FC930680
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930680 vs. ExPASy Swiss-Prot
Match: U183_ARATH (UPF0183 protein At3g51130 OS=Arabidopsis thaliana GN=At3g51130 PE=2 SV=2) HSP 1 Score: 338.576 bits (867), Expect = 1.710e-92 Identity = 156/185 (84.32%), Postives = 168/185 (90.81%), Query Frame = 1 Query: 94 LQSQKPRRRCEGTGMGAIVLDLRPGVGIGPFSLGMPICKAFASIEQQPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWTQRLRLIEIFDIKRLQMRYATSLIGGSSTLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPAHYADCCQDREAELPLEFPDGTTPVTCRVSIY 648 L Q+PRRR EGT MGA V DLRPGVGIGPFS+GMPIC+AFA IEQQPNIYDVVHVKY+DE+PLKLD+VISFPDHGFHLRFDPW+QRLRL+EIFD+KRLQMRYATS+IGG STLATFVAVYALFGPTFPG+YDKER +Y LFYPGLSF FPIP Y DCC D EA LPLEFPDGTTPVTCRVSIY Sbjct: 11 LVMQRPRRRLEGTAMGATVFDLRPGVGIGPFSIGMPICEAFAQIEQQPNIYDVVHVKYYDEDPLKLDVVISFPDHGFHLRFDPWSQRLRLVEIFDVKRLQMRYATSMIGGPSTLATFVAVYALFGPTFPGIYDKERGIYSLFYPGLSFEFPIPNQYTDCCHDGEAALPLEFPDGTTPVTCRVSIY 195
BLAST of FC930680 vs. ExPASy Swiss-Prot
Match: U183_DROME (UPF0183 protein CG7083 OS=Drosophila melanogaster GN=CG7083 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.999e-21 Identity = 61/174 (35.06%), Postives = 91/174 (52.30%), Query Frame = 1 Query: 151 LDLRPGVGIG----PFSLGMPICKAFASIEQQPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWTQRLRLIEIFDIKRLQMRYATSLIGGSSTLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPIPAH----YADCCQDREAELPLEFPDGTTPVTCRVSIY 648 L++ P + +G F LGM +A A I+ Q I V V Y D PL +DI+I+ P G L FDP +QRL+ IE+F++K +++RY L + + FG T PGVYD + ++ L + GLSF FP+ + YA L F +G +PV ++S+Y Sbjct: 4 LEIVPEISLGCDAWEFVLGMHFSQAIAIIQSQVGIIKGVQVLYSDTTPLGVDIIINLPQDGVRLIFDPVSQRLKTIEVFNMKLVKLRYFGVYFNSPEVLPSIEQIEHSFGATHPGVYDAAKQLFALHFRGLSFYFPVDSKLHSGYAHGLSS------LVFLNGASPVVSKMSLY 171
BLAST of FC930680 vs. ExPASy Swiss-Prot
Match: U183_CAEEL (UPF0183 protein T01G9.2 OS=Caenorhabditis elegans GN=T01G9.2 PE=1 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 1.383e-17 Identity = 44/121 (36.36%), Postives = 68/121 (56.20%), Query Frame = 1 Query: 184 FSLGMPICKAFASIEQQPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWTQRLRLIEIFDIKRLQMRYATSLIGGSSTLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFP 546 F LGMPI + A I+Q P + V +KY ++P DI+I G L FD +Q ++LIE+ ++ + + Y ++ + +AT V FG T PG YD + ++Y+ +PGLSF FP Sbjct: 37 FVLGMPINQCIAMIQQHPRMLTKVELKYSKKDPFYQDIIIYIGSTGIRLYFDGLSQLIKLIEVDNLSMITLTYNDTIFSDPNNMATLDRVNEFFGSTHPGSYDDKHNIYVQSWPGLSFCFP 157
BLAST of FC930680 vs. ExPASy Swiss-Prot
Match: CP070_RAT (UPF0183 protein C16orf70 homolog OS=Rattus norvegicus PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.811e-16 Identity = 39/122 (31.97%), Postives = 70/122 (57.38%), Query Frame = 1 Query: 184 FSLGMPICKAFASIEQQPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWTQRLRLIEIFDIKRLQMRYATSLIGGSSTLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPI 549 F+LGMP+ +A A +++ I V V Y ++ PL D++++ G L FD + QRL++IE++D+ +++++Y + T + FG T PGVY+ ++ L + GLSF+F + Sbjct: 19 FTLGMPLAQAVAILQKHCRIIKNVQVLYSEQSPLSHDLILNLTQDGIKLLFDAFNQRLKVIEVYDLTKVKLKYCGVHFNSQAIAPTIEQIDQSFGATHPGVYNSAEQLFHLNFRGLSFSFQL 140
BLAST of FC930680 vs. ExPASy Swiss-Prot
Match: CP070_HUMAN (UPF0183 protein C16orf70 OS=Homo sapiens GN=C16orf70 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.691e-15 Identity = 39/122 (31.97%), Postives = 69/122 (56.56%), Query Frame = 1 Query: 184 FSLGMPICKAFASIEQQPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWTQRLRLIEIFDIKRLQMRYATSLIGGSSTLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPI 549 F+LGMP+ +A A +++ I V V Y ++ PL D++++ G L FD + QRL++IE+ D+ +++++Y + T + FG T PGVY+ ++ L + GLSF+F + Sbjct: 19 FTLGMPLAQAVAILQKHCRIIKNVQVLYSEQSPLSHDLILNLTQDGIKLMFDAFNQRLKVIEVCDLTKVKLKYCGVHFNSQAIAPTIEQIDQSFGATHPGVYNSAEQLFHLNFRGLSFSFQL 140
BLAST of FC930680 vs. ExPASy Swiss-Prot
Match: CP070_MOUSE (UPF0183 protein C16orf70 homolog OS=Mus musculus PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.096e-14 Identity = 38/122 (31.15%), Postives = 69/122 (56.56%), Query Frame = 1 Query: 184 FSLGMPICKAFASIEQQPNIYDVVHVKYFDEEPLKLDIVISFPDHGFHLRFDPWTQRLRLIEIFDIKRLQMRYATSLIGGSSTLATFVAVYALFGPTFPGVYDKERSVYMLFYPGLSFAFPI 549 F+LGMP+ +A A +++ I V V Y ++ PL D++++ G L FD + QRL++IE+ ++ +++++Y + T + FG T PGVY+ ++ L + GLSF+F + Sbjct: 19 FTLGMPLAQAVAILQKHCRIIRNVQVLYSEQSPLSHDLILNLTQDGITLLFDAFNQRLKVIEVCELTKVKLKYCGVHFNSQAIAPTIEQIDQSFGATHPGVYNSTEQLFHLNFRGLSFSFQL 140 The following BLAST results are available for this feature:
BLAST of FC930680 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930680 ID=FC930680; Name=FC930680; organism=Citrus clementina; type=EST; length=649bpback to top |