FC930505

Overview
NameFC930505
Unique NameFC930505
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930505 vs. ExPASy Swiss-Prot
Match: RFS2_ARATH (Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana GN=RFS2 PE=2 SV=2)

HSP 1 Score: 367.081 bits (941), Expect = 5.478e-101
Identity = 174/240 (72.50%), Postives = 206/240 (85.83%), Query Frame = 2
Query:   11 NFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCPLKEISSNISFAAIGLLDMFNSGGAVENVDV-RMAEKKPELFDGEVSSELTSSLSDNRSPTATISLKVRGCGRFGIYSSQRPSECTVGSIQTDFTYDSATGL 727
            NFDLLRKLVLPDGSVLRA+LPGRPTRDCLFADPARDG SLLK+WN+NK +G+VGVFNCQGAGWCK TKK +IHD SPGTLT S+R  D + ++Q+AG  W+GD+IVYA+RSGEVVRLPKGAS+P+TLKVLEYELFH  PLKEI+ NISFA IGL+DMFNS GA+E++D+  + +K PE FDGE+SS  + +LSDNRSPTA +S+ VRGCGRFG YSSQRP +C V S +TDFTYD+  GL
Sbjct:  514 NFDLLRKLVLPDGSVLRAKLPGRPTRDCLFADPARDGISLLKIWNMNKFTGIVGVFNCQGAGWCKETKKNQIHDTSPGTLTGSIRADDADLISQVAGEDWSGDSIVYAYRSGEVVRLPKGASIPLTLKVLEYELFHISPLKEITENISFAPIGLVDMFNSSGAIESIDINHVTDKNPEFFDGEISS-ASPALSDNRSPTALVSVSVRGCGRFGAYSSQRPLKCAVESTETDFTYDAEVGL 752          
BLAST of FC930505 vs. ExPASy Swiss-Prot
Match: RFS1_ARATH (Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis thaliana GN=RFS1 PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 1.045e-59
Identity = 115/240 (47.92%), Postives = 152/240 (63.33%), Query Frame = 2
Query:   11 NFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCPLKEISSNISFAAIGLLDMFNSGGAVENVDVRMAEKKPELFDGEVSSELTSSLSDNRSPTATISLKVRGCGRFGIYSS-QRPSECTVGSIQTDFTYDSATGL 727
            +F+LLRKLVL DGS+LRA+LPGRPT DC F+DP RD  SLLK+WN+N+ +GV+GVFNCQGAGWCK  K+  IHD+ PGT++  VR  DV  + ++A   W GD+IVY+H  GE+V LPK  S+PVTL   EYE+F   P+KE S    FA +GL++MFNSGGA+                        S   D+      + +K+RG G  G+YSS +RP   TV S   ++ Y+  +GL
Sbjct:  518 DFNLLRKLVLRDGSILRAKLPGRPTSDCFFSDPVRDNKSLLKIWNLNEFTGVIGVFNCQGAGWCKNEKRYLIHDQEPGTISGCVRTNDVHYLHKVAAFEWTGDSIVYSHLRGELVYLPKDTSLPVTLMPREYEVFTVVPVKEFSDGSKFAPVGLMEMFNSGGAI-----------------------VSLRYDDEGTKFVVRMKLRGSGLVGVYSSVRRPRSVTVDSDDVEYRYEPESGL 734          
BLAST of FC930505 vs. ExPASy Swiss-Prot
Match: RFS6_ARATH (Probable galactinol--sucrose galactosyltransferase 6 OS=Arabidopsis thaliana GN=RFS6 PE=2 SV=2)

HSP 1 Score: 227.639 bits (579), Expect = 5.187e-59
Identity = 111/241 (46.06%), Postives = 154/241 (63.90%), Query Frame = 2
Query:   11 NFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIA--GAGWNGDAIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCPLKEISSNISFAAIGLLDMFNSGGAVENVDVRMAEKKPELFDGEVSSELTSSLSDNRSPTATISLKVRGCGRFGIYSSQRPSECTVGSIQTDFTYDSATGL 727
            NF+LLRKLVLPDGS+LRA+LPGRPTRDCLFADPARDG SLLK+WN+NK +GV+GV+NCQGA W    +K   H     +LT S+R  DV ++++ +     WNGD  VY+   GE++ +P   S+PV+LK+ E+E+F   P+  +   +SFA IGL++M+NSGGA+E +     + K                         + ++V+GCG+FG YSS +P  C V S +  F YDS++GL
Sbjct:  512 NFELLRKLVLPDGSILRARLPGRPTRDCLFADPARDGVSLLKIWNMNKYTGVLGVYNCQGAAWSSTERKNIFHQTKTDSLTGSIRGRDVHSISEASTDPTTWNGDCAVYSQSRGELIVMPYNVSLPVSLKIREHEIFTVSPISHLVDGVSFAPIGLVNMYNSGGAIEGLRYEAEKMK-------------------------VVMEVKGCGKFGSYSSVKPKRCVVESNEIAFEYDSSSGL 727          
BLAST of FC930505 vs. ExPASy Swiss-Prot
Match: RFS_ORYSJ (Galactinol--sucrose galactosyltransferase OS=Oryza sativa subsp. japonica GN=RFS PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.345e-35
Identity = 92/237 (38.82%), Postives = 125/237 (52.74%), Query Frame = 2
Query:   11 NFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCPLKEISS---NISFAAIGLLDMFNSGGAVENVDVRMAEKKPELFDGEVSSELTSSLSDNRSPTATISLKVRGCGRFGIYSSQRPSECTVGSIQTDFTYD 712
            +FDLLR+L LPDG++LR +    PTRDCLFADP  DG ++LK+WNVNK SGV+G FNCQG GW +  ++          +TA     DVE      G G      VY   + ++  L +  SV +TL+   YEL    P++ I S    I FA IGL +M N+GGAV+  +   A +K    DG+V++E+                 V+G G    YSS RP  C V     +F Y+
Sbjct:  549 DFDLLRRLALPDGTILRCERYALPTRDCLFADPLHDGKTMLKIWNVNKFSGVLGAFNCQGGGWSREARRNMCAAGFSVPVTARASPADVE---WSHGGGGGDRFAVYFVEARKLQLLRRDESVELTLEPFTYELLVVAPVRAIVSPELGIGFAPIGLANMLNAGGAVQGFE---AARK----DGDVAAEVA----------------VKGAGEMVAYSSARPRLCKVNGQDAEFKYE 759          
BLAST of FC930505 vs. ExPASy Swiss-Prot
Match: RFS_PEA (Galactinol--sucrose galactosyltransferase OS=Pisum sativum GN=RFS PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.592e-34
Identity = 82/237 (34.60%), Postives = 123/237 (51.90%), Query Frame = 2
Query:   11 NFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAGAGWNGDAI--VYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCPLKEISSN-ISFAAIGLLDMFNSGGAVENVDVRMAEKKPELFDGEVSSELTSSLSDNRSPTATISLKVRGCGRFGIYSSQRPSECTVGSIQTDFTYD 712
            NF LL+  VLPDGS+LR Q    PTRDCLF DP  +G ++LK+WN+NK +GV+G+FNCQG GWC  T++ +   E    +T      D+E           G  +  VY  +  ++  +     + V+L+   +EL    PLK  S   I FA IGL++M NSGGAV++++          FD   S                + + VRGCG   +++S++P  C +  +  +F Y+
Sbjct:  564 NFKLLKSFVLPDGSILRCQHYALPTRDCLFEDPLHNGKTMLKIWNLNKYAGVLGLFNCQGGGWCPETRRNKSASEFSHAVTCYASPEDIEWCNGKTPMDIKGVDVFAVYFFKEKKLSLMKCSDRLEVSLEPFSFELMTVSPLKVFSKRLIQFAPIGLVNMLNSGGAVQSLE----------FDDSAS---------------LVKIGVRGCGELSVFASEKPVCCKIDGVSVEFDYE 775          
BLAST of FC930505 vs. ExPASy Swiss-Prot
Match: RFS5_ARATH (Probable galactinol--sucrose galactosyltransferase 5 OS=Arabidopsis thaliana GN=RFS5 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.405e-32
Identity = 79/240 (32.92%), Postives = 131/240 (54.58%), Query Frame = 2
Query:   11 NFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVE---NMAQIAGAGWNGDAIVYAHRSGEVVRLPKGASVPVTLKVLEYELFHFCPLKEISSN-ISFAAIGLLDMFNSGGAVENVDVRMAEKKPELFDGEVSSELTSSLSDNRSPTATISLKVRGCGRFGIYSSQRPSECTVGSIQTDFTYDSA 718
            +FDLL++LVLP+GS+LR +    PTRD LF DP  DG ++LK+WN+NK +GV+G FNCQG GWC+ T++ +   E   TLTA+    DVE     + I+ A     A+ +  +S +++       + +TL+  ++EL    P+  I  N + FA IGL++M N+ GA+ ++          +++ E                 ++ + V G G F +Y+S++P  C +     +F Y+ +
Sbjct:  551 DFDLLKRLVLPNGSILRCEYYALPTRDRLFEDPLHDGKTMLKIWNLNKYTGVIGAFNCQGGGWCRETRRNQCFSECVNTLTATTSPKDVEWNSGSSPISIANVEEFAL-FLSQSKKLLLSGLNDDLELTLEPFKFELITVSPVVTIEGNSVRFAPIGLVNMLNTSGAIRSL----------VYNDE-----------------SVEVGVFGAGEFRVYASKKPVSCLIDGEVVEFGYEDS 762          
BLAST of FC930505 vs. ExPASy Swiss-Prot
Match: STSYN_PEA (Stachyose synthase OS=Pisum sativum GN=STS1 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.805e-31
Identity = 80/236 (33.90%), Postives = 125/236 (52.97%), Query Frame = 2
Query:   11 NFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVE--NMAQIAGAGWNGDAIVYAHRSGEVVRLP-KGASVPVTLKVLEYELFHFCPLKEISSNISFAAIGLLDMFNSGGAVENVDVRMAEKKPELFDGEVSSELTSSLSDNRSPTATISLKVRGCGRFGIYSSQRPSECTVGSIQTDFTY 709
            +FDL++KLV PDG++ +      PTRDCLF +P  D T++LK+WN NK  GV+G FNCQGAGW  I +K R   E    +  +V VT+VE     + +  G   + +VY +++ E+  +  K   +  T++   +EL+ F P+ ++   I FA IGL +MFNSGG V +++          + G  +                  +KV+G G F  YSS+ P +  +   + DF +
Sbjct:  619 DFDLIKKLVFPDGTIPKCIYFPLPTRDCLFKNPLFDHTTVLKIWNFNKYGGVIGAFNCQGAGWDPIMQKFRGFPECYKPIPGTVHVTEVEWDQKEETSHLGKAEEYVVYLNQAEELSLMTLKSEPIQFTIQPSTFELYSFVPVTKLCGGIKFAPIGLTNMFNSGGTVIDLE----------YVGNGA-----------------KIKVKGGGSFLAYSSESPKKFQLNGCEVDFEW 827          
BLAST of FC930505 vs. ExPASy Swiss-Prot
Match: RFS4_ARATH (Probable galactinol--sucrose galactosyltransferase 4 OS=Arabidopsis thaliana GN=RFS4 PE=2 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.331e-30
Identity = 82/244 (33.61%), Postives = 129/244 (52.87%), Query Frame = 2
Query:   11 NFDLLRKLVLPDGSVLRAQLPGRPTRDCLFADPARDGTSLLKVWNVNKCSGVVGVFNCQGAGWCKITKKTRIHDESPGTLTASVRVTDVENMAQIAGAG----WNGDAIVYAHRSGEVVRL-PKGASVPVTLKVLEYELFHFCPLKE-ISSNISFAAIGLLDMFNSGGAVENVDVRMAEKKPELFDGEVSSELTSSLSDNRSPTATISLKVRGCGRFGIYSSQRPSECTVGSIQTDFTYDSATG 724
            NFDL++KL   DG++ R      PTRD LF +P  D  S+LK++N NK  GV+G FNCQGAGW     + + + E   T++ +V V+D+E       AG    + GD +VY  +S E++ +  K  ++ +TL+   ++L  F P+ E +SS + F  +GL++MFN  G V+++ V                       DN     +I + V+G GRF  YSS  P +C +   + +F ++  TG
Sbjct:  637 NFDLIKKLAFFDGTIPRCVHYALPTRDSLFKNPLFDKESILKIFNFNKFGGVIGTFNCQGAGWSPEEHRFKGYKECYTTVSGTVHVSDIEWDQNPEAAGSQVTYTGDYLVYKQQSEEILFMNSKSEAMKITLEPSAFDLLSFVPVTELVSSGVRFVPLGLINMFNCVGTVQDMKV---------------------TGDN-----SIRVDVKGEGRFMAYSSSAPVKCYLNDKEAEFKWEEETG 854          
The following BLAST results are available for this feature:
BLAST of FC930505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
RFS2_ARATH5.478e-10172.50Probable galactinol--sucrose galactosyltransferase... [more]
RFS1_ARATH1.045e-5947.92Probable galactinol--sucrose galactosyltransferase... [more]
RFS6_ARATH5.187e-5946.06Probable galactinol--sucrose galactosyltransferase... [more]
RFS_ORYSJ2.345e-3538.82Galactinol--sucrose galactosyltransferase OS=Oryza... [more]
RFS_PEA2.592e-3434.60Galactinol--sucrose galactosyltransferase OS=Pisum... [more]
RFS5_ARATH5.405e-3232.92Probable galactinol--sucrose galactosyltransferase... [more]
STSYN_PEA7.805e-3133.90Stachyose synthase OS=Pisum sativum GN=STS1 PE=1 S... [more]
RFS4_ARATH1.331e-3033.61Probable galactinol--sucrose galactosyltransferase... [more]
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Properties
Property NameValue
Genbank descriptionC34008C07EF PostHarvC1 Citrus clementina cDNA clone C34008C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930505 ID=FC930505; Name=FC930505; organism=Citrus clementina; type=EST; length=727bp
CGGGTAACCCAATTTCGACCTGTTGAGGAAGCTGGTACTTCCTGATGGAT
CAGTTCTTCGTGCCCAACTGCCTGGCAGGCCTACACGTGATTGTCTCTTT
GCTGATCCTGCCCGAGATGGGACTAGCTTGCTCAAGGTATGGAATGTGAA
CAAATGCTCTGGTGTTGTTGGTGTGTTCAACTGTCAAGGTGCTGGTTGGT
GCAAGATTACCAAGAAAACCCGCATTCATGATGAATCTCCCGGTACCCTC
ACAGCATCTGTTCGTGTAACTGATGTTGAAAATATGGCTCAGATTGCTGG
TGCCGGCTGGAATGGGGATGCAATTGTTTATGCCCATAGATCAGGTGAGG
TTGTGCGGTTGCCCAAAGGTGCTTCAGTGCCAGTAACACTTAAGGTTCTT
GAATATGAGCTATTCCATTTCTGCCCGCTGAAGGAGATCTCTTCAAACAT
TTCATTTGCAGCAATAGGCTTGCTCGACATGTTCAACAGTGGAGGTGCTG
TCGAGAATGTGGATGTGCGTATGGCTGAGAAGAAGCCAGAGCTCTTTGAT
GGCGAAGTATCTTCCGAACTGACCTCCTCCCTCAGTGACAACCGATCTCC
AACCGCCACAATCTCTCTCAAAGTTAGGGGATGTGGAAGGTTTGGCATTT
ACTCTTCCCAGCGTCCCTCTGAATGCACCGTGGGCAGCATCCAGACCGAC
TTCACCTACGATTCTGCAACCGGCTTG
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