FC930911

Overview
NameFC930911
Unique NameFC930911
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14394 contig Ccv1_Contig14394:297..1012. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930911 vs. ExPASy Swiss-Prot
Match: TLP1_PYRPY (Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 1.783e-64
Identity = 112/187 (59.89%), Postives = 138/187 (73.80%), Query Frame = 3
Query:    3 TLNAPASWGGRMWARTLCSQDSTGKFTCVTGDCG-GKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPMLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGG--VACKSACEAFRQPQYCCNGAFSTPDTCKPSTYSQIFKSACPHAYSYAYDDKSSTFTCGSGPDYTITFCP 554
            +L   A W GR W R+ CS DS+GKF C TGDCG G++ C+G+GA+PPA+L E  L   GGQDFYDVSLVDG+NLP+ + P+GG G +C ST C  ++N  CP+EL   +D GS G  + CKSAC A  QPQYCC GA+ TPDTC P+ +S++FK+ CP AYSYAYDDKSSTFTC  GP+Y ITFCP
Sbjct:   62 SLTVQAPWSGRFWGRSHCSIDSSGKFKCSTGDCGSGQISCNGAGASPPASLVELTLATNGGQDFYDVSLVDGFNLPIKLAPRGGSG-DCNSTSCAANINTVCPAEL---SDKGSDGSVIGCKSACLALNQPQYCCTGAYGTPDTCPPTDFSKVFKNQCPQAYSYAYDDKSSTFTCFGGPNYEITFCP 244          
BLAST of FC930911 vs. ExPASy Swiss-Prot
Match: TLP_PRUAV (Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.669e-62
Identity = 111/184 (60.33%), Postives = 131/184 (71.20%), Query Frame = 3
Query:    6 LNAPASWGGRMWARTLCSQDSTGKFTCVTGDCG-GKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPMLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPDTCKPSTYSQIFKSACPHAYSYAYDDKSSTFTCGSGPDYTITFCP 554
            L+ P  W GR WART CS D++GKF C T DC  G++ C+G+GA PPATLAEF +   GGQDFYDVSLVDG+NLPM V PQGG G +C +  C  ++NA CPSEL+     GS  VAC SAC  F  PQYCC    +TP+TC P+ YS+IF +ACP AYSYAYDDK  TFTC  GP+Y ITFCP
Sbjct:   64 LDTPVPWNGRFWARTGCSTDASGKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTPQGGTG-DCKTASCPANVNAVCPSELQKKGSDGSV-VACLSACVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP 245          
BLAST of FC930911 vs. ExPASy Swiss-Prot
Match: TLP1_PRUPE (Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 8.283e-62
Identity = 109/185 (58.92%), Postives = 133/185 (71.89%), Query Frame = 3
Query:    3 TLNAPASWGGRMWARTLCSQDSTGKFTCVTGDCG-GKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPMLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPDTCKPSTYSQIFKSACPHAYSYAYDDKSSTFTCGSGPDYTITFCP 554
            +++AP+ W GR + RT CS D++GKFTC T DCG G++ C+G+GAAPPATL E  +   GGQDFYDVSLVDG+NLPM V PQGG G  C ++ C  D+N  CP+ L+V    GS  +ACKSAC AF QP+YCC      P+TC P  YS++FK+ CP AYSYAYDDKSSTFTC   P Y ITFCP
Sbjct:   64 SVDAPSPWSGRFFGRTRCSTDASGKFTCATADCGSGQVSCNGNGAAPPATLVEITIASNGGQDFYDVSLVDGFNLPMSVAPQGGTG-KCKASTCPADINKVCPAPLQVKGSDGSV-IACKSACLAFNQPKYCCTPPNDKPETCPPPDYSKLFKTQCPQAYSYAYDDKSSTFTCSGRPAYLITFCP 246          
BLAST of FC930911 vs. ExPASy Swiss-Prot
Match: TP1B_MALDO (Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.413e-61
Identity = 106/185 (57.30%), Postives = 133/185 (71.89%), Query Frame = 3
Query:    3 TLNAPASWGGRMWARTLCSQDSTGKFTCVTGDCG-GKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPMLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPDTCKPSTYSQIFKSACPHAYSYAYDDKSSTFTCGSGPDYTITFCP 554
            +++AP+ W GR W RT CS D+ GKF+C T DCG G++ C+G+GA PPATL E  +   GGQD+YDVSLVDG+NLPM V PQGG G  C  + C  ++N ACP++L+V    GS  ++CKSAC AF   +YCC     TP+TC P+ YS+IF+  CP AYSYAYDDK+STFTC  GPDY ITFCP
Sbjct:   30 SVDAPSPWSGRFWGRTRCSTDAAGKFSCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMSVAPQGGTG-ECKPSSCPANVNMACPAQLQVKAADGSV-ISCKSACLAFGDSKYCCTPPNDTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 212          
BLAST of FC930911 vs. ExPASy Swiss-Prot
Match: TP1A_MALDO (Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.410e-61
Identity = 106/185 (57.30%), Postives = 132/185 (71.35%), Query Frame = 3
Query:    3 TLNAPASWGGRMWARTLCSQDSTGKFTCVTGDCG-GKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPMLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPDTCKPSTYSQIFKSACPHAYSYAYDDKSSTFTCGSGPDYTITFCP 554
            +++AP+ W GR W RT CS D+ GKFTC T DCG G++ C+G+GA PPATL E  +   GGQD+YDVSLVDG+NLPM V PQGG G  C  + C  ++N  CP+ L+V    GS  ++CKSAC AF   +YCC    +TP+TC P+ YS+IF+  CP AYSYAYDDK+STFTC  GPDY ITFCP
Sbjct:   64 SVDAPSPWSGRFWGRTRCSTDAAGKFTCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMSVAPQGGTG-ECKPSSCPANVNKVCPAPLQVKAADGSV-ISCKSACLAFGDSKYCCTPPNNTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 246          
BLAST of FC930911 vs. ExPASy Swiss-Prot
Match: PR5_ARATH (Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 9.158e-61
Identity = 115/183 (62.84%), Postives = 132/183 (72.13%), Query Frame = 3
Query:    6 LNAPASWGGRMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPMLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPDTCKPSTYSQIFKSACPHAYSYAYDDKSSTFTCGSGPDYTITFCP 554
            L APA W GR WART C+ D++G   CVTGDCGG L C+G G  PP TLAEF L G GG+DFYDVSLVDGYN+ + + P GG G +C   GCV DLNAACP  LKVM       VACKSACE F   QYCC GA   P+TC P+ YS+IFK+ACP AYSYAYDD++STFTC +G +Y ITFCP
Sbjct:   63 LTAPAGWSGRFWARTGCNFDASGNGRCVTGDCGG-LRCNGGGV-PPVTLAEFTLVGDGGKDFYDVSLVDGYNVKLGIRPSGGSG-DCKYAGCVSDLNAACPDMLKVMDQNNV--VACKSACERFNTDQYCCRGANDKPETCPPTDYSRIFKNACPDAYSYAYDDETSTFTC-TGANYEITFCP 239          
BLAST of FC930911 vs. ExPASy Swiss-Prot
Match: TLP1_CASSA (Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.462e-58
Identity = 108/185 (58.38%), Postives = 128/185 (69.19%), Query Frame = 3
Query:    3 TLNAPASWGGRMWARTLCSQDSTGKFTCVTGDCG-GKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPMLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPDTCKPSTYSQIFKSACPHAYSYAYDDKSSTFTCGSGPDYTITFCP 554
            TL   A W GR WART C+ +S GKFTC T DC  G++ C+G+GA PPA+L E  +    G DFYDVSLVDGYNLP+ V  +GG G +C +T C  ++NA CP+EL+V     S  +ACKSAC AF QPQYCC GAF T  TC  + YS+IFK  CP AYSYAYDD +STFTC   PDY ITFCP
Sbjct:   62 TLGVQAPWKGRFWARTRCTTNS-GKFTCETADCSTGQVACNGNGAIPPASLVEINIAANRGMDFYDVSLVDGYNLPVSVATRGGTG-DCKATSCRANVNAVCPAELQVKGSDASV-LACKSACTAFNQPQYCCTGAFDTARTCPATKYSRIFKQQCPQAYSYAYDDSTSTFTCSGAPDYVITFCP 243          
BLAST of FC930911 vs. ExPASy Swiss-Prot
Match: TLP2_PRUPE (Thaumatin-like protein 2 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 6.143e-57
Identity = 104/184 (56.52%), Postives = 120/184 (65.22%), Query Frame = 3
Query:    6 LNAPASWGGRMWARTLCSQDSTGKFTCVTGDC-GGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPMLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPDTCKPSTYSQIFKSACPHAYSYAYDDKSSTFTCGSGPDYTITFCP 554
            L+ P  W GR WART CS D++GKF C T DC  G+L C+G    PPATLAEF +   GGQDFYDVSLVDG+NLPM V PQGG G  C    C  ++N  CPSEL+ +   GS  VAC SAC  F +PQYCC     T + C P+ YSQIF   CP AYSYA+DD    FTC  GP+Y ITFCP
Sbjct:   61 LDTPVPWSGRFWARTRCSTDASGKFVCETADCDSGQLMCNGKTGIPPATLAEFTIAAGGGQDFYDVSLVDGFNLPMSVTPQGGTG-TCKMGSCAANVNLVCPSELQKIGSDGSV-VACLSACVKFGEPQYCCTPPQETKEKCPPTNYSQIFHEQCPDAYSYAFDDNKGLFTCSGGPNYLITFCP 242          
BLAST of FC930911 vs. ExPASy Swiss-Prot
Match: TLPH_ARATH (Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 7.509e-55
Identity = 103/184 (55.98%), Postives = 120/184 (65.22%), Query Frame = 3
Query:    3 TLNAPASWGGRMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDFYDVSLVDGYNLPMLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVACKSACEAFRQPQYCCNGAFSTPDTCKPSTYSQIFKSACPHAYSYAYDDKSSTFTCGSGPDYTITFCP 554
            +L  P  W GR W R  C+ D +G+  C TGDCGG L C+G+G  PPATLAE  L      DFYDVSLVDGYNL M ++P  G G  C+  GCV DLN  CP  L+V +  G   VACKSAC AF  PQYCC G F  P +CKP+ YS+IFK ACP AYSYAYDD +S  TC S  +Y +TFCP
Sbjct:   60 SLQLPPLWSGRFWGRHGCTFDRSGRGHCATGDCGGSLSCNGAGGEPPATLAEITLGPE--LDFYDVSLVDGYNLAMSIMPVKGSG-QCSYAGCVSDLNQMCPVGLQVRSRNGKRVVACKSACSAFNSPQYCCTGLFGNPQSCKPTAYSKIFKVACPKAYSYAYDDPTSIATC-SKANYIVTFCP 239          
BLAST of FC930911 vs. ExPASy Swiss-Prot
Match: OLP1_SOLLC (Osmotin-like protein OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.878e-46
Identity = 90/181 (49.72%), Postives = 116/181 (64.09%), Query Frame = 3
Query:   18 ASWGGRMWARTLCSQDSTGKFTCVTGDCGGKLECSGSGAAPPATLAEFKLDGYGGQDF--YDVSLVDGYNLPMLVVPQGGDGPNCTSTGCVVDLNAACPSELKVMTDGGSGGVA-CKSACEAFRQPQYCCNGAFSTPDTCKPSTYSQIFKSACPHAYSYAYDDKSSTFTCGSGPDYTITFC 551
            A W GR+WART C+    GKF C TGDCGG++EC G G A PATLA+F L  +G  DF  Y VSLVDG+N+P+ V P  G G  C   GC  +L  +CP+ L+  + GG G V  CKSACEAF+  ++CC   +++P TCKPS+YSQ FK ACP  ++YA+D  S    C S  +  + FC
Sbjct:   74 AHWSGRIWARTGCNYQH-GKFYCATGDCGGRIECDGLGGAAPATLAQFVLH-HGHADFSTYGVSLVDGFNIPLTVTPHEGKGV-CPVVGCRANLLESCPAVLQFRSHGGHGPVVGCKSACEAFKSDEFCCRNHYNSPQTCKPSSYSQFFKHACPATFTYAHDSPSLMHECSSPRELKVIFC 251          
The following BLAST results are available for this feature:
BLAST of FC930911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
TLP1_PYRPY1.783e-6459.89Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1... [more]
TLP_PRUAV1.669e-6260.33Glucan endo-1,3-beta-glucosidase OS=Prunus avium P... [more]
TLP1_PRUPE8.283e-6258.92Thaumatin-like protein 1 OS=Prunus persica PE=2 SV... [more]
TP1B_MALDO1.413e-6157.30Thaumatin-like protein 1b (Fragment) OS=Malus dome... [more]
TP1A_MALDO2.410e-6157.30Thaumatin-like protein 1a OS=Malus domestica GN=TL... [more]
PR5_ARATH9.158e-6162.84Pathogenesis-related protein 5 OS=Arabidopsis thal... [more]
TLP1_CASSA1.462e-5858.38Thaumatin-like protein 1 OS=Castanea sativa GN=TL1... [more]
TLP2_PRUPE6.143e-5756.52Thaumatin-like protein 2 OS=Prunus persica PE=2 SV... [more]
TLPH_ARATH7.509e-5555.98Thaumatin-like protein OS=Arabidopsis thaliana GN=... [more]
OLP1_SOLLC4.878e-4649.72Osmotin-like protein OS=Solanum lycopersicum PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionC34110D04EF PostHarvP1 Citrus clementina cDNA clone C34110D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930911 ID=FC930911; Name=FC930911; organism=Citrus clementina; type=EST; length=716bp
AGACCCTCAACGCACCCGCTTCGTGGGGCGGCCGCATGTGGGCCAGAACA
CTCTGCTCCCAGGACTCCACCGGTAAGTTCACCTGCGTCACAGGTGATTG
CGGCGGCAAGCTGGAATGCTCCGGCAGTGGTGCTGCCCCGCCCGCCACTC
TTGCTGAGTTCAAGCTCGATGGCTATGGTGGCCAAGACTTCTATGATGTC
AGTTTGGTCGACGGCTACAACCTCCCCATGCTTGTCGTTCCTCAGGGTGG
TGACGGACCCAATTGTACAAGCACGGGATGCGTTGTCGACTTGAACGCCG
CGTGTCCTTCGGAGCTTAAGGTTATGACCGACGGTGGCAGCGGAGGTGTT
GCTTGCAAGAGCGCGTGCGAAGCCTTTAGGCAGCCGCAGTACTGTTGTAA
TGGCGCGTTTAGTACTCCCGATACATGCAAGCCATCTACTTATTCTCAGA
TCTTCAAAAGCGCGTGTCCTCACGCTTACAGCTATGCGTACGATGACAAA
TCCAGCACCTTTACATGCGGTTCGGGGCCCGACTACACCATAACCTTCTG
TCCTTCCCCCAACACCAGCCAGAAATCCTCACAAGGTGGAAACAGTGGAA
GCAATGCGCCCAACACAGGGACCATCGATAGCACAATGGTGTACGAAGGT
GCGTTGGAACCAAGCAGCGCGTCACCTTCACGTATACTACGTGCTGGGAT
CGCATGGCAATGGCAT
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