FC930634

Overview
NameFC930634
Unique NameFC930634
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length731
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930634 vs. ExPASy Swiss-Prot
Match: DENR_NEUCR (Translation machinery-associated protein 22 OS=Neurospora crassa GN=tma-22 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.314e-24
Identity = 64/176 (36.36%), Postives = 92/176 (52.27%), Query Frame = 3
Query:  111 VLYYAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDL-AEELNSREADKVGEQLQSTGIXXXXXXXXKAEEVKHLPGGXXXXXXXXXXXXXXXXXXXXXCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIEDGKK 635
            V+Y  VCSLP EYCE+G  ++KC+ WL +N P +Y  + + E+   E   +  + Q   +        KAE  +                           +T+V GLE FG++L   +K  GKKFATG+SV K P+  E+I VQGD+S +I EFI + + +VPE  I  +ED KK
Sbjct:    9 VVYCGVCSLPPEYCEYGGTVKKCQQWLEKNQPTMYSRIWSPEVLEAEMASLSVEAQERAMKDAKKKAAKAEAAEQKQADKRANSVVTIKRIERNKRKY---VTSVSGLEAFGLELKKVAKDFGKKFATGSSVTKVPSGGEEIVVQGDVSGEIEEFILEKYKEVPEDNIELVEDKKK 181          
BLAST of FC930634 vs. ExPASy Swiss-Prot
Match: DENR_CHAGB (Translation machinery-associated protein 22 OS=Chaetomium globosum GN=TMA22 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.589e-23
Identity = 71/189 (37.57%), Postives = 98/189 (51.85%), Query Frame = 3
Query:   84 MAEKPQPV--RVLYYAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDL--AEELNSREAD-KVGEQLQSTGIXXXXXXXXKAEEVKHLPGGXXXXXXXXXXXXXXXXXXXXXCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIEDGKK 635
            MAE P PV   ++Y  VC+LP EYCE+G   +KC+ WL +  PDLY  +   E L +  A   +  Q ++           +A E KH                          +T+V GLE FG++L   +K  GKKFATGASV K P+  E+I VQGD+S +I EF+ + + D+PE  I  +ED KK
Sbjct:    1 MAE-PTPVGREIIYCGVCTLPPEYCEYGGTTKKCQEWLEKKHPDLYARIWSPEALEAATASLSLAAQERAAKDAAKKAAKAEAAEQKHAD-----KLAKSVVTIKRIERNKRKFVTSVTGLEAFGLELKKVAKDFGKKFATGASVTKVPSGGEEIVVQGDVSGEIEEFLLEKYKDIPEDNIELVEDKKK 183          
BLAST of FC930634 vs. ExPASy Swiss-Prot
Match: DENR_SCHPO (Translation machinery-associated protein 22 OS=Schizosaccharomyces pombe GN=tma22 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.345e-22
Identity = 66/188 (35.11%), Postives = 94/188 (50.00%), Query Frame = 3
Query:   96 PQPVRVLYYAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYP------DLAEELNSR---EADKVGEQLQSTGIXXXXXXXXKAEEVKHLPGGXXXXXXXXXXXXXXXXXXXXXCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIEDGK 632
            P+   VLY  VC+LP EYCEF   L+KCK WL  + PD+Y       DL+++L +       K     +            + EE K +                         +TTV+GL+ FG++   A+K L  KFATGASV K   +K++I VQGD++YDI +FI + + +VPE  I  +ED K
Sbjct:    7 PKLKSVLYCDVCTLPVEYCEFEGTLKKCKEWLKSSHPDVYDKLYGEQDLSKDLENTLNVSGTKDSNAEEQPAKLTKEEKRVEREEAKRMASKVLIKTIERTKRKR---------VTTVQGLDAFGIETKKAAKMLANKFATGASVTKTADKKDEIVVQGDLNYDIFDFILEKFKEVPEDNIKIVEDTK 185          
BLAST of FC930634 vs. ExPASy Swiss-Prot
Match: DENR_NEOFI (Translation machinery-associated protein 22 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=tma22 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.638e-21
Identity = 61/181 (33.70%), Postives = 91/181 (50.28%), Query Frame = 3
Query:   99 QPVRVLYYAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDL-AEELNSREADKVGEQLQSTGIXXXXXXXXKAEEVKHLPGGXXXXXXXXXXXXXXXXXXXXXCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW-PDVPETAIFFIEDGKK 635
            Q  +V+Y  VC+LP EYCEFG   +KC+ WL  N  DLY  L +EE  S    ++   ++            KA   +                           +T + GLE+ G++    +K+LGKKFATG+SV K P   E+I VQGD+S D+ E++ + +  ++PE+ I  +ED KK
Sbjct:   13 QAKQVVYCGVCTLPPEYCEFGGTAKKCEEWLKDNHADLYQRLYSEEALSSNLSELSVSVRERAAKDAAKKEAKAAAAEARDAERKAAAKVQIKRVERNKRKH---VTVITGLEVHGLENKKVAKELGKKFATGSSVTKSPAGVEEITVQGDVSEDVQEWLLELYGKEIPESNIELVEDKKK 190          
BLAST of FC930634 vs. ExPASy Swiss-Prot
Match: DENR_ASPFU (Translation machinery-associated protein 22 OS=Aspergillus fumigatus GN=tma22 PE=3 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.644e-20
Identity = 62/192 (32.29%), Postives = 95/192 (49.48%), Query Frame = 3
Query:   66 SSVFEVMAEKPQPVRVLYYAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDL-AEELNSREADKVGEQLQSTGIXXXXXXXXKAEEVKHLPGGXXXXXXXXXXXXXXXXXXXXXCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW-PDVPETAIFFIEDGKK 635
            S V +    + Q  +V+Y  VC+LP EYCEFG   +KC+ WL  N  +LY  L +EE  S    ++   ++            KA   +                           +T + GLE+ G++    +K+LGKKFATG+SV K P   E+I VQGD+S D+ E++ + +  ++PE+ I  +ED KK
Sbjct:    2 SEVAQNSPAEVQAKKVVYCGVCTLPPEYCEFGGTAKKCEEWLKDNHAELYQRLYSEEALSSNLSELSVSVRERAAKDAAKKEAKAAAAEARDAERKAAAKVQIKRVERNKRKH---VTVITGLEVHGLENKKVAKELGKKFATGSSVTKSPAGVEEITVQGDVSEDVKEWLLELYGKEIPESNIELVEDKKK 190          
BLAST of FC930634 vs. ExPASy Swiss-Prot
Match: DENR_COCIM (Translation machinery-associated protein 22 OS=Coccidioides immitis GN=TMA22 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.662e-20
Identity = 61/186 (32.80%), Postives = 90/186 (48.39%), Query Frame = 3
Query:   93 KPQPVRVLYYAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDL-AEELNSREADKVGEQLQSTGIXXXXXXXXKAEEVKHLPGGXXXXXXXXXXXXXXXXXXXXXCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDT-WPDVPETAIFFIEDGKKVPA 644
            +PQ   ++Y  VCSLP EYCEFG   +KC+ WL +N P ++  L +EE  +     +  Q +            KA  V+                           +T + GLE  G+     +K+LGKKFATG+SV K P   E+I VQGD+  D++E++ +    +VPE  +  +ED KK  A
Sbjct:   15 EPQARHIVYCGVCSLPPEYCEFGGTAKKCEEWLHENNPSMHQKLYSEETIAANLSTLSIQARERAAKDAAKKEAKAALVETR---NQERKAAAKVQIKRVERNKRKHVTVIAGLEAHGLDNKKVAKELGKKFATGSSVTKNPAGGEEITVQGDVCEDVLEWLVEVHGKEVPEDNLEIVEDKKKKKA 197          
BLAST of FC930634 vs. ExPASy Swiss-Prot
Match: DENR_ASPOR (Translation machinery-associated protein 22 OS=Aspergillus oryzae GN=tma22 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.818e-19
Identity = 59/182 (32.42%), Postives = 88/182 (48.35%), Query Frame = 3
Query:   99 QPVRVLYYAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQSTGIXXXXXXXXKAEEVKHL--PGGXXXXXXXXXXXXXXXXXXXXXCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW-PDVPETAIFFIEDGKK 635
            Q   V+Y  VC+LP EYCEFG   +KC+ WL +  P+LY    + L+S EA        S             +E K                             +T + GLE++G++    +K+LGKKFATG+SV +     E+I VQGD+S D+ +++ + +  ++PE  I  IED KK
Sbjct:   13 QARHVVYCGVCTLPPEYCEFGGTAKKCEEWLKEKQPELY----QRLHSEEAISANLSTLSISAQERAAKDAAKKEAKAALAEARDAERKAASKVQIKRVERNKRKHVTVIAGLEVYGLENKKVAKELGKKFATGSSVTRSAAGNEEITVQGDVSDDVQDWLLEVYGKEIPEANIEIIEDKKK 190          
BLAST of FC930634 vs. ExPASy Swiss-Prot
Match: DENR_ASPCL (Translation machinery-associated protein 22 OS=Aspergillus clavatus GN=tma22 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.907e-19
Identity = 58/179 (32.40%), Postives = 87/179 (48.60%), Query Frame = 3
Query:  108 RVLYYAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQSTGIXXXXXXXXKAEEVKHL--PGGXXXXXXXXXXXXXXXXXXXXXCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTW-PDVPETAIFFIEDGKK 635
            +++Y  VC+LP EYCEFG   +KC+ WL  N  + Y    + L S EA        S  +          +E K                             +T + GLE+ G++    +K+LGKKFATG+SV K P   E+I VQGD+S D+ E++ + +  ++PE+ I  +ED KK
Sbjct:   16 QIVYCGVCTLPPEYCEFGGTAKKCEEWLKDNHEETY----QRLYSEEALSSNLSTLSVSVRERAAKDAAKKEAKAALAEARDAERKAAAKVQIKRVERNKRKHVTVITGLEVHGLENKKVAKELGKKFATGSSVTKSPAGVEEITVQGDVSEDVQEWLLEVYGKELPESNIELVEDKKK 190          
BLAST of FC930634 vs. ExPASy Swiss-Prot
Match: DENR_MOUSE (Density-regulated protein OS=Mus musculus GN=Denr PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.847e-18
Identity = 59/184 (32.07%), Postives = 88/184 (47.83%), Query Frame = 3
Query:  102 PVRVLYYAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPDLAEELNSREADKVGEQLQSTGIXXXXXXXXKAEEVKHLPGG------XXXXXXXXXXXXXXXXXXXXXCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFITDTWPDVPETAIFFIEDGKK 635
            P+RVLY  VCSLP EYCE+ PD+ KC+ WL +N P+ +  L  E + +         Q TGI        + EE K    G                            +T V GL  F + L +A +   +KF+ GASV    T +++I +QGD + DI++ I + WP+V + +I  + + KK
Sbjct:   28 PLRVLYCGVCSLPTEYCEYMPDVAKCRQWLEKNFPNEFAKLTVENSPK---------QETGITEGQGPVGEEEEKKKQKRGGRGQIKQKKKTVPQKVTIAKIPRAKKKYVTRVCGLATFEIDLKEAQRFFAQKFSCGASV----TGEDEIIIQGDFTDDIIDVIQEKWPEVDDDSIEDLGEVKK 198          
BLAST of FC930634 vs. ExPASy Swiss-Prot
Match: DENR_CRYNE (Translation machinery-associated protein 22 OS=Cryptococcus neoformans GN=TMA22 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.701e-17
Identity = 69/198 (34.85%), Postives = 88/198 (44.44%), Query Frame = 3
Query:   81 VMAEKPQPVRVLYYAVCSLPAEYCEFGPDLEKCKPWLIQNTPDLYPD------LAEELNSREADKVGEQLQSTGIXXXXXXXXKAE-EVKHLPGGXXXXXXXXXXXXXXXXXXXXXCITTVKGLELFGVKLSDASKKLGKKFATGASVVKGPTEKEQIDVQGDISYDIVEFI---TDTWPDVPETAIFFIEDGKKVPA 644
            V     + V   Y AVCSLP EYCEFGP + KCK WL +   D Y        LA  + +   DK  E+L++           KAE E K                            T ++ LELFGV L  A+K+   KFATG+SV K P  +E+I +QGD+  +IVE I         VP   I  +E  KK  A
Sbjct:    5 VSGPSTKQVHPFYCAVCSLPTEYCEFGPSVSKCKAWLEEQDKDEYERVWGEGALASRIGTLSLDKQ-EKLEADAAKLEKKAAKKAEAEAKKKEQTKIIIKRSERTKRKHQ--------THIQNLELFGVDLKKAAKQFAGKFATGSSVSKTPQGEEEIVIQGDVGDEIVEMIRQQVGALKGVPADQITRVEVKKKKEA 193          
The following BLAST results are available for this feature:
BLAST of FC930634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
DENR_NEUCR9.314e-2436.36Translation machinery-associated protein 22 OS=Neu... [more]
DENR_CHAGB1.589e-2337.57Translation machinery-associated protein 22 OS=Cha... [more]
DENR_SCHPO1.345e-2235.11Translation machinery-associated protein 22 OS=Sch... [more]
DENR_NEOFI9.638e-2133.70Translation machinery-associated protein 22 OS=Neo... [more]
DENR_ASPFU1.644e-2032.29Translation machinery-associated protein 22 OS=Asp... [more]
DENR_COCIM3.662e-2032.80Translation machinery-associated protein 22 OS=Coc... [more]
DENR_ASPOR1.818e-1932.42Translation machinery-associated protein 22 OS=Asp... [more]
DENR_ASPCL6.907e-1932.40Translation machinery-associated protein 22 OS=Asp... [more]
DENR_MOUSE5.847e-1832.07Density-regulated protein OS=Mus musculus GN=Denr ... [more]
DENR_CRYNE1.701e-1734.85Translation machinery-associated protein 22 OS=Cry... [more]

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Properties
Property NameValue
Genbank descriptionC34009F06EF PostHarvC1 Citrus clementina cDNA clone C34009F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930634 ID=FC930634; Name=FC930634; organism=Citrus clementina; type=EST; length=731bp
AAGCGTGTCGTTTTGCTCTTCTTACAAAATTCCCGTCACTCGGCAGTTGG
CAAAGAGAGTAGTGGAGCTCTGTCTTTGAAGTAATGGCGGAAAAACCGCA
GCCGGTTCGCGTACTGTACTATGCGGTGTGCAGTTTACCGGCGGAGTACT
GTGAATTCGGACCCGATCTCGAGAAATGCAAGCCCTGGCTAATTCAAAAC
ACACCGGACCTTTACCCCGATCTTGCCGAAGAGTTAAATTCGAGGGAAGC
CGATAAAGTCGGCGAGCAGTTACAATCAACTGGCATTTCCTCTCCTGCTT
CTTCAGCTCCTAAGGCAGAAGAAGTTAAACACCTTCCTGGTGGAAAGATA
AAGAAAAAGGATAAGAAAGAAGTTGTTATCGAAAAGGTTGTTCGTAACAA
ACGGAAATGTATCACTACAGTTAAAGGCCTGGAACTTTTTGGTGTTAAAC
TTAGTGATGCTTCAAAGAAACTTGGGAAAAAGTTTGCTACAGGAGCCTCT
GTTGTTAAGGGACCAACTGAGAAGGAGCAAATTGATGTCCAAGGAGACAT
ATCATACGACATCGTGGAGTTTATAACAGATACCTGGCCTGATGTTCCTG
AAACTGCAATCTTCTTCATCGAAGATGGAAAGAAAGTGCCTGCTGTTTGA
TTGAAATAGTAGCTCATGGAAAAATGGAATATGGTATCTTCCTTCCTCTT
CACNAGTCTCTCACGAGATTTTTATACGTAG
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