
BLAST of FC930460 vs. ExPASy Swiss-Prot
Match: GT7_ARATH (Putative glycosyltransferase 7 OS=Arabidopsis thaliana GN=GT7 PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 3.132e-63
Identity = 104/226 (46.02%), Postives = 151/226 (66.81%), Query Frame = 1
Query:    1 DAQRAQWLNENPDFANFINKKPRVLLVTGSSPKACENPVGDHYLLKSIKNKIDYCRVHGLEIFYSTALLDAEMAGFWAKLPLIRNLLLGHPEVEFLWWMDSDAMFTDMTFEVPWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGKVRDDAGKKLTKELKDRPAFEADDQSAMVYSLATERDKWGDKVYLESEYYLHVNWAILV 678
            D +R +WLN +P F      + R ++VTGS    C+NP+GDH LL+  KNK+DYCR+HG +IFYS ALL  +M  +WAKLP ++  ++ HPE E++WW+DSDA+FTDM F  PW RYK++NLV+HGW  ++Y+ ++W  LN G FL+RNCQWS++++D W  MGP        G+      KD+   E+DDQ+A++Y L   R+ +  K+YLE ++Y    W  +V
Sbjct:  104 DEKRRRWLNLHPSFIP--GAENRTVMVTGSQSAPCKNPIGDHLLLRFFKNKVDYCRIHGHDIFYSNALLHPKMNSYWAKLPAVKAAMIAHPEAEWIWWVDSDALFTDMDFTPPWRRYKEHNLVVHGWPGVIYNDRSWTALNAGVFLIRNCQWSMELIDTWTGMGPVSPEYAKWGQIQRSIFKDKLFPESDDQTALLYLLYKHREVYYPKIYLEGDFYFEGYWLEIV 327          
BLAST of FC930460 vs. ExPASy Swiss-Prot
Match: GT6_ARATH (Glycosyltransferase 6 OS=Arabidopsis thaliana GN=GT6 PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.463e-62
Identity = 102/222 (45.95%), Postives = 149/222 (67.12%), Query Frame = 1
Query:    1 DAQRAQWLNENPDFANFINKKPRVLLVTGSSPKACENPVGDHYLLKSIKNKIDYCRVHGLEIFYSTALLDAEMAGFWAKLPLIRNLLLGHPEVEFLWWMDSDAMFTDMTFEVPWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGKVRDDAGKKLTKELKDRPAFEADDQSAMVYSLATERDKWGDKVYLESEYYLHVNW 666
            D +R QW   +P F      + R+++VTGS    C+NP+GDH LL+  KNK+DY R+HG +IFYS +LL  +M  +WAKLP+++  +L HPE E++WW+DSDA+FTDM F+ P  RY+ +NLV+HGW  ++Y++++W  LN G FL+RNCQWS+D++D W  MGP        G       KD+   E+DDQ+A++Y L   ++ +  K+YLE+EYYL   W
Sbjct:   87 DEKRNQWFESHPSFKP--GSENRIVMVTGSQSSPCKNPIGDHLLLRCFKNKVDYARIHGHDIFYSNSLLHPKMNSYWAKLPVVKAAMLAHPEAEWIWWVDSDAIFTDMEFKPPLHRYRQHNLVVHGWPNIIYEKQSWTALNAGVFLIRNCQWSMDLIDTWKSMGPVSPDYKKWGPIQRSIFKDKLFPESDDQTALIYLLYKHKELYYPKIYLEAEYYLQGYW 306          
The following BLAST results are available for this feature:
BLAST of FC930460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
XT1_ARATH8.391e-11784.28Xyloglucan 6-xylosyltransferase OS=Arabidopsis tha... [more]
GT2_ARATH6.014e-11582.97Putative glycosyltransferase 2 OS=Arabidopsis thal... [more]
GT5_ARATH1.819e-9565.79Putative glycosyltransferase 5 OS=Arabidopsis thal... [more]
GT3_ARATH4.052e-9564.91Putative glycosyltransferase 3 OS=Arabidopsis thal... [more]
GT4_ARATH8.450e-9363.16Putative glycosyltransferase 4 OS=Arabidopsis thal... [more]
GMGT1_CYATE1.774e-6648.90Galactomannan galactosyltransferase 1 OS=Cyamopsis... [more]
GT7_ARATH3.132e-6346.02Putative glycosyltransferase 7 OS=Arabidopsis thal... [more]
GT6_ARATH3.463e-6245.95Glycosyltransferase 6 OS=Arabidopsis thaliana GN=G... [more]
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Properties
Property NameValue
Genbank descriptionC34007G09EF PostHarvC1 Citrus clementina cDNA clone C34007G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930460 ID=FC930460; Name=FC930460; organism=Citrus clementina; type=EST; length=685bp
GATGCGCAAAGAGCACAGTGGCTAAATGAAAACCCTGATTTCGCCAATTT
TATAAACAAGAAGCCACGTGTGCTACTGGTGACAGGATCGTCGCCGAAAG
CGTGTGAGAATCCGGTAGGTGATCATTATTTGTTGAAATCGATTAAAAAC
AAGATTGATTATTGTAGAGTGCACGGATTAGAGATATTTTACAGCACGGC
TCTTCTAGATGCTGAAATGGCAGGCTTTTGGGCGAAGCTTCCGTTGATAA
GAAACTTGTTATTGGGTCATCCGGAGGTGGAGTTTTTATGGTGGATGGAC
AGTGATGCTATGTTTACTGATATGACATTTGAGGTGCCATGGGAGAGGTA
TAAAGATTACAATTTAGTTATGCACGGATGGAATGAGATGGTTTATGATC
AAAAGAACTGGATTGGATTGAATACTGGGAGTTTTCTGTTGAGGAATTGT
CAGTGGTCGTTGGATATCCTTGATGCATGGGCTCCGATGGGACCAAAAGG
GAAAGTTAGGGATGATGCAGGGAAGAAATTGACAAAGGAGCTTAAGGATA
GGCCGGCTTTTGAAGCAGATGATCAGTCCGCAATGGTTTACTCGTTGGCA
ACTGAGAGGGATAAGTGGGGTGATAAGGTTTATCTTGAGAGTGAATATTA
TTTGCATGTTAATTGGGCTATTTTAGTTGATAGGT
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