FC930716

Overview
NameFC930716
Unique NameFC930716
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length704
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14110 contig Ccv1_Contig14110:1..704. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930716 vs. ExPASy Swiss-Prot
Match: CNGT2_ARATH (Cytokinin-N-glucosyltransferase 2 OS=Arabidopsis thaliana GN=UGT76C2 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.298e-40
Identity = 91/214 (42.52%), Postives = 124/214 (57.94%), Query Frame = 2
Query:   62 QQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSPNPSNYPHFTFCSIQDGLSETEASTTDFVALISVLHVKCAAPFQDCLAKLLSNAEEKEEEPIACLITDASWFFTHDVAESLKXXXXXXXXXXXXXXXXXXXXXXXXQKGYFPIQDSHDLEAPVPELPPLRMKDIPVIETLYQETLHQFAAEAINQMKASSGCIWNSVXE 703
            +++ G R+ILFPLP QG INPMLQLANIL+ +GFSIT+IHT+FN+P  S++P FTF  I DGLSETE      ++L++ +++   +PF+DCL K+L   E KE E + CLI D  W FT  V+ESLK                         KGY P+ +S + E  VPE PPL+ +D+  +   + E L  F    +     SSG I+ S  E
Sbjct:    3 EKRNGLRVILFPLPLQGCINPMLQLANILHVRGFSITVIHTRFNAPKASSHPLFTFLQIPDGLSETEIQ-DGVMSLLAQINLNAESPFRDCLRKVL--LESKESERVTCLIDDCGWLFTQSVSESLKLPRLVLCTFKATFFNAYPSLPLIRTKGYLPVSES-EAEDSVPEFPPLQKRDLSKVFGEFGEKLDPFLHAVVETTIRSSGLIYMSCEE 212          
BLAST of FC930716 vs. ExPASy Swiss-Prot
Match: CNGT1_ARATH (Cytokinin-N-glucosyltransferase 1 OS=Arabidopsis thaliana GN=UGT76C1 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.140e-39
Identity = 88/219 (40.18%), Postives = 130/219 (59.36%), Query Frame = 2
Query:   59 MQQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSPNPSNYPHFTFCSIQDGLSETEASTTDFVALISVLHVKCAAPFQDCLAKLLSNAEEK--EEEPIACLITDASWFFTHDVAESLKXXXXXXXXXXXXXXXXXXXXXXXXQKGYFPIQDSHDLEAPVPELPPLRMKDIPVI--ETLYQETLHQFAAEAINQMKASSGCIWNSVXE 703
            M+++  R++ILFPLP QG INPMLQLA ILYS+GFSITIIHT+FN+P  S++P FTF  I+DGLSE++  + D +  +++L+  C  PF++CLAKL+  + +   E+  I+C+I D+ W FT  VAES                          ++G+ P+ DS + +  VPE PPLR KD+  I   +   + L  +  + ++  K +SG I  S  E
Sbjct:    1 MEKRNERQVILFPLPLQGCINPMLQLAKILYSRGFSITIIHTRFNAPKSSDHPLFTFLQIRDGLSESQTQSRDLLLQLTLLNNNCQIPFRECLAKLIKPSSDSGTEDRKISCVIDDSGWVFTQSVAESFNLPRFVLCAYKFSFFLGHFLVPQIRREGFLPVPDS-EADDLVPEFPPLRKKDLSRIMGTSAQSKPLDAYLLKILDATKPASGIIVMSCKE 218          
BLAST of FC930716 vs. ExPASy Swiss-Prot
Match: COGT2_ARATH (Cytokinin-O-glucosyltransferase 2 OS=Arabidopsis thaliana GN=UGT85A1 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.472e-18
Identity = 66/238 (27.73%), Postives = 108/238 (45.38%), Query Frame = 2
Query:   44 LGESHMQQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFN---------SPNPSNYPHFTFCSIQDGLSETEA-STTDFVALISVLHVKCAAPFQDCLAKLLSNAEEKEEEPIACLITDASWFFTHDVAESLKXXXXXXXXXXXXXXXXXXXXXXXXQKGYFPIQDSHDLEAP---------VPELPPLRMKDIP--VIETLYQETLHQFAAEAINQMKASSGCIWNS 694
            +G   +   +   ++  P P QGHINPM+++A +L+++GF +T ++T +N         S      P F F SI DGL ET+  +T D  AL       C APF++ L ++  NA +    P++C+++D    FT DVAE L                         +KG  P++D   L            +P +  +++KDIP  +  T   + +  FA     + K +S  I N+
Sbjct:    1 MGSQIIHNSQKPHVVCVPYPAQGHINPMMRVAKLLHARGFYVTFVNTVYNHNRFLRSRGSNALDGLPSFRFESIADGLPETDMDATQDITALCESTMKNCLAPFRELLQRI--NAGD-NVPPVSCIVSDGCMSFTLDVAEELGVPEVLFWTTSGCAFLAYLHFYLFIEKGLCPLKDESYLTKEYLEDTVIDFIPTMKNVKLKDIPSFIRTTNPDDVMISFALRETERAKRASAIILNT 235          
The following BLAST results are available for this feature:
BLAST of FC930716 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
CNGT2_ARATH2.298e-4042.52Cytokinin-N-glucosyltransferase 2 OS=Arabidopsis t... [more]
CNGT1_ARATH1.140e-3940.18Cytokinin-N-glucosyltransferase 1 OS=Arabidopsis t... [more]
COGT2_ARATH2.472e-1827.73Cytokinin-O-glucosyltransferase 2 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionC34010E07EF PostHarvC1 Citrus clementina cDNA clone C34010E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930716 ID=FC930716; Name=FC930716; organism=Citrus clementina; type=EST; length=704bp
GGACACAACAGAGCAAAGCCAAAAACAAGATTCAATGGAGAACCTCGGAG
AGTCTCACATGCAACAAAAGAAAGGAAGAAGATTGATACTCTTTCCGCTG
CCTTTTCAAGGCCACATAAACCCAATGCTTCAGCTTGCAAACATTCTCTA
TTCAAAAGGCTTTTCAATCACCATAATCCACACCAAATTCAACTCCCCGA
ATCCCTCAAACTACCCTCACTTCACCTTCTGTTCAATCCAAGACGGCTTG
TCAGAAACTGAAGCCTCTACCACGGATTTTGTGGCCCTTATTTCAGTACT
GCATGTTAAGTGTGCTGCGCCATTTCAGGATTGCTTGGCCAAGTTGCTGT
CAAATGCTGAGGAGAAGGAAGAAGAGCCTATTGCTTGCTTAATCACAGAT
GCTAGTTGGTTCTTCACTCATGATGTTGCTGAAAGCCTAAAGCTCCCCAG
GATTGTGTTAAGGAGTCTCAGTGTCTCTTCCTCTCTTGTTTATGCTGCCT
TACCAGTTCTAAGCCAAAAGGGTTACTTTCCCATACAAGATTCTCATGAT
TTGGAAGCCCCAGTGCCAGAGCTTCCGCCTCTAAGAATGAAAGACATTCC
TGTCATTGAAACGCTTTATCAAGAGACACTGCATCAATTTGCAGCAGAAG
CAATCAATCAGATGAAGGCTTCCTCAGGATGCATATGGAATTCAGTTCAN
GAAC
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