FC930790
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930790 vs. ExPASy Swiss-Prot
Match: RR5_SPIOL (30S ribosomal protein S5, chloroplastic OS=Spinacia oleracea GN=rps5 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.228e-21 Identity = 70/199 (35.18%), Postives = 93/199 (46.73%), Query Frame = 2 Query: 146 TPRLSFLSTAKLTRLPKLTLSTVLVRASESDKPN----------------------GIVFDDFNNPDEDAAVFXXXXXXXXXXXXXSFDELPMETEDEIAAAYEELYGPAYAGVSVLGNDVYVMDSKAKKTSAFG-ETKKEKVKDGFEEXXXXXXXXXXXXXXXXXLKFRAIXXXXXXXXXXXXXXXXXXESIAAVQKS 673 TP + L+T R+P +T L+ S S KP I F + +NPDE+ F + DE P E+E+EIA AYEELYG AY+G S+LGNDVY MDSK KK + FG ++KKEK++DGFEE ++FRAI E ++AVQK+ Sbjct: 8 TPSATSLTTLH-RRIPLFPTTTTLLSLSSSSKPLFLSLSSTRSFPTHLYCIKKDDIDITFFEQDNPDEEIT-FDPPEKPEGYIPPRAVDEPPFESEEEIALAYEELYGAAYSGESLLGNDVYAMDSKIKKATGFGSKSKKEKIRDGFEENVVQVRRVTKVVKGGKHMRFRAIVVVGDKKGQVGVGVGKAKEVVSAVQKA 204
BLAST of FC930790 vs. ExPASy Swiss-Prot
Match: RR5_ARATH (30S ribosomal protein S5, chloroplastic OS=Arabidopsis thaliana GN=rps5 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.056e-20 Identity = 65/159 (40.88%), Postives = 80/159 (50.31%), Query Frame = 2 Query: 206 STVLVRASESDKPNGIVFDDFNNPDEDAAVFXXXXXXXXXXXXXSFDELPMETEDEIAAAYEELYGPAYAGVSVLGNDVYVMDSKAKKTSAF-GETKKEKVKDGFEEXXXXXXXXXXXXXXXXXLKFRAIXXXXXXXXXXXXXXXXXXESIAAVQKSPL 679 S LV+AS +D I F+D VF FDE ETE+EIA A+EELYGPAY+G S+LG D+YVMDSK KK+S G+ KK+K++DGFEE LKFRAI E +AAVQKS + Sbjct: 44 SLTLVKASSTDTET-IFFEDETPEITANVVFDPPIAPEGFVSPPYFDEGSDETEEEIATAFEELYGPAYSGESMLGKDIYVMDSKHKKSSGIGGKPKKDKIRDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAI 201 The following BLAST results are available for this feature:
BLAST of FC930790 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930790 ID=FC930790; Name=FC930790; organism=Citrus clementina; type=EST; length=709bpback to top |