FC930474
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930474 vs. ExPASy Swiss-Prot
Match: EXOS5_HUMAN (Exosome complex exonuclease RRP46 OS=Homo sapiens GN=EXOSC5 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.139e-16 Identity = 45/120 (37.50%), Postives = 71/120 (59.17%), Query Frame = 2 Query: 191 EMEVDRADGRNPN----QLRPLACSCSILHRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPRTGQIGKPEKEYEIILKRTLQSICILTINPNTTTSVIIQVVHDDGAV 538 ++ + G +P LR AC ++L R GSAS+ QGDT VLA VYGP E KA++EVI +P+ G G EK E +++ T +++ + T++P T+ +V++QVV D G++ Sbjct: 10 KIRAENGTGSSPRGPGCSLRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKVSKEIFNKATLEVILRPKIGLPGVAEKSRERLIRNTCEAVVLGTLHPRTSITVVLQVVSDAGSL 129
BLAST of FC930474 vs. ExPASy Swiss-Prot
Match: EXOS5_MOUSE (Exosome complex exonuclease RRP46 OS=Mus musculus GN=Exosc5 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.276e-15 Identity = 42/102 (41.18%), Postives = 64/102 (62.75%), Query Frame = 2 Query: 233 LRPLACSCSILHRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKASIEVIWKPRTGQIGKPEKEYEIILKRTLQSICILTINPNTTTSVIIQVVHDDGAV 538 LR AC ++L R GSAS+ QGDT VLA VYGP E KA++EVI +P+ G G EK E +++ T +++ + ++P T+ +V++QVV D G++ Sbjct: 28 LRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKVSKEIFNKATLEVILRPKIGLPGVAEKSRERLVRNTCEAVVLGALHPRTSITVVLQVVSDAGSL 129 The following BLAST results are available for this feature:
BLAST of FC930474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930474 ID=FC930474; Name=FC930474; organism=Citrus clementina; type=EST; length=678bpback to top |