FC930589

Overview
NameFC930589
Unique NameFC930589
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length732
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: AFC2_ARATH (Serine/threonine-protein kinase AFC2 OS=Arabidopsis thaliana GN=AFC2 PE=1 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 6.147e-76
Identity = 134/207 (64.73%), Postives = 165/207 (79.71%), Query Frame = 3
Query:  111 MEMDYVTGFAHSHMDRRPTKRPRLAWENPQAHSKAQSGMYCGQELGNLTSFGPSRVHADHAS-MFVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSHCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            MEM+ V  F H+HMDRRP KR RL W+     +KAQ GM+CGQE+GN++SF  S   +D++S + VKG+A+NG+P WR DDKDGHY+F LG++LT RYKI  K+GEGTFGQVL+C DRE  E VA+K+VR +KKYREAAM EI++L+ L ++D+ G+ CVQIRNWFDYRNHICIVFE LG SLYDFLRK  YR FP+DLVREIG QL
Sbjct:    1 MEMERVHEFPHTHMDRRPRKRARLGWDVLPQATKAQVGMFCGQEIGNISSFASSGAPSDNSSSLCVKGVARNGSPPWREDDKDGHYIFELGDDLTPRYKIYSKMGEGTFGQVLECWDRERKEMVAVKIVRGVKKYREAAMIEIEMLQQLGKHDKGGNRCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSFPIDLVREIGWQL 207          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: AFC1_ARATH (Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2)

HSP 1 Score: 242.276 bits (617), Expect = 2.051e-63
Identity = 122/205 (59.51%), Postives = 145/205 (70.73%), Query Frame = 3
Query:  135 FAHSHMDRRPTKRPRLAWEN-------PQAHSKAQSGMYCGQELGNLTSFGPSRVHADHASMFVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSHCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            F H  +D+RP KRPRL W+        P   +  Q  +Y G E  +     P+ V+ +   MF  GL + G+P WR DDKDGHY+F +G+ LT RY+IL K+GEGTFGQVL+C D +  E VAIKV+RSI KYREAAM EIDVL+ L R+D  GS CVQIRNWFDYRNHICIVFE LGPSLYDFLRK  YR FP+DLVRE+GRQL
Sbjct:   25 FPHRIVDKRPRKRPRLTWDAAPPLLPPPPPPTVFQPPLYYGPEFAS--GLVPNFVYPN---MFYNGLPRQGSPPWRPDDKDGHYVFVVGDTLTPRYQILSKMGEGTFGQVLECFDNKNKEVVAIKVIRSINKYREAAMIEIDVLQRLTRHDVGGSRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQL 224          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: AFC3_ARATH (Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana GN=AFC3 PE=2 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 2.875e-49
Identity = 100/197 (50.76%), Postives = 132/197 (67.01%), Query Frame = 3
Query:  150 MDR-RPTKRPRLAWENPQAHSKAQSGMYCGQELGNLTSFGPSRVHADHASMFVKGLAQNG---TPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSHCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            MD+ R  KRPR+ W+   A  +A+  +                         +KG   +G   +P  R+DD+DGHY+F+L +NLT RYKIL K+GEGTFG+VL+C DR+T E VAIK++RSIKKYR+AAM EIDVL+ L + D+  + CVQ++NWFDYRNHICIVFE LGPSL+DFL++  Y  FP+ LVR+ G QL
Sbjct:    9 MDKERVRKRPRMTWDEAPAEPEAKRAV-------------------------IKGHGSDGRILSPPLRDDDRDGHYVFSLRDNLTPRYKILSKMGEGTFGRVLECWDRDTKEYVAIKIIRSIKKYRDAAMIEIDVLQKLVKSDKGRTRCVQMKNWFDYRNHICIVFEKLGPSLFDFLKRNKYSAFPLALVRDFGCQL 180          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: DOA_DROME (Serine/threonine-protein kinase Doa OS=Drosophila melanogaster GN=Doa PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.342e-30
Identity = 62/129 (48.06%), Postives = 90/129 (69.77%), Query Frame = 3
Query:  345 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSH-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            DD DGH ++  G+ L  RYKI+  +GEGTFG+V+   D E    +A+K++++++KYREAA  EI+ LE + + D    H CV++ +WFDY  H+CIVFEMLG S++DFLR+  Y P+P+D VR +  QL
Sbjct:  461 DDADGHLIYHTGDILHHRYKIMATLGEGTFGRVVKVKDMERDYCMALKIIKNVEKYREAAKLEINALEKIAQKDPHCDHLCVKMIDWFDYHGHMCIVFEMLGLSVFDFLRENNYEPYPLDQVRHMAYQL 589          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: CLK2_HUMAN (Dual specificity protein kinase CLK2 OS=Homo sapiens GN=CLK2 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.316e-29
Identity = 64/155 (41.29%), Postives = 98/155 (63.23%), Query Frame = 3
Query:  270 SRVHADHASMFVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLD-RETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSH-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            SR  + H+S   K +          DD +GH ++ +G+ L  RY+I+  +GEGTFG+V+ C+D R  G  VA+K++++++KY+EAA  EI+VLE +   D    + CVQ+ +WFDY  H+CI FE+LG S +DFL+   Y P+P+  VR +  QL
Sbjct:  129 SRSSSQHSSRRAKSV---------EDDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQL 274          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: LKH1_SCHPO (Dual specificity protein kinase lkh1 OS=Schizosaccharomyces pombe GN=lkh1 PE=1 SV=3)

HSP 1 Score: 126.331 bits (316), Expect = 1.640e-28
Identity = 57/129 (44.19%), Postives = 86/129 (66.67%), Query Frame = 3
Query:  345 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSH-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            DD DGHY         +RY ++R +G GTFG+V+ C D+ TG   AIKV R+I KYREA++ E+ VL+ +   D +  + C+Q+R++FDYR HICIV ++ G S++DFL+   Y PFP+  ++ + +QL
Sbjct:  344 DDDDGHYKVVPNSKFANRYTVVRLLGHGTFGKVIQCYDQSTGRHCAIKVTRAIPKYREASLIELRVLQTIAHSDPTNENKCIQLRDYFDYRKHICIVTDLFGWSVFDFLKNNNYIPFPLKHIQMLSQQL 472          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: CLK3_RAT (Dual specificity protein kinase CLK3 OS=Rattus norvegicus GN=Clk3 PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 3.654e-28
Identity = 56/130 (43.08%), Postives = 93/130 (71.54%), Query Frame = 3
Query:  345 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSH-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            DDK+GH +  +G+ L  RY+I+  +GEGTFG+V++CLD   G++ VA+K++R++ KYREAA  EI+VL+ +K  D+     CV + +WF++  H+CI FE+LG + ++FL++  ++P+P+  VR +  QL
Sbjct:  138 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQL 267          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: CLK3_MOUSE (Dual specificity protein kinase CLK3 OS=Mus musculus GN=Clk3 PE=1 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 3.654e-28
Identity = 56/130 (43.08%), Postives = 93/130 (71.54%), Query Frame = 3
Query:  345 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSH-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            DDK+GH +  +G+ L  RY+I+  +GEGTFG+V++CLD   G++ VA+K++R++ KYREAA  EI+VL+ +K  D+     CV + +WF++  H+CI FE+LG + ++FL++  ++P+P+  VR +  QL
Sbjct:  286 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQL 415          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: CLK3_HUMAN (Dual specificity protein kinase CLK3 OS=Homo sapiens GN=CLK3 PE=1 SV=3)

HSP 1 Score: 125.176 bits (313), Expect = 3.654e-28
Identity = 56/130 (43.08%), Postives = 93/130 (71.54%), Query Frame = 3
Query:  345 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSH-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            DDK+GH +  +G+ L  RY+I+  +GEGTFG+V++CLD   G++ VA+K++R++ KYREAA  EI+VL+ +K  D+     CV + +WF++  H+CI FE+LG + ++FL++  ++P+P+  VR +  QL
Sbjct:  286 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQL 415          
BLAST of FC930589 vs. ExPASy Swiss-Prot
Match: CLK3_BOVIN (Dual specificity protein kinase CLK3 OS=Bos taurus GN=CLK3 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.654e-28
Identity = 56/130 (43.08%), Postives = 93/130 (71.54%), Query Frame = 3
Query:  345 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSH-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKKYYRPFPVDLVREIGRQL 728
            DDK+GH +  +G+ L  RY+I+  +GEGTFG+V++CLD   G++ VA+K++R++ KYREAA  EI+VL+ +K  D+     CV + +WF++  H+CI FE+LG + ++FL++  ++P+P+  VR +  QL
Sbjct:  138 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQL 267          
The following BLAST results are available for this feature:
BLAST of FC930589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
AFC2_ARATH6.147e-7664.73Serine/threonine-protein kinase AFC2 OS=Arabidopsi... [more]
AFC1_ARATH2.051e-6359.51Serine/threonine-protein kinase AFC1 OS=Arabidopsi... [more]
AFC3_ARATH2.875e-4950.76Serine/threonine-protein kinase AFC3 OS=Arabidopsi... [more]
DOA_DROME1.342e-3048.06Serine/threonine-protein kinase Doa OS=Drosophila ... [more]
CLK2_HUMAN4.316e-2941.29Dual specificity protein kinase CLK2 OS=Homo sapie... [more]
LKH1_SCHPO1.640e-2844.19Dual specificity protein kinase lkh1 OS=Schizosacc... [more]
CLK3_RAT3.654e-2843.08Dual specificity protein kinase CLK3 OS=Rattus nor... [more]
CLK3_MOUSE3.654e-2843.08Dual specificity protein kinase CLK3 OS=Mus muscul... [more]
CLK3_HUMAN3.654e-2843.08Dual specificity protein kinase CLK3 OS=Homo sapie... [more]
CLK3_BOVIN3.654e-2843.08Dual specificity protein kinase CLK3 OS=Bos taurus... [more]

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Properties
Property NameValue
Genbank descriptionC34009B08EF PostHarvC1 Citrus clementina cDNA clone C34009B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930589 ID=FC930589; Name=FC930589; organism=Citrus clementina; type=EST; length=732bp
GAAAGAACAGCGGCCTCACAAGCTTTTGCGACAAGGAAGAAAAATTCAAT
TGATCTCTTCCCGTAATTGATGAATCGATAAGTCAATCTGGGGTTAGGGT
TTTGTATCAGATGGAAATGGACTACGTTACAGGGTTTGCTCACAGTCACA
TGGATCGTCGTCCCACGAAGAGACCTCGATTAGCTTGGGAAAACCCTCAA
GCTCACTCTAAGGCTCAGTCAGGAATGTATTGTGGACAAGAGTTGGGGAA
TCTGACAAGCTTTGGGCCATCAAGGGTACATGCAGACCATGCTAGTATGT
TTGTAAAGGGATTGGCTCAAAATGGCACTCCCCAATGGCGAAATGATGAC
AAAGATGGACATTACCTGTTTGCGCTTGGAGAGAATTTAACTTCTCGCTA
TAAAATCCTCAGAAAAATTGGTGAAGGAACTTTTGGTCAGGTTTTGGATT
GTTTAGATAGGGAAACAGGAGAGACGGTTGCCATAAAAGTTGTGCGAAGT
ATTAAGAAATACCGTGAAGCAGCAATGACAGAAATTGATGTGCTTGAGTT
GCTCAAAAGATATGACAGAAGTGGCAGTCATTGTGTTCAAATAAGGAACT
GGTTTGACTATCGTAACCATATCTGTATCGTGTTTGAGATGCTTGGACCT
AGCCTATACGATTTTCTTCGGAAAAAGTATTATCGCCCATTTCCGGTTGA
TCTTGTCCGTGAGATTGGCAGACAACTGNTGG
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