FC930618

Overview
NameFC930618
Unique NameFC930618
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930618 vs. ExPASy Swiss-Prot
Match: PLDB1_ARATH (Phospholipase D beta 1 OS=Arabidopsis thaliana GN=PLDBETA1 PE=2 SV=3)

HSP 1 Score: 344.354 bits (882), Expect = 1.237e-97
Identity = 164/208 (78.85%), Postives = 186/208 (89.42%), Query Frame = 2
Query:    2 IPMEIALQIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNT-PEALSRKSGRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARMKRHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGE 622
            IPMEIAL+IA+KIRA+ERFAAYIVIPMWPEGVPTGAATQRIL+WQHKT+QMMYETIYKALVE GLEGAFSPQDYLNFFCLGNRE++D  D S +G+P    T    LSRKS RFM+YVHSKGM+VDDEYV++GSANINQRSMEGTRDTEIAMGAYQP++TWAR    P GQIYGYRMSLWAEH+  ++DCF QPE++ECVRKVR++GE
Sbjct:  700 IPMEIALKIAEKIRANERFAAYIVIPMWPEGVPTGAATQRILYWQHKTIQMMYETIYKALVETGLEGAFSPQDYLNFFCLGNREMVDGIDNSGTGSPRQMQTLLRPLSRKSRRFMVYVHSKGMVVDDEYVVIGSANINQRSMEGTRDTEIAMGAYQPQHTWARKHSGPRGQIYGYRMSLWAEHMANLDDCFTQPESIECVRKVRTMGE 907          

HSP 2 Score: 33.8834 bits (76), Expect = 1.237e-97
Identity = 12/22 (54.55%), Postives = 19/22 (86.36%), Query Frame = 1
Query:  628 WQQFAADDQSEMRSHLIKYQLK 693
            W+QFAA++ S+MR HL+KY ++
Sbjct:  910 WKQFAAEEVSDMRGHLLKYPVE 931          
BLAST of FC930618 vs. ExPASy Swiss-Prot
Match: PLDB2_ARATH (Phospholipase D beta 2 OS=Arabidopsis thaliana GN=PLDBETA2 PE=2 SV=2)

HSP 1 Score: 337.035 bits (863), Expect = 3.291e-95
Identity = 159/207 (76.81%), Postives = 182/207 (87.92%), Query Frame = 2
Query:    2 IPMEIALQIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARMKRHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGE 622
            IPMEIAL+IADKIRA ERFAAYIVIPMWPEGVPTGAATQRIL+WQHKTMQMMY TIY ALVE GLE  +SPQDYLNFFCLGNRE+++  + S +G+ +  NTP+ L RKS RFMIYVHSKGM+VDDEYV++GSANINQRSMEGTRDTEIAMGAYQP++TWAR +  P GQIYGYRMSLWAEH+  ++DCF +PE+L CVRKVR+V E
Sbjct:  649 IPMEIALKIADKIRAKERFAAYIVIPMWPEGVPTGAATQRILYWQHKTMQMMYGTIYNALVEAGLEDEYSPQDYLNFFCLGNREMVNGNNESGTGSASNENTPQGLCRKSRRFMIYVHSKGMVVDDEYVVIGSANINQRSMEGTRDTEIAMGAYQPQHTWARRQSGPRGQIYGYRMSLWAEHMALLDDCFVEPESLGCVRKVRTVAE 855          

HSP 2 Score: 33.113 bits (74), Expect = 3.291e-95
Identity = 12/24 (50.00%), Postives = 19/24 (79.17%), Query Frame = 1
Query:  622 EYWQQFAADDQSEMRSHLIKYQLK 693
            E W+QF +++ SEMR HL+KY ++
Sbjct:  856 ENWEQFRSEEVSEMRGHLMKYPVE 879          
BLAST of FC930618 vs. ExPASy Swiss-Prot
Match: PLDG1_ARATH (Phospholipase D gamma 1 OS=Arabidopsis thaliana GN=PLDGAMMA1 PE=1 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 1.259e-82
Identity = 145/214 (67.76%), Postives = 169/214 (78.97%), Query Frame = 2
Query:    2 IPMEIALQIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSR-------KSGRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARMKRHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGE 622
            IPMEIAL+IA+KIRA E+FAAYIVIPMWPEG PT    QRIL+WQHKTMQMMY+TIYKALVEVGL+  F PQD+LNFFCLG REV   T  S+  +P  P  P A +        KS RFMIYVHSKGM+VDDE+V++GSANINQRS+EGTRDTEIAMG YQP Y+WA     P+GQI+GYRMSLWAEHLG++E  F +PE +ECVR+VR + E
Sbjct:  586 IPMEIALKIANKIRAREKFAAYIVIPMWPEGAPTSNPIQRILYWQHKTMQMMYQTIYKALVEVGLDSQFEPQDFLNFFCLGTREVPVGT-VSVYNSPRKPPQPNANANAAQVQALKSRRFMIYVHSKGMVVDDEFVLIGSANINQRSLEGTRDTEIAMGGYQPHYSWAMKGSRPHGQIFGYRMSLWAEHLGFLEQGFEEPENMECVRRVRQLSE 798          

HSP 2 Score: 30.4166 bits (67), Expect = 1.259e-82
Identity = 10/22 (45.45%), Postives = 18/22 (81.82%), Query Frame = 1
Query:  628 WQQFAADDQSEMRSHLIKYQLK 693
            W+Q+AA++ +EM  HL+KY ++
Sbjct:  801 WRQYAAEEVTEMSGHLLKYPVQ 822          
BLAST of FC930618 vs. ExPASy Swiss-Prot
Match: PLDG3_ARATH (Phospholipase D gamma 3 OS=Arabidopsis thaliana GN=PLDGAMMA3 PE=2 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 8.089e-82
Identity = 142/214 (66.36%), Postives = 169/214 (78.97%), Query Frame = 2
Query:    2 IPMEIALQIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREV----IDQTDTSLSGNPTAP---NTPEALSRKSGRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARMKRHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGE 622
            IPMEIAL+IA+KIRA E+FAAYIVIPMWPEG PT    QRIL+WQHKTMQMMY+TIYKALVEVGL+G   PQD+LNFFCLG REV    +     S+  +P  P   N  +  + KS RFMIYVHSKGM+VDDE+V++GSANINQRS+EGTRDTEIAMG YQP ++WA+    P GQI+GYRMSLWAEHLG++E  F +PE +ECVR+VR + E
Sbjct:  593 IPMEIALKIANKIRAREKFAAYIVIPMWPEGAPTSNPIQRILYWQHKTMQMMYQTIYKALVEVGLDGQLEPQDFLNFFCLGTREVGTREVPDGTVSVYNSPRKPPQLNAAQVQALKSRRFMIYVHSKGMVVDDEFVLIGSANINQRSLEGTRDTEIAMGGYQPHHSWAKKGSRPRGQIFGYRMSLWAEHLGFLEQEFEEPENMECVRRVRQLSE 806          

HSP 2 Score: 30.0314 bits (66), Expect = 8.089e-82
Identity = 10/22 (45.45%), Postives = 18/22 (81.82%), Query Frame = 1
Query:  628 WQQFAADDQSEMRSHLIKYQLK 693
            W+Q+AA++ +EM  HL+KY ++
Sbjct:  809 WRQYAAEEVTEMPGHLLKYPVQ 830          
BLAST of FC930618 vs. ExPASy Swiss-Prot
Match: PLDG2_ARATH (Phospholipase D gamma 2 OS=Arabidopsis thaliana GN=PLDGAMMA2 PE=1 SV=3)

HSP 1 Score: 295.819 bits (756), Expect = 1.055e-81
Identity = 142/214 (66.36%), Postives = 168/214 (78.50%), Query Frame = 2
Query:    2 IPMEIALQIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGN-------PTAPNTPEALSRKSGRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARMKRHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGE 622
            IPMEIAL+IA+KIRA E FAAYIVIPMWPEG PT    QRIL+WQHKTMQMMY+TIYKAL+EVGL+G   PQD+LNFFCLGNREV  +     + N       P  PN  +  + KS RFMIYVHSKGM+VDDE+V++GSANINQRS+EGTRDTEIAMG YQP ++WA+    P GQI+GYRMSLWAEHLG++E  F +PE +ECVR+VR + E
Sbjct:  583 IPMEIALKIANKIRARENFAAYIVIPMWPEGAPTSKPIQRILYWQHKTMQMMYQTIYKALLEVGLDGQLEPQDFLNFFCLGNREVGTREVPDGTVNVYNCPRKPPQPNAAQVQALKSRRFMIYVHSKGMVVDDEFVLIGSANINQRSLEGTRDTEIAMGGYQPHHSWAKKGSRPRGQIFGYRMSLWAEHLGFLEQEFEEPENMECVRRVRQLSE 796          

HSP 2 Score: 29.261 bits (64), Expect = 1.055e-81
Identity = 10/22 (45.45%), Postives = 17/22 (77.27%), Query Frame = 1
Query:  628 WQQFAADDQSEMRSHLIKYQLK 693
            W Q+AA++ +EM  HL+KY ++
Sbjct:  799 WGQYAAEEVTEMSGHLLKYPVQ 820          
BLAST of FC930618 vs. ExPASy Swiss-Prot
Match: PLDD1_ARATH (Phospholipase D delta OS=Arabidopsis thaliana GN=PLDDELTA PE=1 SV=2)

HSP 1 Score: 246.514 bits (628), Expect = 3.012e-66
Identity = 122/207 (58.94%), Postives = 147/207 (71.01%), Query Frame = 2
Query:    2 IPMEIALQIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARMKRHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGE 622
            IPME+AL+I  KIRA ERFA Y+VIP+WPEG P     Q IL+WQ +TMQMMY+ I K L  V  +    P DYLNF+CLG RE +     + +G+  +       S    RFMIYVH+KGMIVDDEYV++GSANINQRSM GT+DTEIAMGAYQP +TWA   RHP GQ+YGYRMSLWAEHLG   D F +P  LEC++KV ++ E
Sbjct:  609 IPMELALKIVSKIRAKERFAVYVVIPLWPEGDPKSGPVQEILYWQSQTMQMMYDVIAKELKAVQSDA--HPLDYLNFYCLGKREQLPDDMPATNGSVVSD------SYNFQRFMIYVHAKGMIVDDEYVLMGSANINQRSMAGTKDTEIAMGAYQPNHTWAHKGRHPRGQVYGYRMSLWAEHLGKTGDEFVEPSDLECLKKVNTISE 807          

HSP 2 Score: 26.9498 bits (58), Expect = 3.012e-66
Identity = 11/24 (45.83%), Postives = 16/24 (66.67%), Query Frame = 1
Query:  622 EYWQQFAADDQSEMRSHLIKYQLK 693
            E W++F     SE++ HLIKY L+
Sbjct:  808 ENWKRFIDPKFSELQGHLIKYPLQ 831          
BLAST of FC930618 vs. ExPASy Swiss-Prot
Match: PLDA1_MAIZE (Phospholipase D alpha 1 OS=Zea mays GN=PLD1 PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.543e-60
Identity = 117/207 (56.52%), Postives = 150/207 (72.46%), Query Frame = 2
Query:    2 IPMEIALQIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARMKRHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGE 622
            IP E++L+I  KI A ERF  Y+V+PMWPEGVP  A+ Q IL WQ +TM+MMY  I +AL   G+E   +P+DYL FFCLGNREV  + +     +P  P+T    ++++ RFMIYVH+K MIVDDEY+I+GSANINQRSM+G RD+EIAMGAYQP +   R      GQI+G+RMSLW EHLG +ED F +PE++ECV+KV  V E
Sbjct:  549 IPKELSLKIVSKIEAGERFTVYVVVPMWPEGVPESASVQAILDWQRRTMEMMYTDIAQALEANGIEA--NPKDYLTFFCLGNREVKQEGEYEPEEHPE-PDTDYIRAQEARRFMIYVHTKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAYQPYHLATRQPAR--GQIHGFRMSLWYEHLGMLEDVFQRPESVECVQKVNEVAE 750          
BLAST of FC930618 vs. ExPASy Swiss-Prot
Match: PLDA1_ORYSJ (Phospholipase D alpha 1 OS=Oryza sativa subsp. japonica GN=PLD1 PE=1 SV=2)

HSP 1 Score: 226.868 bits (577), Expect = 8.468e-59
Identity = 113/207 (54.59%), Postives = 147/207 (71.01%), Query Frame = 2
Query:    2 IPMEIALQIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARMKRHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGE 622
            IP E+AL++  KI A ERF  Y+V+PMWPEGVP   + Q IL WQ +TM+MMY  I +AL   G+E   +P+DYL FFCLGNREV    +      P A +T  + ++++ RFMIYVH+K MIVDDEY+I+GSANINQRSM+G RD+EIAMG YQP +   R      GQI+G+RM+LW EHLG ++D F +PE+LECV+KV  + E
Sbjct:  549 IPKELALKVVSKIEAGERFTVYVVVPMWPEGVPESGSVQAILDWQRRTMEMMYTDITEALQAKGIEA--NPKDYLTFFCLGNREVKQAGEYQPEEQPEA-DTDYSRAQEARRFMIYVHTKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGGYQPYHLATRQPAR--GQIHGFRMALWYEHLGMLDDVFQRPESLECVQKVNRIAE 750          
BLAST of FC930618 vs. ExPASy Swiss-Prot
Match: PLDA2_ARATH (Phospholipase D alpha 2 OS=Arabidopsis thaliana GN=PLDALPHA2 PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.445e-58
Identity = 112/207 (54.11%), Postives = 147/207 (71.01%), Query Frame = 2
Query:    2 IPMEIALQIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARMKRHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGE 622
            IP E++L+I  KI+A E+F  Y+V+PMWPEG+P   + Q IL WQ +TM+MMY+ + KAL E GLEG   P+DYL FFCLGNREV    +   S  P  P+T    ++++ RFMIYVH+K MIVDDEY+I+GSANINQRSM+G RD+EIAMG YQP +   R      GQI+G+RMSLW EHLG +++ F  P + EC++KV  V +
Sbjct:  546 IPKELSLKIVSKIKAGEKFKVYVVVPMWPEGIPESGSVQAILDWQKRTMEMMYKDVIKALRENGLEGE-DPRDYLTFFCLGNREVKKDGEYEPSEKP-EPDTDYIRAQEARRFMIYVHTKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGGYQPYHLSTRQPAR--GQIHGFRMSLWYEHLGMLDETFLDPSSQECIQKVNRVAD 748          
BLAST of FC930618 vs. ExPASy Swiss-Prot
Match: PLDA1_RICCO (Phospholipase D alpha 1 OS=Ricinus communis GN=PLD1 PE=1 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 3.558e-57
Identity = 113/207 (54.59%), Postives = 146/207 (70.53%), Query Frame = 2
Query:    2 IPMEIALQIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARMKRHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGE 622
            IP E++L+I  KI A ERF  YIV+PMWPEG+P  A+ Q IL WQ +TM+MMY+ I +AL   G+     P++YL FFCLGNREV    +   +  P  P+T    ++++ RFMIYVH+K MIVDDEY+I+GSANINQRSM+G RD+EIAMGAYQP +   R      GQI+G+RMSLW EHLG +++ F  PE+ ECVRKV  + E
Sbjct:  545 IPKELSLKILSKIAAGERFTVYIVVPMWPEGIPESASVQAILDWQKRTMEMMYKDIVQALKANGI--IEDPRNYLTFFCLGNREVKKSGEYEPAEKPE-PDTDYIRAQEARRFMIYVHTKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAYQPHHLSTRQPAR--GQIHGFRMSLWYEHLGMLDESFLNPESEECVRKVNQMAE 746          
The following BLAST results are available for this feature:
BLAST of FC930618 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
PLDB1_ARATH1.237e-9778.85Phospholipase D beta 1 OS=Arabidopsis thaliana GN=... [more]
PLDB2_ARATH3.291e-9576.81Phospholipase D beta 2 OS=Arabidopsis thaliana GN=... [more]
PLDG1_ARATH1.259e-8267.76Phospholipase D gamma 1 OS=Arabidopsis thaliana GN... [more]
PLDG3_ARATH8.089e-8266.36Phospholipase D gamma 3 OS=Arabidopsis thaliana GN... [more]
PLDG2_ARATH1.055e-8166.36Phospholipase D gamma 2 OS=Arabidopsis thaliana GN... [more]
PLDD1_ARATH3.012e-6658.94Phospholipase D delta OS=Arabidopsis thaliana GN=P... [more]
PLDA1_MAIZE1.543e-6056.52Phospholipase D alpha 1 OS=Zea mays GN=PLD1 PE=2 S... [more]
PLDA1_ORYSJ8.468e-5954.59Phospholipase D alpha 1 OS=Oryza sativa subsp. jap... [more]
PLDA2_ARATH1.445e-5854.11Phospholipase D alpha 2 OS=Arabidopsis thaliana GN... [more]
PLDA1_RICCO3.558e-5754.59Phospholipase D alpha 1 OS=Ricinus communis GN=PLD... [more]

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Properties
Property NameValue
Genbank descriptionC34009E02EF PostHarvC1 Citrus clementina cDNA clone C34009E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930618 ID=FC930618; Name=FC930618; organism=Citrus clementina; type=EST; length=706bp
GATTCCGATGGAAATTGCGCTCCAGATTGCTGATAAGATCAGAGCACATG
AGCGATTTGCTGCCTATATAGTTATTCCAATGTGGCCGGAAGGCGTTCCA
ACTGGTGCTGCTACACAAAGAATTTTATTTTGGCAGCACAAAACTATGCA
AATGATGTATGAGACAATCTACAAGGCATTAGTTGAGGTGGGGCTTGAGG
GTGCATTCTCACCGCAGGACTATTTGAACTTTTTCTGTCTGGGCAATCGT
GAGGTCATTGATCAAACTGACACTTCATTGTCTGGAAATCCAACAGCTCC
GAACACTCCTGAGGCCCTAAGTAGGAAGAGTGGACGATTCATGATTTATG
TTCATTCAAAAGGGATGATTGTTGATGATGAGTATGTGATACTGGGGTCT
GCAAACATCAATCAGCGCTCCATGGAGGGCACAAGAGACACAGAAATTGC
AATGGGAGCCTACCAACCTGAATATACTTGGGCTAGAATGAAACGTCATC
CTTATGGACAGATCTATGGATATAGAATGTCGCTATGGGCAGAACATCTT
GGATACATTGAGGACTGCTTCGGACAACCCGAGACTCTGGAATGTGTAAG
AAAGGTTAGATCAGTAGGCGAGAATACTGGCAGCAGTTTGCTGCAGATGA
TCAATCTGAAATGAGGAGCCACCTTATAAAGTACCAGTTGAAGTGGATCG
AAAAGG
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