FC930504

Overview
NameFC930504
Unique NameFC930504
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC930504 vs. ExPASy Swiss-Prot
Match: FBL14_ARATH (F-box/LRR-repeat protein 14 OS=Arabidopsis thaliana GN=FBL14 PE=2 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 3.635e-70
Identity = 124/180 (68.89%), Postives = 150/180 (83.33%), Query Frame = 2 
Query:  161 EMDTLPDHLVWEILGRIKKTVDRNSASLACKRFYEVDNEQRLSLRVGCGLDPVNEALTSLCNRFGNLTKVEISYAGWMSRLGKQLDDQGLLILSNSCPYLTDLTLNYCTFITDVGLCYLASCLNLSTLKLKFTTRITGCGILSVVVGCKNLTILHLIRCLNVNSVEWLEYLGKLERLEDL 700
            +MD LPDHLVW+IL ++  T DRNS SL+CKRF+ +DNEQR SLR+GCGL P ++AL SLC RF NL+KVEI Y+GWMS+LGKQ+DDQGLL+L+ +C  LTDLTL++CTFITDVG+ +L+SC  LS+LKL F  RITGCG+LS+ VGCK L  LHLIRCLNV SVEWLEY GKLE LE+L
Sbjct:   13 QMDELPDHLVWDILSKLHTTDDRNSLSLSCKRFFSLDNEQRYSLRIGCGLVPASDALLSLCRRFPNLSKVEIIYSGWMSKLGKQVDDQGLLVLTTNCHSLTDLTLSFCTFITDVGIGHLSSCPELSSLKLNFAPRITGCGVLSLAVGCKKLRRLHLIRCLNVASVEWLEYFGKLETLEEL 192
The following BLAST results are available for this feature:
BLAST of FC930504 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FBL14_ARATH3.635e-7068.89F-box/LRR-repeat protein 14 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionC34008C05EF PostHarvC1 Citrus clementina cDNA clone C34008C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930504 ID=FC930504; Name=FC930504; organism=Citrus clementina; type=EST; length=705bp
GAGCAATATATTGTGTCATCATCTTTACATTCCAATCGTCAACAAACAAA
CCAAAATATTGGCATAAGTTGGAATTATTGCCTCAGCACCAGCCAATTCT
TGCTGATCCACTTCGTTGCAGGAGATTAGATTGTGGTGAGGCAAGAAGAA
ATATCTAGTCGAGATGGATACGTTACCAGACCATTTGGTTTGGGAGATTT
TGGGCAGGATTAAGAAAACTGTGGACAGGAACTCGGCTTCATTGGCATGT
AAACGTTTTTATGAAGTGGATAATGAACAGAGGCTTTCTCTTCGGGTGGG
CTGTGGATTAGACCCTGTGAATGAAGCATTGACTTCCCTCTGCAACAGAT
TTGGCAACTTAACCAAAGTAGAAATATCTTATGCTGGTTGGATGTCTAGG
TTGGGTAAACAATTGGATGATCAGGGGCTTTTGATTCTTTCTAACAGCTG
TCCTTATCTGACCGATCTCACCTTAAACTACTGCACTTTTATCACTGATG
TGGGTCTTTGTTACTTGGCTTCTTGCTTAAATCTTTCAACATTGAAGTTG
AAATTCACCACGAGAATCACCGGTTGTGGAATATTATCTGTTGTTGTTGG
TTGCAAGAATCTCACAATTCTTCACCTTATCCGATGTCTTAATGTTAATA
GCGTTGAATGGCTAGAATATCTTGGCAAGCTTGAAAGGCTTGAGGATCTC
TTGAT
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