FC930517
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930517 vs. ExPASy Swiss-Prot
Match: TT12_ARATH (Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.693e-25 Identity = 59/180 (32.78%), Postives = 100/180 (55.56%), Query Frame = 3 Query: 180 IAAPMVAVTLSQYLLQVVSMMMVGHLGQLALSSTAMAISLASVTGFSVLLGMASALETLCGQAYGAQQYQRIGTQTYTAIFCLFLVCFPLSFLWIYAGKLLVLIGQDPLISHEVGKFMIWLLPALFAYATMQPLIRYFQSQSLIIPMFLSSCAALCLHIPICWSLVYKSGLGNLGGALAI 719 ++ + V++ Y+L V++M GHLG L L+ ++A + ++LGMASA++T+CGQAYGA+QY +G A+ L+FL+ Y+G +L +GQ I+HE F ++P ++A+A P+ R+ Q+Q+++ P+ S LH + W + G LG AL + Sbjct: 58 LSGASIVVSVLNYMLSFVTVMFTGHLGSLQLAGASIATVGIQGLAYGIMLGMASAVQTVCGQAYGARQYSSMGIICQRAMVLHLAAAVFLTFLYWYSGPILKTMGQSVAIAHEGQIFARGMIPQIYAFALACPMQRFLQAQNIVNPLAYMSLGVFLLHTLLTWLVTNVLDFGLLGAALIL 237
BLAST of FC930517 vs. ExPASy Swiss-Prot
Match: S47A2_MOUSE (Multidrug and toxin extrusion protein 2 OS=Mus musculus GN=Slc47a2 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.228e-25 Identity = 65/195 (33.33%), Postives = 110/195 (56.41%), Query Frame = 3 Query: 144 GVLSGEVKKQGY----IAAPMVAVTLSQYLLQVVSMMMVGHLGQLALSSTAMAISLASVTGFSVLLGMASALETLCGQAYGAQQYQRIGTQTYTAIFCLFLVCFPLSFLWIYAGKLLVLIGQDPLISHEVGKFMIWLLPALFAYATMQPLIRYFQSQSLIIPMFLSSCAALCLHIPICWSLVYKSGLGNLGGALA 716 G LS +V+++ +A P+ L +L+ +VS + GHLG++ L + +A+S+ +VTG SV G+ASA +TL Q++G + +R+G I L L CFP +++ +LL+L+ QDP ++ +++ +PAL A Q RY QSQ +I+P + AA +++ + L+Y LG +G A A Sbjct: 34 GALSPDVRREAAALVALAGPVFLAQLMIFLISIVSSIFCGHLGKVELDAVTLAVSVVNVTGISVGTGLASACDTLMSQSFGGKNLKRVGVILQRGILILLLCCFPCWAIFLNTERLLLLLRQDPDVARLAQVYVMICIPALPAAFLFQLQTRYLQSQGIIMPQVIVGIAANVVNVGMNAFLLYALDLGVVGSAWA 228
BLAST of FC930517 vs. ExPASy Swiss-Prot
Match: S47A1_XENTR (Multidrug and toxin extrusion protein 1 OS=Xenopus tropicalis GN=slc47a1 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.992e-22 Identity = 61/179 (34.08%), Postives = 95/179 (53.07%), Query Frame = 3 Query: 180 IAAPMVAVTLSQYLLQVVSMMMVGHLGQLALSSTAMAISLASVTGFSVLLGMASALETLCGQAYGAQQYQRIGTQTYTAIFCLFLVCFPLSFLWIYAGKLLVLIGQDPLISHEVGKFMIWLLPALFAYATMQPLIRYFQSQSLIIPMFLSSCAALCLHIPICWSLVYKSGLGNLGGALA 716 +AAP L +L+ +VS + GHLG++ L + ++AI++ ++TG +V G+A A +TL Q +G + +G I L L CFP L I +L+L QDP +S +++ LPAL A Q L +Y Q+Q +I P L+ A + + L+Y GLG +G A A Sbjct: 55 LAAPAFLSQLMIFLISIVSSIFCGHLGKVELDAVSLAITIINITGVAVGTGLAGACDTLISQTFGGSNLKLVGIILQRGILILLLFCFPCWALLINTESILLLFRQDPEVSKLTQIYVLIFLPALPAAFLYQLLAKYLQNQGIIYPQVLTGFIANIFNALFNYILLYVLGLGVMGSACA 233
BLAST of FC930517 vs. ExPASy Swiss-Prot
Match: YL47_SCHPO (Uncharacterized transporter C323.07c OS=Schizosaccharomyces pombe GN=SPAC323.07c PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.515e-22 Identity = 57/206 (27.67%), Postives = 113/206 (54.85%), Query Frame = 3 Query: 108 PKESLSSSSTTWGVLSGEVKKQGYIAAPMVAVTLSQYLLQVVSMMMVGHLGQLALSSTAMAISLASVTGFSVLLGMASALETLCGQAYGAQQYQRIGTQTYTAIFCLFLVCFPLSFLWIYAGKLLVLIGQDPLISHEVGKFMIWLLPALFAYATMQPLIRYFQSQSLIIPMFLSSCAALCLHIPICWSLVYKS--GLGNLGGALAI 719 P ES + +++ + V+ E+ + + +P V L Q Q ++ +GHLG+ L++++++ A+++ FS+ G+ S+L+TL QA+GA + + + L ++ P++ +W+ +L+ + QDP+++H G++M + A YA + L RY Q+Q + P+ C A L+I + + LV+ G G LG +A+ Sbjct: 73 PGESFADNASGYPVIKHELSELLRLGSPTVIAYLLQSSEQFSTVFTLGHLGKEYLAASSLSTMTAAISAFSIFQGVISSLDTLATQAFGANKPYNVAIYLQRCLLILAVLHIPVALIWLNLEHILIFLHQDPMVAHLCGRYMRVFILAAPGYAVFEALKRYLQAQGIFTPITYVLCFAAPLNILLNYLLVWHPTIGFGFLGAPVAV 278
BLAST of FC930517 vs. ExPASy Swiss-Prot
Match: S47A1_MOUSE (Multidrug and toxin extrusion protein 1 OS=Mus musculus GN=Slc47a1 PE=1 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 8.515e-22 Identity = 57/179 (31.84%), Postives = 96/179 (53.63%), Query Frame = 3 Query: 180 IAAPMVAVTLSQYLLQVVSMMMVGHLGQLALSSTAMAISLASVTGFSVLLGMASALETLCGQAYGAQQYQRIGTQTYTAIFCLFLVCFPLSFLWIYAGKLLVLIGQDPLISHEVGKFMIWLLPALFAYATMQPLIRYFQSQSLIIPMFLSSCAALCLHIPICWSLVYKSGLGNLGGALA 716 +A P L +L+ +S + GHLG+L L + +AI++ +VTG SV G++SA +TL Q YG+Q + +G L L CFP L+I ++L+L QDP +S +++ +PAL A ++Y +Q +++P ++ AA ++ + +Y LG +G ALA Sbjct: 41 LAGPAFLAQLMMFLISFISSVFCGHLGKLELDAVTLAIAVINVTGISVGHGLSSACDTLISQTYGSQNLKHVGVILQRGTLILLLCCFPCWALFINTEQILLLFRQDPDVSRLTQTYVMIFIPALPAAFLYTLQVKYLLNQGIVLPQIMTGIAANLVNALANYVFLYHLHLGVMGSALA 219
BLAST of FC930517 vs. ExPASy Swiss-Prot
Match: S47A1_RAT (Multidrug and toxin extrusion protein 1 OS=Rattus norvegicus GN=Slc47a1 PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.897e-21 Identity = 60/193 (31.09%), Postives = 104/193 (53.89%), Query Frame = 3 Query: 147 VLSG---EVKKQGYIAAPMVAVTLSQYLLQVVSMMMVGHLGQLALSSTAMAISLASVTGFSVLLGMASALETLCGQAYGAQQYQRIGTQTYTAIFCLFLVCFPLSFLWIYAGKLLVLIGQDPLISHEVGKFMIWLLPALFAYATMQPLIRYFQSQSLIIPMFLSSCAALCLHIPICWSLVYKSGLGNLGGALA 716 +LSG E++ +A P L +L+ +S + GHLG+L L + +AI++ +VTG SV G++SA +TL Q YG+Q + +G L L CFP L+I ++L+L QDP +S +++ +PAL A ++Y +Q +++P ++ AA ++ + +++ LG +G ALA Sbjct: 26 LLSGFQEELRALLVLAGPAFLAQLMMFLISFISSVFCGHLGKLELDAVTLAIAVINVTGISVGHGLSSACDTLISQTYGSQNLKHVGVILQRGTLILLLCCFPCWALFINTEQILLLFRQDPDVSRLTQTYVMVFIPALPAAFLYTLQVKYLLNQGIVLPQVITGIAANLVNALANYLFLHQLHLGVMGSALA 218
BLAST of FC930517 vs. ExPASy Swiss-Prot
Match: S47A1_PONAB (Multidrug and toxin extrusion protein 1 OS=Pongo abelii GN=SLC47A1 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.897e-21 Identity = 56/179 (31.28%), Postives = 97/179 (54.19%), Query Frame = 3 Query: 180 IAAPMVAVTLSQYLLQVVSMMMVGHLGQLALSSTAMAISLASVTGFSVLLGMASALETLCGQAYGAQQYQRIGTQTYTAIFCLFLVCFPLSFLWIYAGKLLVLIGQDPLISHEVGKFMIWLLPALFAYATMQPLIRYFQSQSLIIPMFLSSCAALCLHIPICWSLVYKSGLGNLGGALA 716 +A P V L +L+ +S + GHLG+L L + +AI++ +VTG SV G++SA +TL Q YG+Q + +G + L L CFP L++ +L+L QDP +S ++ +PAL A ++Y +Q +++P ++ AA ++ + +++ LG +G ALA Sbjct: 41 LAGPAFLVQLMVFLISFISSVFCGHLGKLELDAVTLAIAVINVTGVSVGFGLSSACDTLISQTYGSQNLKHVGVILQRSALILLLCCFPCWALFLNTQHILLLFRQDPDVSRLTQTYVTIFIPALPATFLYMLQVKYLLNQGIVLPQIVTGVAANLVNALANYLFLHQLHLGAIGSALA 219
BLAST of FC930517 vs. ExPASy Swiss-Prot
Match: S47A1_HUMAN (Multidrug and toxin extrusion protein 1 OS=Homo sapiens GN=SLC47A1 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.477e-21 Identity = 56/179 (31.28%), Postives = 97/179 (54.19%), Query Frame = 3 Query: 180 IAAPMVAVTLSQYLLQVVSMMMVGHLGQLALSSTAMAISLASVTGFSVLLGMASALETLCGQAYGAQQYQRIGTQTYTAIFCLFLVCFPLSFLWIYAGKLLVLIGQDPLISHEVGKFMIWLLPALFAYATMQPLIRYFQSQSLIIPMFLSSCAALCLHIPICWSLVYKSGLGNLGGALA 716 +A P V L +L+ +S + GHLG+L L + +AI++ +VTG SV G++SA +TL Q YG+Q + +G + L L CFP L++ +L+L QDP +S ++ +PAL A ++Y +Q +++P ++ AA ++ + +++ LG +G ALA Sbjct: 41 LAGPAFLVQLMVFLISFISSVFCGHLGKLELDAVTLAIAVINVTGVSVGFGLSSACDTLISQTYGSQNLKHVGVILQRSALVLLLCCFPCWALFLNTQHILLLFRQDPDVSRLTQTYVTIFIPALPATFLYMLQVKYLLNQGIVLPQIVTGVAANLVNALANYLFLHQLHLGVIGSALA 219
BLAST of FC930517 vs. ExPASy Swiss-Prot
Match: S47A1_RABIT (Multidrug and toxin extrusion protein 1 OS=Oryctolagus cuniculus GN=SLC47A1 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.319e-19 Identity = 54/179 (30.17%), Postives = 93/179 (51.96%), Query Frame = 3 Query: 180 IAAPMVAVTLSQYLLQVVSMMMVGHLGQLALSSTAMAISLASVTGFSVLLGMASALETLCGQAYGAQQYQRIGTQTYTAIFCLFLVCFPLSFLWIYAGKLLVLIGQDPLISHEVGKFMIWLLPALFAYATMQPLIRYFQSQSLIIPMFLSSCAALCLHIPICWSLVYKSGLGNLGGALA 716 +A P L +L+ VS + GHL +L L++ +AI++ +V G SV G++SA +TL Q YG++ + +G L L C P L++ +L+L QDP +S ++ +PAL A ++Y +Q +++P ++ AA ++ + VY+ LG +G ALA Sbjct: 40 LACPAFLAQLMVFLISFVSSVFCGHLSKLELNAVTLAIAVINVMGVSVGFGLSSACDTLISQTYGSRNLKHVGVILQRGSLILLLCCLPCWALFLNTQHILLLFRQDPAVSRLTQTYVTIFIPALPATFLYTLQVKYLLNQGIVLPQVVTGVAANLVNALANYLFVYQLHLGVMGSALA 218
BLAST of FC930517 vs. ExPASy Swiss-Prot
Match: S47A1_DANRE (Multidrug and toxin extrusion protein 1 OS=Danio rerio GN=slc47a1 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.811e-19 Identity = 58/179 (32.40%), Postives = 92/179 (51.40%), Query Frame = 3 Query: 180 IAAPMVAVTLSQYLLQVVSMMMVGHLGQLALSSTAMAISLASVTGFSVLLGMASALETLCGQAYGAQQYQRIGTQTYTAIFCLFLVCFPLSFLWIYAGKLLVLIGQDPLISHEVGKFMIWLLPALFAYATMQPLIRYFQSQSLIIPMFLSSCAALCLHIPICWSLVYKSGLGNLGGALA 716 +A P+ L +L+ VS + GHLG+ L+ A+AI++ +VTG S+ G+ASA +TL Q +G+ +R+G I L L CFP L I +L+ + Q P ++ ++ +PAL A Q RY Q+Q +I P ++ A L+ I + ++ LG G A A Sbjct: 59 LAGPVFISQLMIFLISFVSTVFCGHLGKTELAGVALAIAVINVTGISIGSGLASACDTLISQTFGSNNLKRVGVILQRGILILLLACFPCWALLINTEPILLAVRQSPNVASLSQLYVKIFMPALPAAFMYQLQGRYLQNQGIIWPQVITGAAGNILNALINYVFLHLLELGVAGSAAA 237 The following BLAST results are available for this feature:
BLAST of FC930517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930517 ID=FC930517; Name=FC930517; organism=Citrus clementina; type=EST; length=722bpback to top |