FC930693
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930693 vs. ExPASy Swiss-Prot
Match: SCAM4_ARATH (Secretory carrier-associated membrane protein 4 OS=Arabidopsis thaliana GN=SCAMP4 PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.012e-48 Identity = 95/158 (60.13%), Postives = 111/158 (70.25%), Query Frame = 1 Query: 208 MNRHHDPNPFDEEE--VNPFSNGPAAPASRSQVPSVTSEPIGFGQKYGATVDIPLDNMNEPKKKERELASWEADLXXXXXXXXXXXXXXXXXGVPTDDRNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWLGIVLCLAFNVIAVIVCWIKAEVSNLF 675 MNRHHDPNPFDE+E VNPFS G +VP+ S P+ +GQ ATVDIPLDNMN+ +K+R+LA WEA+L GV DD+NWPPFFPIIHHDI+KEIP+HAQ+LQYLAFASWLGIVLCL FNVIA +VCWIK +F Sbjct: 1 MNRHHDPNPFDEDEEIVNPFSKGGG------RVPAA-SRPVEYGQSLDATVDIPLDNMNDSSQKQRKLADWEAELRKKEMDIKRREEAIAKFGVQIDDKNWPPFFPIIHHDIAKEIPVHAQKLQYLAFASWLGIVLCLVFNVIATMVCWIKGGGVKIF 151
BLAST of FC930693 vs. ExPASy Swiss-Prot
Match: SCAM6_ORYSJ (Secretory carrier-associated membrane protein 6 OS=Oryza sativa subsp. japonica GN=SCAMP6 PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 7.506e-44 Identity = 92/159 (57.86%), Postives = 103/159 (64.78%), Query Frame = 1 Query: 217 HHDPNPFDEEEV--NPFSNGPAAPA---SRSQVPSVTSEPIGFGQKYG-ATVDIPLDNMNEPKKKERELASWEADLXXXXXXXXXXXXXXXXXGVPTDDRNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWLGIVLCLAFNVIAVIVCWIKAEVSNLF 675 HHDPNPFDE NPFSNG SR Q +EP GFG G ATVD+PLD M + K K REL+SWE DL GVP +D+NWPPFFPIIHHDI+ EIP + Q+LQYLAFASWLGIVLCL++N IAVIVCWIK S LF Sbjct: 2 HHDPNPFDEGNADDNPFSNGGGGGGGGGSRQQYGFRPTEPAGFGAGRGDATVDVPLDTMGDSKSKARELSSWETDLKRREADIKRREEALRNAGVPMEDKNWPPFFPIIHHDIANEIPANLQKLQYLAFASWLGIVLCLSWNFIAVIVCWIKEGDSKLF 160
BLAST of FC930693 vs. ExPASy Swiss-Prot
Match: SCAM5_ORYSJ (Secretory carrier-associated membrane protein 5 OS=Oryza sativa subsp. japonica GN=SCAMP5 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.565e-41 Identity = 92/168 (54.76%), Postives = 105/168 (62.50%), Query Frame = 1 Query: 217 HHDPNPFDE-EEVNPFSNGPAAPASR--------------SQVPSVTSEPIGFGQKYGATVDIPLDNMNEPKKKERELASWEADLXXXXXXXXXXXXXXXXXGVPTDDRNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWLGIVLCLAFNVIAVIVCWIKAEVSNLF 675 HHDPNPFDE + NPFSNG A R SQ S +G G K GATVDIPLDNM++ K K +EL WEADL GVP +++NWPPFFPIIHHDI+ EIP +AQ+LQYLAFASWLGIVLCL +N IAVIVCWI+ S LF Sbjct: 2 HHDPNPFDEGADDNPFSNGGGGGARRGGGGGGGGGGGGGKSQF-SFGFGGLGGGSKGGATVDIPLDNMSDSKGKGKELLQWEADLKRREADIRRREEALKSAGVPMEEKNWPPFFPIIHHDIANEIPANAQKLQYLAFASWLGIVLCLFWNFIAVIVCWIRGGDSKLF 168
BLAST of FC930693 vs. ExPASy Swiss-Prot
Match: SCAM2_ORYSJ (Secretory carrier-associated membrane protein 2 OS=Oryza sativa subsp. japonica GN=SCAMP2 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.763e-38 Identity = 77/149 (51.68%), Postives = 98/149 (65.77%), Query Frame = 1 Query: 208 MNRHHDPNPFDEEEVNPFSNGPAAPASRSQVPSVTSEPIGFGQKYGATVDIPLDNMNEPKKKERELASWEADLXXXXXXXXXXXXXXXXXGVPTDDRNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWLGIVLCLAFNVIAVIVCWIK 654 M +D NPFDE++VNPF+ G PAS S++P + EP GF GATVDIPLD+ + KKKE+EL + EA+L G+ +++NWPPFFPIIHHDIS EIPIH QR+QYLAF+S LG+ CL +N+IA WIK Sbjct: 1 MAGRYDRNPFDEDDVNPFAGGSVPPASNSRMPPLPHEP-GFYNDRGATVDIPLDSTKDMKKKEKELQAKEAELNKRESELRRREEAASRAGIVIEEKNWPPFFPIIHHDISNEIPIHLQRMQYLAFSSLLGLAACLFWNIIATTAAWIK 148
BLAST of FC930693 vs. ExPASy Swiss-Prot
Match: SCAM3_ARATH (Secretory carrier-associated membrane protein 3 OS=Arabidopsis thaliana GN=SCAMP3 PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.411e-36 Identity = 78/155 (50.32%), Postives = 101/155 (65.16%), Query Frame = 1 Query: 208 MNRHHDPNPF-DEEEVNPFSNGPAAP-ASRSQVPSVTSEPIGFGQKYGATVDIPLDNMN--EPKKKERELASWEADLXXXXXXXXXXXXXXXXXGVPTDDRNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWLGIVLCLAFNVIAVIVCWIKAE 660 M +DPNPF +EEEVNPF+N P AS S++ + EP+GF YG TVDIPLD + KKKE+EL + EA+L G+ + +NWPPFFP+IHHDI+ EIP+H QRLQY+ FA++LG+VLCL +N+IAV WIK E Sbjct: 1 MANRYDPNPFAEEEEVNPFANARGVPPASNSRLSPLPPEPVGFD--YGRTVDIPLDRAGTQDLKKKEKELQAKEAELKRREQDLKRKEDAAARAGIVIEVKNWPPFFPLIHHDIANEIPVHLQRLQYVTFATYLGLVLCLFWNIIAVTTAWIKGE 153
BLAST of FC930693 vs. ExPASy Swiss-Prot
Match: SCAM_PEA (Secretory carrier-associated membrane protein OS=Pisum sativum GN=PSAM2 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 9.826e-36 Identity = 74/152 (48.68%), Postives = 97/152 (63.82%), Query Frame = 1 Query: 208 MNRHHDPNPFDEEEVNPFSNG-PAAPASRSQVPSVTSEPIGFGQKYGATVDIPLDNMNEPKKKERELASWEADLXXXXXXXXXXXXXXXXXGVPTDDRNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWLGIVLCLAFNVIAVIVCWIKAE 660 M +DPNPFDEE+VNPFSN AA A+ S+ + + + +G TVDIPLD + KKKER+L + EA+L G+ +++NWPPFFPIIHHDI+ EIPIH + LQY+AF S LG+VLCL +NV++V WIK E Sbjct: 1 MAGRYDPNPFDEEQVNPFSNPRSAASATNSRPAPLNPDRADYNYGFGPTVDIPLDTSTDGKKKERDLQAKEAELRKREQEVRRKEEAIARAGIVIEEKNWPPFFPIIHHDITNEIPIHLRTLQYVAFFSLLGLVLCLTWNVVSVTAAWIKGE 152
BLAST of FC930693 vs. ExPASy Swiss-Prot
Match: SCAM3_ORYSJ (Secretory carrier-associated membrane protein 3 OS=Oryza sativa subsp. japonica GN=SCAMP3 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.392e-34 Identity = 67/147 (45.58%), Postives = 94/147 (63.95%), Query Frame = 1 Query: 220 HDPNPFDEEEVNPFSNGPAAPASRSQVPSVTSEPIGFGQKYGATVDIPLDNMNEPKKKERELASWEADLXXXXXXXXXXXXXXXXXGVPTDDRNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWLGIVLCLAFNVIAVIVCWIKAE 660 H N F++++VNPF+ G PA+ S++P ++ EP F VDIPLD+ + KKKE+EL + EA+L G+ +D+NWPPFFP+IHH+IS EIPIH QR+QYLAF+S+LG+ CL +N+IA W+K E Sbjct: 5 HGRNGFEDDDVNPFAGGSVPPANNSRLPPLSHEPADF-----YNVDIPLDSSKDLKKKEKELQAMEAELNKRERELKRKEEAAAQAGIVIEDKNWPPFFPLIHHNISNEIPIHLQRMQYLAFSSFLGLAACLFWNIIATTTAWVKGE 146
BLAST of FC930693 vs. ExPASy Swiss-Prot
Match: SCAM2_ARATH (Secretory carrier-associated membrane protein 2 OS=Arabidopsis thaliana GN=SCAMP2 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.958e-32 Identity = 70/148 (47.30%), Postives = 93/148 (62.84%), Query Frame = 1 Query: 220 HDPNPFDEEEVNPFSNGPAAP-ASRSQVPSVTSEPIGFGQKYGATVDIPLDNMNEPKKKERELASWEADLXXXXXXXXXXXXXXXXXGVPTDDRNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWLGIVLCLAFNVIAVIVCWIKAE 660 HDPNPF +EE+NPF+N + P AS S + + EP GATVDIPLD+ N+ + KE EL + E +L GV +++NWP FFP+IHHDI EIPIH Q++QY+AF + LG+V CL +N++AV V WIK E Sbjct: 4 HDPNPFADEEINPFANHTSVPPASNSYLKPLPPEPYD----RGATVDIPLDSGNDLRAKEMELQAKENELKRKEQELKRREDAIARTGVVIEEKNWPEFFPLIHHDIPNEIPIHLQKIQYVAFTTLLGLVGCLLWNIVAVTVAWIKGE 147
BLAST of FC930693 vs. ExPASy Swiss-Prot
Match: SCAM1_ARATH (Secretory carrier-associated membrane protein 1 OS=Arabidopsis thaliana GN=SCAMP1 PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.958e-32 Identity = 66/147 (44.90%), Postives = 93/147 (63.27%), Query Frame = 1 Query: 220 HDPNPFDEEEVNPFSNGPAAPASRSQVPSVTSEPIGFGQKYGATVDIPLDNMNEPKKKERELASWEADLXXXXXXXXXXXXXXXXXGVPTDDRNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWLGIVLCLAFNVIAVIVCWIKAE 660 + + FD+ E+NPF+N + PA+ S++ + EP GAT+DIPLD+ + K KE+EL EA+L G+ +++NWPPFFP+IHHDIS EIPIH QR+QY+AF S LG+V+CL +N++AV WIK E Sbjct: 4 YQSHSFDDGEINPFANPTSVPAATSKLSPLPPEPYD----RGATMDIPLDSGKDLKAKEKELREKEAELKRREQEIKRKEDAIAQAGIVIEEKNWPPFFPLIHHDISNEIPIHLQRIQYVAFTSMLGLVVCLLWNIVAVTTAWIKGE 146
BLAST of FC930693 vs. ExPASy Swiss-Prot
Match: SCAM5_ARATH (Secretory carrier-associated membrane protein 5 OS=Arabidopsis thaliana GN=SCAMP5 PE=2 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 2.504e-31 Identity = 75/157 (47.77%), Postives = 97/157 (61.78%), Query Frame = 1 Query: 208 MNRHHDPNPFDEE-EVNPFSNGPAAPA-SRSQVPSVTSEPIGFGQKYGATVDIPLDN----MNEPKKKERELASWEADLXXXXXXXXXXXXXXXXXGVPTDDRNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWLGIVLCLAFNVIAVIVCWIKAE 660 M +D N FDE+ EVNPF+N + PA S S++ + EP GFG YG TVDIPLD + KKKE+EL + EADL G+ + +NWP FFP+IHHDI+ EI + QRLQY+AFA++LG+VL L +N+IAV WIK E Sbjct: 1 MGGRYDRNTFDEQDEVNPFANPGSVPAASNSRLSPLPPEPAGFG--YGRTVDIPLDRPGSGAQDLKKKEKELQAKEADLRRREQDLKRKQDAAARAGIVIEAKNWPTFFPLIHHDIANEILVRLQRLQYIAFATYLGLVLALFWNIIAVTTAWIKGE 155 The following BLAST results are available for this feature:
BLAST of FC930693 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930693 ID=FC930693; Name=FC930693; organism=Citrus clementina; type=EST; length=698bpback to top |