FC930523

Overview
NameFC930523
Unique NameFC930523
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10237 contig Ccv1_Contig10237:10..718. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930523 vs. ExPASy Swiss-Prot
Match: OPR2_ARATH (12-oxophytodienoate reductase 2 OS=Arabidopsis thaliana GN=OPR2 PE=2 SV=2)

HSP 1 Score: 327.791 bits (839), Expect = 3.554e-89
Identity = 154/192 (80.21%), Postives = 171/192 (89.06%), Query Frame = 2
Query:  134 IPLVTPYNMGSLNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQDYQPNGQAPISCTDKPLTPQIRTNGVDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLN*QFMKGSVNDR 709
            +PL+TPY MG  NLSHRVVLAPLTRQ+SY +VPQPHAILYYSQRT+ GG LIAEATGVSDTAQGYPDTPGIWTKE VEAWKPIVDAVHAKGGIFFCQI HVGRVSN+ +QP  QAPISCT KP+ PQ+R NG+D A+FTPPRRL+ +EIP IVNDFRLAARNA+EAGFDG+E+HGAHG+L  QFMK  VNDR
Sbjct:   12 VPLLTPYKMGRFNLSHRVVLAPLTRQKSYGSVPQPHAILYYSQRTSPGGFLIAEATGVSDTAQGYPDTPGIWTKEHVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNRGFQPRRQAPISCTGKPIMPQMRANGIDEARFTPPRRLSIEEIPGIVNDFRLAARNAMEAGFDGVEIHGAHGYLIDQFMKDKVNDR 203          
BLAST of FC930523 vs. ExPASy Swiss-Prot
Match: OPR1_ARATH (12-oxophytodienoate reductase 1 OS=Arabidopsis thaliana GN=OPR1 PE=1 SV=2)

HSP 1 Score: 327.405 bits (838), Expect = 4.642e-89
Identity = 155/192 (80.73%), Postives = 170/192 (88.54%), Query Frame = 2
Query:  134 IPLVTPYNMGSLNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQDYQPNGQAPISCTDKPLTPQIRTNGVDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLN*QFMKGSVNDR 709
            +PL+TPY MG  NLSHRVVLAPLTRQRSY NVPQPHA +YYSQRTT GG LI EATGVSDTAQGY DTPGIWTKE VEAWKPIVDAVHAKGGIFFCQI HVGRVSN  +QPNG+APISC+DKPL PQIR+NG+D A FTPPRRL  +EIP IVNDFRLAARNA+EAGFDG+E+HGA+G+L  QFMK +VNDR
Sbjct:   10 VPLLTPYKMGRFNLSHRVVLAPLTRQRSYGNVPQPHAAIYYSQRTTPGGFLITEATGVSDTAQGYQDTPGIWTKEHVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNSGFQPNGKAPISCSDKPLMPQIRSNGIDEALFTPPRRLGIEEIPGIVNDFRLAARNAMEAGFDGVEIHGANGYLIDQFMKDTVNDR 201          
BLAST of FC930523 vs. ExPASy Swiss-Prot
Match: OPR1_SOLLC (12-oxophytodienoate reductase 1 OS=Solanum lycopersicum GN=OPR1 PE=1 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 6.273e-86
Identity = 150/192 (78.12%), Postives = 168/192 (87.50%), Query Frame = 2
Query:  134 IPLVTPYNMGSLNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQDYQPNGQAPISCTDKPLTPQIRTNGVDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLN*QFMKGSVNDR 709
            IPL++P  MG   L HRVVLAPLTRQRSY  +PQPHAIL+YSQR+T GGLLI EAT +S+T  GY D PGIWTKEQVEAWKPIVDAVHAKGGIFFCQI HVGRVSN+D+QPNG+ PISCTD+ LTPQIR+NG+DIA FT PRRLTTDEIPQIVN+FR+AARNAIEAGFDG+E+HGAHG+L  QFMK  VNDR
Sbjct:   14 IPLMSPCKMGKFELCHRVVLAPLTRQRSYGYIPQPHAILHYSQRSTNGGLLIGEATVISETGIGYKDVPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIWHVGRVSNKDFQPNGEDPISCTDRGLTPQIRSNGIDIAHFTRPRRLTTDEIPQIVNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDR 205          
BLAST of FC930523 vs. ExPASy Swiss-Prot
Match: OPRL2_ARATH (Putative 12-oxophytodienoate reductase-like protein 2 OS=Arabidopsis thaliana GN=At1g17990 PE=2 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 2.093e-73
Identity = 134/192 (69.79%), Postives = 157/192 (81.77%), Query Frame = 2
Query:  134 IPLVTPYNMGSLNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQDYQPNGQAPISCTDKPLTPQIRTNGVDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLN*QFMKGSVNDR 709
            IPL+ PY MG  NLSHRVVLAPLTR RSY N+PQP+A LYY+QRTT GGLLI+E+  VS+T+ GYPD PG+W ++QVEAWKPIVDAVH+KGGIFFCQI H GRV +QD QPNG+AP+S TDKPL  +    G    QF PPRRL +DE+P IVNDFR+AARNAIEAGFDG+E+HGAHG+L  QF+K  VNDR
Sbjct:    7 IPLLMPYKMGPFNLSHRVVLAPLTRSRSYGNIPQPNAKLYYTQRTTPGGLLISESCVVSETSLGYPDLPGLWNRDQVEAWKPIVDAVHSKGGIFFCQIWHGGRVFHQD-QPNGEAPVSSTDKPLMCKNMYGG----QFKPPRRLRSDELPAIVNDFRIAARNAIEAGFDGVEVHGAHGYLIDQFLKDKVNDR 193          
BLAST of FC930523 vs. ExPASy Swiss-Prot
Match: OPRL1_ARATH (Putative 12-oxophytodienoate reductase-like protein 1 OS=Arabidopsis thaliana GN=At1g09400 PE=2 SV=2)

HSP 1 Score: 266.929 bits (681), Expect = 7.445e-71
Identity = 125/184 (67.93%), Postives = 146/184 (79.35%), Query Frame = 2
Query:  158 MGSLNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQDYQPNGQAPISCTDKPLTPQIRTNGVDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLN*QFMKGSVNDR 709
            M + NL+HR+V+AP+ R RSY N+PQPH  LYY QRTT GGLLI+EATGVS+TA  Y + PGIW KEQ+EAWKPIVDAVH+ GGIFFCQ+ H GRVS+QD QPNG++P+S TDKP             +FTPPRRL TDEIP I+NDFRLAARNA EAGFDG+E+HGAHG+L  QFMK SVNDR
Sbjct:    1 MKNFNLTHRIVMAPMARMRSYGNIPQPHVALYYCQRTTPGGLLISEATGVSETAMAYQNMPGIWRKEQIEAWKPIVDAVHSHGGIFFCQLWHAGRVSHQDCQPNGESPVSSTDKPFADDPSN------EFTPPRRLRTDEIPTIINDFRLAARNATEAGFDGVEIHGAHGYLIDQFMKDSVNDR 178          
BLAST of FC930523 vs. ExPASy Swiss-Prot
Match: OPR3_SOLLC (12-oxophytodienoate reductase 3 OS=Solanum lycopersicum GN=OPR3 PE=1 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.610e-57
Identity = 111/197 (56.35%), Postives = 138/197 (70.05%), Query Frame = 2
Query:  137 PLVTPYNMGSLNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQDYQPNGQAPISCTDKPLTPQIR------TNGVDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLN*QFMKGSVNDR 709
            PL +PY MG  NLSHRVVLAP+TR R+ NN+PQ     YY QR T GG LI E T +S T+ G+P  PGI+TKEQV  WK IVD VHAKG + FCQ+ HVGR S++ YQP G APIS T+KP++ + R      T+G+    +  PR + T EI Q+V D+R +A NAIEAGFDGIE+HGAHG+L  QF+K  +NDR
Sbjct:   11 PLFSPYKMGKFNLSHRVVLAPMTRCRALNNIPQAALGEYYEQRATAGGFLITEGTMISPTSAGFPHVPGIFTKEQVREWKKIVDVVHAKGAVIFCQLWHVGRASHEVYQPAGAAPISSTEKPISNRWRILMPDGTHGI----YPKPRAIGTYEISQVVEDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDR 203          
BLAST of FC930523 vs. ExPASy Swiss-Prot
Match: OPR3_ARATH (12-oxophytodienoate reductase 3 OS=Arabidopsis thaliana GN=OPR3 PE=1 SV=2)

HSP 1 Score: 210.69 bits (535), Expect = 6.332e-54
Identity = 105/194 (54.12%), Postives = 136/194 (70.10%), Query Frame = 2
Query:  140 LVTPYNMGSLNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQDYQPNGQAPISCTDKPLTPQ----IRTNGVDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLN*QFMKGSVNDR 709
            L + Y MG  +LSHRVVLAP+TR R+ N VP      YY+QRTT GG LI+E T VS  + G+P  PGI++ EQVEAWK +V+AVHAKGG  FCQ+ HVGR S+  YQPNG +PIS T+KP++      +  +G  + ++  PR L   EIP++V D+ L+A NAI AGFDGIE+HGAHG+L  QF+K  +NDR
Sbjct:   12 LFSSYKMGRFDLSHRVVLAPMTRCRALNGVPNAALAEYYAQRTTPGGFLISEGTMVSPGSAGFPHVPGIYSDEQVEAWKQVVEAVHAKGGFIFCQLWHVGRASHAVYQPNGGSPISSTNKPISENRWRVLLPDGSHV-KYPKPRALEASEIPRVVEDYCLSALNAIRAGFDGIEIHGAHGYLIDQFLKDGINDR 204          
BLAST of FC930523 vs. ExPASy Swiss-Prot
Match: OPRL_SOLLC (12-oxophytodienoate reductase-like protein OS=Solanum lycopersicum GN=OPR2 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 7.758e-44
Identity = 95/192 (49.48%), Postives = 121/192 (63.02%), Query Frame = 2
Query:  134 IPLVTPYNMGSLNLSHRVVLAPLTRQRSYNNVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQDYQPNGQAPISCTDKPLTPQIRTNGVDIAQFTP-PRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAH-GFLN*QFMKGSVN 703
            +PL TPY +G   L+HR+V   LTR RS NN PQ H   YYSQR T GGL+I+EA   SD ++  P+ PGIW +EQVEAWKP+V+ VH KGG+FFCQI H GR+S           +S     +     T   D     P P  L +D+IP IVNDFR+AARNAI+AGFDGIE++ +  G+L  +FM   V+
Sbjct:    9 VPLCTPYKLGRFKLTHRIVFPALTRNRSQNNTPQSHLTEYYSQRATNGGLIISEAAAASDISKECPNLPGIWNEEQVEAWKPVVNGVHEKGGVFFCQIWHSGRLS--------VPTVSALFFSIGIGWSTRPDDKVYAKPTPLPLESDKIPCIVNDFRIAARNAIKAGFDGIEINASSGGYLIDEFMNDQVH 192          
BLAST of FC930523 vs. ExPASy Swiss-Prot
Match: NEMA_ECOLI (N-ethylmaleimide reductase OS=Escherichia coli (strain K12) GN=nemA PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.559e-36
Identity = 89/198 (44.95%), Postives = 119/198 (60.10%), Query Frame = 2
Query:  140 LVTPYNMGSLNLSHRVVLAPLTRQRSYN--NVPQPHAILYYSQRTTKGGLLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQDYQPNGQAPISCTDKPLTPQIRT-----NGVDI-AQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLN*QFMKGSVNDR 709
            L +P  +G++  ++R+ +APLTR RS    ++P P    YY QR +  GL+I+EAT +S  A+GY   PGI + EQ+ AWK I   VHA+ G    Q+ H GR+S+   QP GQAP++     L+   RT     NG  I  + + PR L  +EIP IVNDFR A  NA EAGFD +ELH AHG+L  QF+  S N R
Sbjct:    6 LYSPLKVGAITAANRIFMAPLTRLRSIEPGDIPTPLMAEYYRQRAS-AGLIISEATQISAQAKGYAGAPGIHSPEQIAAWKKITAGVHAENGHMAVQLWHTGRISHASLQPGGQAPVA--PSALSAGTRTSLRDENGQAIRVETSMPRALELEEIPGIVNDFRQAIANAREAGFDLVELHSAHGYLLHQFLSPSSNHR 200          
BLAST of FC930523 vs. ExPASy Swiss-Prot
Match: OYE3_YEAST (NADPH dehydrogenase 3 OS=Saccharomyces cerevisiae GN=OYE3 PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 5.780e-23
Identity = 68/196 (34.69%), Postives = 99/196 (50.51%), Query Frame = 2
Query:  140 LVTPYNMGSLNLSHRVVLAPLTRQRSYN--NVPQPH-AILYYSQRTTKGG-LLIAEATGVSDTAQGYPDTPGIWTKEQVEAWKPIVDAVHAKGGIFFCQIGHVGRVSNQDYQPNGQAPISCTDKP--LTPQIRTNGVDIAQFTPPRRLTTDEIPQIVNDFRLAARNAIEAGFDGIELHGAHGFLN*QFMKGSVNDR 709
            L  P  +G+  L+HR V+ PLTR R+ +  N+P    A +YY QR  + G ++I E T +S  A GY + PGIW+ EQV  WK I  A+H      + Q+  +G  S  D          C      +   ++    D         LT D+I Q + D+  AA+N+I AG DG+E+H A+G+L  QF+    N R
Sbjct:   17 LFEPIKIGNTQLAHRAVMPPLTRMRATHPGNIPNKEWAAVYYGQRAQRPGTMIITEGTFISPQAGGYDNAPGIWSDEQVAEWKNIFLAIHDCQSFAWVQLWSLGWASFPDVLARDGLRYDCASDRVYMNATLQEKAKDANNL--EHSLTKDDIKQYIKDYIHAAKNSIAAGADGVEIHSANGYLLNQFLDPHSNKR 210          
The following BLAST results are available for this feature:
BLAST of FC930523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
OPR2_ARATH3.554e-8980.2112-oxophytodienoate reductase 2 OS=Arabidopsis tha... [more]
OPR1_ARATH4.642e-8980.7312-oxophytodienoate reductase 1 OS=Arabidopsis tha... [more]
OPR1_SOLLC6.273e-8678.1312-oxophytodienoate reductase 1 OS=Solanum lycoper... [more]
OPRL2_ARATH2.093e-7369.79Putative 12-oxophytodienoate reductase-like protei... [more]
OPRL1_ARATH7.445e-7167.93Putative 12-oxophytodienoate reductase-like protei... [more]
OPR3_SOLLC1.610e-5756.3512-oxophytodienoate reductase 3 OS=Solanum lycoper... [more]
OPR3_ARATH6.332e-5454.1212-oxophytodienoate reductase 3 OS=Arabidopsis tha... [more]
OPRL_SOLLC7.758e-4449.4812-oxophytodienoate reductase-like protein OS=Sola... [more]
NEMA_ECOLI4.559e-3644.95N-ethylmaleimide reductase OS=Escherichia coli (st... [more]
OYE3_YEAST5.780e-2334.69NADPH dehydrogenase 3 OS=Saccharomyces cerevisiae ... [more]

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Properties
Property NameValue
Genbank descriptionC34008E01EF PostHarvC1 Citrus clementina cDNA clone C34008E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930523 ID=FC930523; Name=FC930523; organism=Citrus clementina; type=EST; length=709bp
AATCATTTTATTTTCAGTCGCGTTAAGGATTCTCAATTTGCTTGTAATTC
TACTAAACATGGGAAACAGAGCAGAGGAGGCTAAGCAAAATCAAGAAGAG
AACAACGGTAACATGGCCATTGAAACTCCCATCATCCCTCTTGTCACTCC
TTACAATATGGGCAGTCTCAATCTTTCTCATAGAGTTGTTTTAGCACCAC
TGACTAGACAGAGATCATACAACAATGTTCCTCAGCCACATGCCATTTTG
TATTACTCTCAAAGAACCACCAAAGGGGGTTTGCTTATAGCCGAAGCCAC
TGGAGTTTCCGACACTGCTCAAGGGTATCCAGATACACCTGGTATCTGGA
CAAAGGAGCAAGTTGAAGCATGGAAACCGATTGTAGATGCTGTTCATGCC
AAAGGTGGGATCTTCTTTTGTCAGATTGGGCACGTTGGCAGGGTTTCAAA
TCAAGATTATCAGCCAAATGGTCAAGCTCCAATTTCCTGTACAGACAAGC
CATTGACACCTCAAATCCGCACTAATGGTGTTGATATTGCACAATTCACT
CCTCCAAGGCGGCTAACGACAGATGAAATCCCTCAAATTGTGAATGATTT
CAGGCTTGCTGCAAGAAATGCAATTGAGGCTGGTTTCGATGGCATTGAGC
TCCACGGTGCACATGGCTTCCTAAATTGACAATTTATGAAAGGATCAGTG
AATGATCGA
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