FC930739
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930739 vs. ExPASy Swiss-Prot
Match: CTNS_ARATH (Cystinosin homolog OS=Arabidopsis thaliana GN=At5g40670 PE=2 SV=1) HSP 1 Score: 327.02 bits (837), Expect = 7.038e-89 Identity = 151/209 (72.25%), Postives = 182/209 (87.08%), Query Frame = 3 Query: 51 MVSWNSVPLEITYQVLGWISFVAWSVSFYPQVILNFRRKSVVGLNFDFVLLNLTKHSSYMIYNVVLFFSSTVQQQYFQKYGRDQMIPVAANDVAFSMHAVLLTIITLFQIAIYERGVQKVSKISMAIVSVVWLAAAVCFFVALPNHSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRKSTDGFSIGNILLDFLGGCTNYSQMIVQSIDQ 677 M SWNS+PLEI+Y+++GWI+F +WS+SFYPQ+ILNFRR+SVVGLNFDFV+LNLTKHSSYMIYNV L+FS +Q+QYF YG +MIPVAANDVAFS+HAV++T +TLFQI IYERG QKVS++++ IV VVW AA+CFF+ALP HSWLWLI+ FN+IQV MT +KYIPQA MNF RKST G+SIGNILLDF GG NY QM++QSIDQ Sbjct: 1 MASWNSIPLEISYEIVGWIAFASWSISFYPQLILNFRRRSVVGLNFDFVMLNLTKHSSYMIYNVCLYFSPVIQKQYFDTYGDKEMIPVAANDVAFSIHAVVMTAVTLFQIFIYERGPQKVSRLAIGIVVVVWGFAAICFFIALPTHSWLWLISIFNSIQVFMTCVKYIPQAKMNFTRKSTVGWSIGNILLDFTGGLANYLQMVIQSIDQ 209
BLAST of FC930739 vs. ExPASy Swiss-Prot
Match: CTNS_DICDI (Cystinosin homolog OS=Dictyostelium discoideum GN=ctns PE=3 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 8.986e-52 Identity = 93/201 (46.27%), Postives = 141/201 (70.15%), Query Frame = 3 Query: 75 LEITYQVLGWISFVAWSVSFYPQVILNFRRKSVVGLNFDFVLLNLTKHSSYMIYNVVLFFSSTVQQQYFQKYGRDQMIPVAANDVAFSMHAVLLTIITLFQIAIYERGVQKVSKISMAIVSVVWLAAAVCFFVALPN-HSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRKSTDGFSIGNILLDFLGGCTNYSQMIVQSID 674 L I ++GWI F WS+SFYPQVILNFR+K+V+GL+FDF+L N+T ++ Y ++N VL+F V+ +Y+ KYG IPV +D+AF++H +LT IT+ Q IY+RG QK SK+ + I +++W++ V + N +WLW+IN+++ +++ +T IKYIPQA +NF+ KST G+S+ N+LLDF GG + QM + D Sbjct: 4 LSIISIIIGWIYFACWSLSFYPQVILNFRKKNVIGLSFDFLLFNITGYACYSVFNSVLYFDKLVKNEYYDKYG--PPIPVQQSDIAFAIHGFVLTAITIIQCFIYDRGNQKNSKLGIGIATLIWVSLIVMTILGFSNVFTWLWVINYYSYVKLFITFIKYIPQAYLNFKNKSTSGWSVHNVLLDFSGGVLSLLQMFLDVAD 202
BLAST of FC930739 vs. ExPASy Swiss-Prot
Match: CTNS_HUMAN (Cystinosin OS=Homo sapiens GN=CTNS PE=1 SV=2) HSP 1 Score: 193.356 bits (490), Expect = 1.214e-48 Identity = 100/202 (49.50%), Postives = 141/202 (69.80%), Query Frame = 3 Query: 66 SVPLEITYQVLGWISFVAWSVSFYPQVILNFRRKSVVGLNFDFVLLNLTKHSSYMIYNVVLFFSSTVQQQYFQKYGRDQMIPVAANDVAFSMHAVLLTIITLFQIAIYERGVQKVSKISMAIVSVVWLAAAVCFFVALPN-HSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRKSTDGFSIGNILLDFLGGCTNYSQMIVQS 668 S + I QV+GWI FVAWS+SFYPQVI+N+RRKSV+GL+FDFV LNLT +Y ++N+ L + +++Q+ KY + + PV +NDV FS+HAV+LT+I + Q +YERG Q+VS ++ + + WL A V VA +WL + F+ I++ +TL+KY PQA MNF KST+G+SIGN+LLDF GG + QM +QS Sbjct: 120 SSAISIINQVIGWIYFVAWSISFYPQVIMNWRRKSVIGLSFDFVALNLTGFVAYSVFNIGLLWVPYIKEQFLLKY-PNGVNPVNSNDVFFSLHAVVLTLIIIVQCCLYERGGQRVSWPAIGFLVLAWLFAFVTMIVAAVGVTTWLQFLFCFSYIKLAVTLVKYFPQAYMNFYYKSTEGWSIGNVLLDFTGGSFSLLQMFLQS 320
BLAST of FC930739 vs. ExPASy Swiss-Prot
Match: CTNS_BOVIN (Cystinosin OS=Bos taurus GN=CTNS PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.214e-48 Identity = 97/199 (48.74%), Postives = 142/199 (71.36%), Query Frame = 3 Query: 75 LEITYQVLGWISFVAWSVSFYPQVILNFRRKSVVGLNFDFVLLNLTKHSSYMIYNVVLFFSSTVQQQYFQKYGRDQMIPVAANDVAFSMHAVLLTIITLFQIAIYERGVQKVSKISMAIVSVVWLAAAVCFFV-ALPNHSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRKSTDGFSIGNILLDFLGGCTNYSQMIVQS 668 + I QV+GWI FVAWSVSFYPQVI N+RRKSVVGL+FDFV+LNL +Y ++N+ LF+ ++++Q+ KY + + PV +NDV FS+HAV LT++ + Q +YERG Q+VS ++++ + + WL + + A+ +WL + F+ I++ +TL+KY PQA MNF KST+G+SIGN+LLDF GG + QM +QS Sbjct: 123 VSIINQVIGWIYFVAWSVSFYPQVITNWRRKSVVGLSFDFVVLNLMGFVAYSVFNIGLFWVPSIKEQFLLKY-PNGVNPVDSNDVFFSLHAVALTLVVIVQCLLYERGSQRVSWLAISFLVLSWLFTLIALIMAAVGATTWLQFLFCFSYIKLAVTLVKYFPQAYMNFHYKSTEGWSIGNVLLDFTGGSFSLLQMFLQS 320
BLAST of FC930739 vs. ExPASy Swiss-Prot
Match: CTNS_MOUSE (Cystinosin OS=Mus musculus GN=Ctns PE=1 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.137e-46 Identity = 98/199 (49.25%), Postives = 135/199 (67.84%), Query Frame = 3 Query: 75 LEITYQVLGWISFVAWSVSFYPQVILNFRRKSVVGLNFDFVLLNLTKHSSYMIYNVVLFFSSTVQQQYFQKYGRDQMIPVAANDVAFSMHAVLLTIITLFQIAIYERGVQKVSKISMAIVSVVWLAAAVCFFVALPN-HSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRKSTDGFSIGNILLDFLGGCTNYSQMIVQS 668 + I QV+GWI F+AWSVSFYPQVI N+RRKSV+GL+FDF+ LNLT +Y ++N+ L + +Q+++ KY + + PV +ND FS+HAV LT+I + Q +YERG Q+VS S+ + + WL V VA +WL + F+ I++I+TLIKY PQA MNF KST G+SIG +LLDF GG + QM +QS Sbjct: 123 VSIINQVIGWIYFMAWSVSFYPQVIQNWRRKSVIGLSFDFLALNLTGFVAYSVFNIGLLWVPYIQEEFLLKY-PNGVNPVDSNDAFFSLHAVALTLIVILQCCLYERGNQRVSWPSIGFLVLAWLFVLVTMIVAAVGITTWLQFLFCFSYIKLIITLIKYFPQAYMNFYYKSTKGWSIGGVLLDFTGGSFSLLQMFLQS 320
BLAST of FC930739 vs. ExPASy Swiss-Prot
Match: CTNS_DROME (Cystinosin homolog OS=Drosophila melanogaster GN=CG17119 PE=1 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 6.455e-42 Identity = 89/195 (45.64%), Postives = 127/195 (65.13%), Query Frame = 3 Query: 93 VLGWISFVAWSVSFYPQVILNFRRKSVVGLNFDFVLLNLTKHSSYMIYNVVLFFSSTVQQQYFQKYGRDQMIPVAANDVAFSMHAVLLTIITLFQIAIYERGVQKVSKISMAIVSVVWLAAAVCFFVALPNHS---WLWLINFFNAIQVIMTLIKYIPQAIMNFRRKSTDGFSIGNILLDFLGGCTNYSQMIVQS 668 + GW+ FVAWSVSFYPQ+ N+RRKSV GLNFDF+ LN+ + Y ++N L+F +Q +Y +Y + PV NDV FS+HA+ T IT+ Q Y+R Q+VS I+ I+++ A V L S WL + + + +++ +T+IKY+PQA+MN+RRKST G+SIGNILLDF GG + QMI+ + Sbjct: 134 IFGWVYFVAWSVSFYPQIWSNYRRKSVEGLNFDFLALNIVGFTLYSMFNCGLYFIEDLQNEYEVRYPLG-VNPVMLNDVVFSLHAMFATCITILQCFFYQRAQQRVSFIAYGILAI--FAVVVVVSAGLAGGSVIHWLDFLYYCSYVKLTITIIKYVPQALMNYRRKSTSGWSIGNILLDFTGGTLSMLQMILNA 325
BLAST of FC930739 vs. ExPASy Swiss-Prot
Match: CTNS_CAEBR (Cystinosin homolog OS=Caenorhabditis briggsae GN=ctns-1 PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.346e-39 Identity = 87/201 (43.28%), Postives = 126/201 (62.69%), Query Frame = 3 Query: 75 LEITYQVLGWISFVAWSVSFYPQVILNFRRKSVVGLNFDFVLLNLTKHSSYMIYNVVLFFSSTVQQQYFQKYGRDQMIPVAANDVAFSMHAVLLTIITLFQIAIYERGVQKVS-KISMAIVSVVWLAAAVCFFVALPNHSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRKSTDGFSIGNILLDFLGGCTNYSQMIVQSID 674 L I Q++GW F AWSVSFYPQ+ LNF+RKSVVGLNFDF+ LNL +Y ++N++++++S V+ Y + R PV NDV F++HA L +T+ Q YER Q++S K + I+ +V L + L + + I++ +T KY PQA N++RKST G+SIGNILLDF GG + QM++Q+I+ Sbjct: 124 LAILIQIVGWTYFAAWSVSFYPQMYLNFKRKSVVGLNFDFLSLNLVGFGAYAMFNLLMYYNSHVKNIYSMENPRSPP-PVLLNDVVFAVHAFLACFVTILQCIFYERDQQRISTKCIILIIGLVSFGFVSVVVTVLNKITILDFVVSLSYIKMAVTCCKYFPQAYFNYQRKSTVGWSIGNILLDFTGGSLDILQMVLQAIN 323
BLAST of FC930739 vs. ExPASy Swiss-Prot
Match: CTNS_CAEEL (Cystinosin homolog OS=Caenorhabditis elegans GN=ctns-1 PE=2 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 2.296e-39 Identity = 89/202 (44.06%), Postives = 127/202 (62.87%), Query Frame = 3 Query: 75 LEITYQVLGWISFVAWSVSFYPQVILNFRRKSVVGLNFDFVLLNLTKHSSYMIYNVVLFFSSTVQQQYFQKYGRDQMIPVAANDVAFSMHAVLLTIITLFQIAIYERGVQKVSKISMAIVSVVWLAAAVCFFVA--LPNHSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRKSTDGFSIGNILLDFLGGCTNYSQMIVQSID 674 L I Q++GW F AWS+SFYPQ+ LNF+RKSVVGLNFDF+ LNL +Y I+N++++++S V+ +Y R PV NDV F++HA L IT+ Q YER Q VS +A++ +V ++ C A L L + + I++ +T KY PQA N+ RKST G+SIGNI+LDF GG + QMI+Q+++ Sbjct: 125 LAILIQIVGWTYFFAWSISFYPQMYLNFKRKSVVGLNFDFLSLNLVGFCAYAIFNLLMYYNSHVKNEYNIVNPRSPP-PVLLNDVVFAVHAFLACFITILQCLFYERDNQSVSSKCIALM-IVLISFGFCSAAATVLRKIQLLSFVTSLSYIKMAVTCCKYFPQAYFNYTRKSTVGWSIGNIMLDFTGGTLDILQMILQAVN 324
BLAST of FC930739 vs. ExPASy Swiss-Prot
Match: ERS1_YEAST (Cystine transporter OS=Saccharomyces cerevisiae GN=ERS1 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.338e-14 Identity = 60/206 (29.13%), Postives = 97/206 (47.09%), Query Frame = 3 Query: 93 VLGWISFVAWSVSFYPQVILNFRRKSVVGLNFDFVLLNLTKHSSYMIYNVVLFFSSTVQQQYFQKYGRDQMIPVAANDVAFSMHAVLLTIITLFQIAIYER-------GVQKVSK-------ISMAIVSVVWLAAAVC-FFVALPNHSWLWLINFFNAIQVIMTLIKYIPQAIMNFRRKSTDGFSIGNILLDFLGGCTNYSQMIVQ 665 +LG + +WS+S YP +I N+R KS ++ DFV+LN T SY++ ++ L GR ++ D + +H L+ ++ L Q+ R G +K++ S+AI S++ + ++ N L N +++ M+LIKYIPQ N RKS D F I + LD GG + Q+I Q Sbjct: 7 ILGIVYVTSWSISMYPPIITNWRHKSASAISMDFVMLN-TAGYSYLVISIFLQLYCWKMTGDESDLGRPKLTQF---DFWYCLHGCLMNVVLLTQVVAGARIWRFPGKGHRKMNPWYLRILLASLAIFSLLTVQFMYSNYWYDWHNSRTLAYCNNLFLLKISMSLIKYIPQVTHNSTRKSMDCFPIQGVFLDVTGGIASLLQLIWQ 208 The following BLAST results are available for this feature:
BLAST of FC930739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930739 ID=FC930739; Name=FC930739; organism=Citrus clementina; type=EST; length=779bpback to top |