FC930681

Overview
NameFC930681
Unique NameFC930681
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length750
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930681 vs. ExPASy Swiss-Prot
Match: SFGH_ARATH (S-formylglutathione hydrolase OS=Arabidopsis thaliana GN=SFGH PE=1 SV=2)

HSP 1 Score: 344.739 bits (883), Expect = 1.338e-95
Identity = 162/194 (83.51%), Postives = 173/194 (89.18%), Query Frame = 3
Query:   96 TEISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXHKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTNYLGSNK 677
            +EI S+KMF GYNKR+KHFS TLGCSM F IYF       HK PVLYWLSGLTCTDENFI KSGAQRAAS  G+AL+APDTSPRGLNVEGEADS+DFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSENF QL+T++ASI GHSMGGHGALTIYL+NLDKYKSVSAFAPI NP+NC WGQKAFTNYLG NK
Sbjct:    6 SEIGSTKMFDGYNKRYKHFSETLGCSMTFSIYFPPSASSSHKSPVLYWLSGLTCTDENFIIKSGAQRAASTHGIALVAPDTSPRGLNVEGEADSYDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSENFSQLDTTKASISGHSMGGHGALTIYLRNLDKYKSVSAFAPITNPINCAWGQKAFTNYLGDNK 199          

HSP 2 Score: 26.9498 bits (58), Expect = 1.338e-95
Identity = 10/15 (66.67%), Postives = 13/15 (86.67%), Query Frame = 2
Query:  674 QADWEEYDATSLVSR 718
            +A WEEYDAT L+S+
Sbjct:  199 KAAWEEYDATCLISK 213          
BLAST of FC930681 vs. ExPASy Swiss-Prot
Match: ESTD_BOVIN (S-formylglutathione hydrolase OS=Bos taurus GN=ESD PE=2 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 1.603e-66
Identity = 120/194 (61.86%), Postives = 149/194 (76.80%), Query Frame = 3
Query:   99 EISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXHKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTNYLGSNK 677
            ++SSSK FGG  K F+H S  L C M F +Y         K PVLYWLSGLTCT++NFI+KSG  +AAS  G+ +IAPDTSPRG N++GE DSWDFG GAGFY++AT++ WK N+RMY YV KELP+L+++NFP ++  R S+FGHSMGGHGAL   LKN  KYKSVSAFAP+CNPV C WG+KAFT YLG+++
Sbjct:    5 QVSSSKCFGGLQKVFEHDSVELKCKMKFAVYLPPKAETG-KCPVLYWLSGLTCTEQNFISKSGYHQAASEHGLVVIAPDTSPRGCNIKGEEDSWDFGTGAGFYVDATEDLWKTNYRMYSYVTKELPQLVNDNFP-VDPQRMSVFGHSMGGHGALICALKNPGKYKSVSAFAPLCNPVLCRWGKKAFTGYLGTDQ 196          

HSP 2 Score: 23.0978 bits (48), Expect = 1.603e-66
Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 2
Query:  674 QADWEEYDATSLV 712
            Q+ WE YDAT LV
Sbjct:  196 QSKWEAYDATYLV 208          
BLAST of FC930681 vs. ExPASy Swiss-Prot
Match: ESTD_RAT (S-formylglutathione hydrolase OS=Rattus norvegicus GN=Esd PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.029e-65
Identity = 123/200 (61.50%), Postives = 149/200 (74.50%), Query Frame = 3
Query:   81 METKPTEISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXHKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTNYLGSNK 677
            ME K  +ISS+K FGG  K F+H S  L C M F IY         K P LYWLSGLTCT++NFI+KSG Q+AAS  G+ +IAPDTSPRG N++GE DSWDFG GAGF++NAT++ W  N+RMY YV +ELP+L++ NFP ++  R SIFGHSMGGHGAL   LKN  KY+SVSAFAPICNPV CPWG+KAF  YLG ++
Sbjct:    1 MELK--QISSNKCFGGLQKVFEHSSVELKCKMKFAIYLPPQAESA-KCPALYWLSGLTCTEQNFISKSGCQQAASEHGLVVIAPDTSPRGCNIKGEDDSWDFGTGAGFFVNATEDPWNTNYRMYSYVTEELPQLINANFP-VDPQRISIFGHSMGGHGALICALKNPGKYRSVSAFAPICNPVLCPWGKKAFNGYLGPDQ 196          
BLAST of FC930681 vs. ExPASy Swiss-Prot
Match: ESTD_PIG (S-formylglutathione hydrolase OS=Sus scrofa GN=ESD PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.293e-65
Identity = 120/194 (61.86%), Postives = 147/194 (75.77%), Query Frame = 3
Query:   99 EISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXHKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTNYLGSNK 677
            ++SS+K FGG  K F+H S  L C M F IY         K P LYWLSGLTCT++NFI KSG  +AAS  G+ +IAPDTSPRG N++GE +SWDFG GAGFYL+AT++ WK N+RMY YV +ELP+L++ NFP ++  R SIFGHSMGGHGAL   LKN  KYKSVSAFAPICNPV CPWG+KAF+ YLG+++
Sbjct:    5 QLSSNKCFGGLQKVFEHDSVELKCKMKFAIYLPPKAETG-KCPALYWLSGLTCTEQNFITKSGYHQAASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYLDATEDPWKTNYRMYSYVTEELPQLINANFP-VDPQRMSIFGHSMGGHGALICTLKNPGKYKSVSAFAPICNPVLCPWGKKAFSGYLGTDE 196          
BLAST of FC930681 vs. ExPASy Swiss-Prot
Match: ESTD_MOUSE (S-formylglutathione hydrolase OS=Mus musculus GN=Esd PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.912e-65
Identity = 119/194 (61.34%), Postives = 147/194 (75.77%), Query Frame = 3
Query:   99 EISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXHKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTNYLGSNK 677
            +ISS++ FGG  K F+H S  L C M F +Y         K P LYWLSGLTCT++NFI+KSG Q+AAS  G+ +IAPDTSPRG N++GE DSWDFG GAGFY+NAT++ WK N+RMY YV +ELP+L++ NFP ++  R SIFGHSMGGHGAL   LKN  KY+SVSAFAPICNPV C WG+KAF+ YLG ++
Sbjct:    5 QISSNRCFGGLQKVFEHSSVELKCKMRFAVYLPPQAESG-KCPALYWLSGLTCTEQNFISKSGYQQAASEHGLVVIAPDTSPRGCNIKGEDDSWDFGTGAGFYVNATEDPWKANYRMYSYVTEELPQLINANFP-VDPQRMSIFGHSMGGHGALICALKNPGKYRSVSAFAPICNPVLCSWGKKAFSGYLGPDE 196          
BLAST of FC930681 vs. ExPASy Swiss-Prot
Match: ESTD_HUMAN (S-formylglutathione hydrolase OS=Homo sapiens GN=ESD PE=1 SV=2)

HSP 1 Score: 248.054 bits (632), Expect = 3.912e-65
Identity = 118/194 (60.82%), Postives = 148/194 (76.29%), Query Frame = 3
Query:   99 EISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXHKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWK-NWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTNYLGSNK 677
            +ISS+K FGG  K F+H S  L C M F +Y         K P LYWLSGLTCT++NFI+KSG  ++AS  G+ +IAPDTSPRG N++GE +SWDFG GAGFY++AT++ WK N+RMY YV +ELP+L++ NFP ++  R SIFGHSMGGHGAL   LKN  KYKSVSAFAPICNPV CPWG+KAF+ YLG+++
Sbjct:    5 QISSNKCFGGLQKVFEHDSVELNCKMKFAVYLPPKAETG-KCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGEDESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFP-VDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAPICNPVLCPWGKKAFSGYLGTDQ 196          
BLAST of FC930681 vs. ExPASy Swiss-Prot
Match: SFGH1_ECOSM (S-formylglutathione hydrolase frmB OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=frmB PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.305e-52
Identity = 105/217 (48.39%), Postives = 141/217 (64.98%), Query Frame = 3
Query:  102 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXHKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKW-KNWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTNYLGSNKLIGRNMMPHLWFQETECICHILID 749
            I     FGG+   ++H+S +L C MN  +Y         K PVLYWLSGLTC ++NFI KSG QR A+   + ++APDTSPRG +V  +AD +D G GAGFYLNATQ  W ++++MYDY+  ELP L+ ++FP   T+R SI GHSMGG GAL + L+N D+Y SVSAF+PI +P   PWGQ+AF  YLG NK    +  P     + + +  I++D
Sbjct:    4 IEKHASFGGWQNVYRHYSQSLKCEMNVGVYLPPKAGN-EKLPVLYWLSGLTCNEQNFITKSGMQRYAAEHNIIVVAPDTSPRGSHV-ADADRYDLGQGAGFYLNATQAPWNEHYKMYDYIHNELPDLVMQHFPA--TTRKSISGHSMGGLGALVLALRNPDEYVSVSAFSPIVSPSQVPWGQQAFAAYLGENKEAWLDYDPVSLISQGQRVAEIMVD 216          
BLAST of FC930681 vs. ExPASy Swiss-Prot
Match: SFGH1_ECOHS (S-formylglutathione hydrolase frmB OS=Escherichia coli O9:H4 (strain HS) GN=frmB PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.305e-52
Identity = 105/217 (48.39%), Postives = 141/217 (64.98%), Query Frame = 3
Query:  102 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXHKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKW-KNWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTNYLGSNKLIGRNMMPHLWFQETECICHILID 749
            I     FGG+   ++H+S +L C MN  +Y         K PVLYWLSGLTC ++NFI KSG QR A+   + ++APDTSPRG +V  +AD +D G GAGFYLNATQ  W ++++MYDY+  ELP L+ ++FP   T+R SI GHSMGG GAL + L+N D+Y SVSAF+PI +P   PWGQ+AF  YLG NK    +  P     + + +  I++D
Sbjct:    4 IEKHASFGGWQNVYRHYSQSLKCEMNVGVYLPPKAAN-EKLPVLYWLSGLTCNEQNFITKSGMQRYAAEHNIIVVAPDTSPRGSHV-ADADRYDLGQGAGFYLNATQAPWNEHYKMYDYIRNELPDLVMQHFPA--TTRKSISGHSMGGLGALVLALRNPDEYVSVSAFSPIVSPSQAPWGQQAFAAYLGENKDAWLDYDPVSLISQGQRVAEIMVD 216          
BLAST of FC930681 vs. ExPASy Swiss-Prot
Match: SFGH1_SHISS (S-formylglutathione hydrolase frmB OS=Shigella sonnei (strain Ss046) GN=frmB PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.705e-52
Identity = 105/217 (48.39%), Postives = 141/217 (64.98%), Query Frame = 3
Query:  102 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXHKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKW-KNWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTNYLGSNKLIGRNMMPHLWFQETECICHILID 749
            I     FGG+   ++H+S +L C MN  +Y         K PVLYWLSGLTC ++NFI KSG QR A+   + ++APDTSPRG +V  +AD +D G GAGFYLNATQ  W ++++MYDY+  ELP L+ ++FP   T+R SI GHSMGG GAL + L+N D+Y SVSAF+PI +P   PWGQ+AF  YLG NK    +  P     + + +  I++D
Sbjct:    4 IEKHASFGGWQNVYRHYSQSLKCEMNVGVYLPPKAAN-EKLPVLYWLSGLTCNEQNFITKSGMQRYAAEHNIIVVAPDTSPRGSHV-ADADRYDLGQGAGFYLNATQAPWNEHYKMYDYIRNELPDLVMQHFPA--TTRKSISGHSMGGLGALVLALRNPDEYVSVSAFSPIVSPSQVPWGQQAFAAYLGENKDAWLDYDPVSLISQGQRVAEIMVD 216          
BLAST of FC930681 vs. ExPASy Swiss-Prot
Match: SFGH1_ECOL6 (S-formylglutathione hydrolase frmB OS=Escherichia coli O6 GN=frmB PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.705e-52
Identity = 105/217 (48.39%), Postives = 140/217 (64.52%), Query Frame = 3
Query:  102 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXHKFPVLYWLSGLTCTDENFIAKSGAQRAASAEGVALIAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKW-KNWRMYDYVVKELPKLLSENFPQLETSRASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPICNPVNCPWGQKAFTNYLGSNKLIGRNMMPHLWFQETECICHILID 749
            I     FGG+   ++H+S +L C MN  +Y         K PVLYWLSGLTC ++NFI KSG QR A+   + ++APDTSPRG +V  +AD +D G GAGFYLNATQ  W ++++MYDY+  ELP L+  +FP   T+R SI GHSMGG GAL + L+N D+Y SVSAF+PI +P   PWGQ+AF  YLG NK    +  P     + + +  I++D
Sbjct:    4 IEKHASFGGWQNVYRHYSQSLKCEMNVGVYLPPKAEN-EKLPVLYWLSGLTCNEQNFITKSGMQRYAAEHNIIVVAPDTSPRGSHV-ADADRYDLGQGAGFYLNATQAPWNEHYKMYDYIRNELPNLVMHHFPA--TARKSISGHSMGGLGALVLALRNPDEYASVSAFSPIVSPSQVPWGQQAFAAYLGENKDAWLDYDPVSLISQGQRVAEIMVD 216          
The following BLAST results are available for this feature:
BLAST of FC930681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
SFGH_ARATH1.338e-9583.51S-formylglutathione hydrolase OS=Arabidopsis thali... [more]
ESTD_BOVIN1.603e-6661.86S-formylglutathione hydrolase OS=Bos taurus GN=ESD... [more]
ESTD_RAT1.029e-6561.50S-formylglutathione hydrolase OS=Rattus norvegicus... [more]
ESTD_PIG2.293e-6561.86S-formylglutathione hydrolase OS=Sus scrofa GN=ESD... [more]
ESTD_MOUSE3.912e-6561.34S-formylglutathione hydrolase OS=Mus musculus GN=E... [more]
ESTD_HUMAN3.912e-6560.82S-formylglutathione hydrolase OS=Homo sapiens GN=E... [more]
SFGH1_ECOSM1.305e-5248.39S-formylglutathione hydrolase frmB OS=Escherichia ... [more]
SFGH1_ECOHS1.305e-5248.39S-formylglutathione hydrolase frmB OS=Escherichia ... [more]
SFGH1_SHISS1.705e-5248.39S-formylglutathione hydrolase frmB OS=Shigella son... [more]
SFGH1_ECOL61.705e-5248.39S-formylglutathione hydrolase frmB OS=Escherichia ... [more]

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Properties
Property NameValue
Genbank descriptionC34010B07EF PostHarvC1 Citrus clementina cDNA clone C34010B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930681 ID=FC930681; Name=FC930681; organism=Citrus clementina; type=EST; length=750bp
GGACTCACTCTTTAATCTGCTGAAAGAACAAAGACCGTACACACACAGGG
AGAGCTCAACACAATCAATCACAGTGAAAAATGGAGACGAAGCCGACAGA
GATAAGCAGTTCTAAGATGTTCGGTGGATACAACAAAAGATTCAAGCATT
TCAGTACAACACTGGGCTGCTCCATGAATTTCCACATCTACTTCCCTCCT
TCTTCTTCTCCATCCCACAAATTCCCTGTGCTTTACTGGCTCTCTGGTCT
TACCTGCACTGATGAAAATTTTATTGCTAAGTCAGGAGCTCAACGTGCTG
CTTCAGCTGAAGGTGTGGCTCTGATTGCCCCTGATACATCTCCAAGAGGC
CTGAATGTGGAAGGAGAGGCAGATAGCTGGGATTTTGGTGTAGGTGCTGG
ATTTTATCTTAATGCTACACAGGAGAAGTGGAAGAACTGGCGTATGTATG
ACTATGTTGTCAAGGAATTGCCCAAACTTCTGAGTGAAAATTTTCCACAG
CTTGAAACTTCTCGAGCATCCATATTTGGTCACTCAATGGGTGGGCATGG
TGCTTTGACAATCTATCTGAAAAATCTTGACAAGTATAAGTCTGTATCTG
CCTTTGCTCCAATTTGCAATCCTGTCAACTGTCCCTGGGGTCAGAAGGCT
TTTACAAATTATCTTGGTAGTAACAAGCTGATTGGGAGGAATATGATGCC
ACATCTCTGGTTTCAAGAAACAGAATGTATCTGCCACATTTTGATTGATC
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