FC930963
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930963 vs. ExPASy Swiss-Prot
Match: SPTC2_HUMAN (Serine palmitoyltransferase 2 OS=Homo sapiens GN=SPTLC2 PE=1 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.241e-56 Identity = 111/223 (49.78%), Postives = 150/223 (67.26%), Query Frame = 1 Query: 1 SMEGELCKFPEXXXXXXXXXXXXXLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXXLLLARARICISASHTKEDLIKALEVISRVGDLVGINTSQ 669 SMEG + + PE LDEAHSIGA+G TGRGV E +D DVD+MMGTFTKSFG+ GGYI G KELI YL+ + +YATS+SPP EQII+++K I+G+DG+S G + + ++ EN+ +FR L++MGF + G+ DSPV+P+MLY PAKI AF RE L++N ++ +RAR C+SA+HTKE L AL+ I VGDL+ + S+ Sbjct: 319 SMEGSIVRLPEVIALKKKYKAYLYLDEAHSIGALGPTGRGVVEYFGLDPEDVDVMMGTFTKSFGASGGYIGGKKELIDYLRTHSHSAVYATSLSPPVVEQIITSMKCIMGQDGTSLGKECVQQLAENTRYFRRRLKEMGFIIYGNEDSPVVPLMLYMPAKIGAFGREMLKRNIGVVVVGFPATPIIESRARFCLSAAHTKEILDTALKEIDEVGDLLQLKYSR 541
BLAST of FC930963 vs. ExPASy Swiss-Prot
Match: SPTC2_MOUSE (Serine palmitoyltransferase 2 OS=Mus musculus GN=Sptlc2 PE=2 SV=2) HSP 1 Score: 216.468 bits (550), Expect = 1.051e-55 Identity = 109/223 (48.88%), Postives = 150/223 (67.26%), Query Frame = 1 Query: 1 SMEGELCKFPEXXXXXXXXXXXXXLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXXLLLARARICISASHTKEDLIKALEVISRVGDLVGINTSQ 669 SMEG + + PE LDEAHSIGA+G +GRGV + +D DVD+MMGTFTKSFG+ GGYI G KELI YL+ + +YATS+SPP EQII+++K I+G+DG+S G + + ++ EN+ +FR L++MGF + G+ DSPV+P+MLY PAKI AF RE L++N ++ +RAR C+SA+HTKE L AL+ I VGDL+ + S+ Sbjct: 317 SMEGSIVRLPEVIALKKKYKAYLYLDEAHSIGALGPSGRGVVDYFGLDPEDVDVMMGTFTKSFGASGGYIGGKKELIDYLRTHSHSAVYATSMSPPVMEQIITSMKCIMGQDGTSLGKECIQQLAENTRYFRRRLKEMGFIIYGNEDSPVVPLMLYMPAKIGAFGREMLKRNIGVVVVGFPATPIIESRARFCLSAAHTKEILDTALKEIDEVGDLLQLKYSR 539
BLAST of FC930963 vs. ExPASy Swiss-Prot
Match: SPTC2_DICDI (Serine palmitoyltransferase 2 OS=Dictyostelium discoideum GN=sptB PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.341e-55 Identity = 104/217 (47.93%), Postives = 146/217 (67.28%), Query Frame = 1 Query: 1 SMEGELCKFPEXXXXXXXXXXXXXLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXXLLLARARICISASHTKEDLIKALEVISRVGDLV 651 SMEGE+ PE +DEAHSIGA+GKTGRG+ + +D ++DI+MGT+TKSFG+ GGY+A K LI +L+ + + +YA S+SP A Q + A++VI+GEDG+ GA+KL ++ +NSN+FR ++++MGF +LG+ DSPV+P+ML+NPAK+ AFSR CL ++ L R R CISASHT EDL AL I +GDL+ Sbjct: 261 SMEGEVANLPEILAIKKKYKCYLYIDEAHSIGALGKTGRGIVDYYGIDPKEIDILMGTYTKSFGAIGGYVASDKSLIDHLRQSSFSQVYANSMSPVCAVQALEALRVIMGEDGTDTGAKKLKQLHDNSNYFREKIREMGFVILGNKDSPVIPLMLFNPAKLSAFSRLCLEKHIAVVVVGYPATPLTEPRTRFCISASHTIEDLDWALRQIDEIGDLI 477
BLAST of FC930963 vs. ExPASy Swiss-Prot
Match: SPTC2_CRIGR (Serine palmitoyltransferase 2 OS=Cricetulus griseus GN=SPTLC2 PE=2 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 6.811e-55 Identity = 108/223 (48.43%), Postives = 149/223 (66.82%), Query Frame = 1 Query: 1 SMEGELCKFPEXXXXXXXXXXXXXLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXXLLLARARICISASHTKEDLIKALEVISRVGDLVGINTSQ 669 SMEG + + PE LDEAHSIGA+G +GRGV + +D DVD+MMGTFTKSFG+ GGYI G K LI YL+ + +YATS+SPP EQII+++K I+G+DG+S G + + ++ EN+ +FR L++MGF + G+ DSPV+P+MLY PAKI AF RE L++N ++ +RAR C+SA+HTKE L AL+ I VGDL+ + S+ Sbjct: 317 SMEGSIVRLPEVIALKKKYKAYLYLDEAHSIGALGPSGRGVVDYFGLDPEDVDVMMGTFTKSFGASGGYIGGKKALIDYLRTHSHSAVYATSMSPPVMEQIITSMKCIMGQDGTSLGKECVQQLAENTKYFRRRLKEMGFIIYGNEDSPVVPLMLYMPAKIGAFGREMLKRNVGVVVVGFPATPIIESRARFCLSAAHTKEILDTALKEIDEVGDLLQLKYSR 539
BLAST of FC930963 vs. ExPASy Swiss-Prot
Match: SPTC3_HUMAN (Serine palmitoyltransferase 3 OS=Homo sapiens GN=SPTLC3 PE=1 SV=3) HSP 1 Score: 201.445 bits (511), Expect = 3.498e-51 Identity = 98/223 (43.95%), Postives = 146/223 (65.47%), Query Frame = 1 Query: 1 SMEGELCKFPEXXXXXXXXXXXXXLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXXLLLARARICISASHTKEDLIKALEVISRVGDLVGINTSQ 669 SMEG + P+ +DEAHSIGAVG TGRGV E +D +VD++MGTFTKSFG+ GGYIAG K+L+ YL+ + +YA+S+SPP AEQII ++K+I+G DG+++G Q++ ++ +N+ +FR LQ+MGF + G+ ++ V+P++LY P K+ AF+R L + L ARAR C+SA+HT+E L LE + +GDL+ + S+ Sbjct: 311 SMEGSIVHLPQIIALKKKYKAYLYIDEAHSIGAVGPTGRGVTEFFGLDPHEVDVLMGTFTKSFGASGGYIAGRKDLVDYLRVHSHSAVYASSMSPPIAEQIIRSLKLIMGLDGTTQGLQRVQQLAKNTRYFRQRLQEMGFIIYGNENASVVPLLLYMPGKVAAFARHMLEKKIGVVVVGFPATPLAEARARFCVSAAHTREMLDTVLEALDEMGDLLQLKYSR 533
BLAST of FC930963 vs. ExPASy Swiss-Prot
Match: LCB2_YEAST (Serine palmitoyltransferase 2 OS=Saccharomyces cerevisiae GN=LCB2 PE=1 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 4.425e-46 Identity = 98/222 (44.14%), Postives = 134/222 (60.36%), Query Frame = 1 Query: 1 SMEGELCKFPEXXXXXXXXXXXXXLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXXLLLARARICISASHTKEDLIKALEVISRVGDLVGINTS 666 SMEG LC P+ +DEAHSIGA+G TGRGVCE+ VD DVDI+MGTFTKSFG+ GGYIA + +I L+ Y+ S+ P Q IS+++ I GE +G ++L RI NS + R LQ++GF V G DSPV+P++LY P+K+PAFSR L++ L+ +R R C+SAS TKED+ L +S VGD + + ++ Sbjct: 306 SMEGTLCNLPKLVELKKKYKCYLFIDEAHSIGAMGPTGRGVCEIFGVDPKDVDILMGTFTKSFGAAGGYIAADQWIIDRLRLDLTTVSYSESMPAPVLAQTISSLQTISGEICPGQGTERLQRIAFNSRYLRLALQRLGFIVYGVADSPVIPLLLYCPSKMPAFSRMMLQRRIAVVVVAYPATPLIESRVRFCMSASLTKEDIDYLLRHVSEVGDKLNLKSN 527
BLAST of FC930963 vs. ExPASy Swiss-Prot
Match: SPTC3_MOUSE (Serine palmitoyltransferase 3 OS=Mus musculus GN=Sptlc3 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.196e-45 Identity = 90/219 (41.10%), Postives = 134/219 (61.19%), Query Frame = 1 Query: 1 SMEGELCKFPEXXXXXXXXXXXXXLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXXLLLARARICISASHTKEDLIKALEVISRVGDLVGI 657 SMEG + + +DEAHSIG G TGRGV EL +D D+D+ MGTFTKSF GGYI G KE++ YL+ + YATS+SP A Q+I ++K+ +G +G+ G +++ +++EN +FR L++MGF + G++ SPV+P++LY PAK+ AFSR L++ L RAR +S++HT+E L LEV+ +GDL+ + Sbjct: 311 SMEGSIVNLAQIVALKKKYKAYLYIDEAHSIGCTGPTGRGVRELFGLDPEDIDVYMGTFTKSFSGSGGYIGGKKEIVDYLRMQSHSTTYATSMSPVVAAQLIRSLKITMGYEGNIGGMERIQQLKENIKYFRRRLKEMGFIIYGNDFSPVIPVLLYMPAKVSAFSRFLLKKKISVVVVGFPATSLPEGRARFSMSSAHTREMLDTVLEVVDELGDLLNV 529
BLAST of FC930963 vs. ExPASy Swiss-Prot
Match: LCB2_SCHPO (Serine palmitoyltransferase 2 OS=Schizosaccharomyces pombe GN=lcb2 PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 9.226e-44 Identity = 89/222 (40.09%), Postives = 128/222 (57.66%), Query Frame = 1 Query: 1 SMEGELCKFPEXXXXXXXXXXXXXLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXXLLLARARICISASHTKEDLIKALEVISRVGDLVGINTS 666 SMEG C P+ +DEAHSIGA+G G G+C+ + T VDI+MGTFTKSFG+ GGYI+ + +I L+ T P ++YA S+SP QI S+ I+ +S G +++ R+ NS + R L+++GF + G++DSPV+P++LYNP KI AFS E L++ LL +R R C SASH K D+ L VG+ + + S Sbjct: 338 SMEGNFCDLPKVVELKNRYKFYLFIDEAHSIGAIGPRGGGICDYFGISTDHVDILMGTFTKSFGAAGGYISATPNIINKLRVTNPGYVYAESMSPAVLAQIKSSFLEIMDNSPTSAGLERIERLAFNSRYIRLGLKRLGFIIFGNDDSPVVPLLLYNPGKINAFSHEMLKRGIAVVVVGYPACPLLTSRVRFCFSASHNKADMDYFLRACDEVGEKLQLKFS 559
BLAST of FC930963 vs. ExPASy Swiss-Prot
Match: LCB2_KLULA (Serine palmitoyltransferase 2 OS=Kluyveromyces lactis GN=LCB2 PE=3 SV=2) HSP 1 Score: 168.703 bits (426), Expect = 2.513e-41 Identity = 89/222 (40.09%), Postives = 126/222 (56.76%), Query Frame = 1 Query: 1 SMEGELCKFPEXXXXXXXXXXXXXLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXXLLLARARICISASHTKEDLIKALEVISRVGDLVGINTS 666 SMEG + P+ +DEAHSIGA+G +GRGVC+ + +D+DIMMGT TKSFG+ GGYIA K +I + Y P QI S++K I G+ G ++L RI N+ + R LQ++GF V G DSPV+P++LY P+K+PAFSR L++ L+ +R R C+SA+ TKED+ L+ I+ VGD + + S Sbjct: 305 SMEGTMANLPKLVELKKKYKCYLFVDEAHSIGAMGPSGRGVCDFFGIPCSDIDIMMGTLTKSFGAAGGYIAADKWIIDRFRLDLTTPHYGEPTPAPVLAQIASSLKTITGDINPGEGQERLQRIAFNARYLRLALQRLGFIVYGIADSPVIPMLLYAPSKMPAFSRMMLQRKIAVVVVAYPATPLIESRVRFCVSAALTKEDIDYLLQHINEVGDKLFLKVS 526
BLAST of FC930963 vs. ExPASy Swiss-Prot
Match: BIKB_THEM4 (Putative 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=Tmel_1346 PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.528e-30 Identity = 75/219 (34.25%), Postives = 118/219 (53.88%), Query Frame = 1 Query: 1 SMEGELCKFPEXXXXXXXXXXXXXLDEAHSIGAVGKTGRGVCELLEVDTADVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAEQIISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLRQNXXXXXXXXXXXXLLLARARICISASHTKEDLIKALEVISRVGDLVGI 657 SM+G+L PE +D+AH G +G GRG+ + + VDI +GT +K+FG GGYIAG KELI YLK L+++ +SP + A K++ D +++ R+ +N+ +F+ E++K+GF+ G++++P+ P+MLY+ FS+E + AR R+ ISA HTKEDL ALE +VG +G+ Sbjct: 180 SMDGDLAPLPEIVELAEKYNAMVMVDDAHGEGVLGSHGRGIVDHFGLH-GRVDIEIGTLSKAFGVLGGYIAGKKELIDYLKQKARPFLFSSPLSPADTAAALEATKILQESD------ERVKRLWDNAKYFKEEMKKLGFDT-GESETPITPVMLYDAKLSTQFSKELFEEGIFAQSIGYPTVPKGKARIRVMISAVHTKEDLDFALEKFEKVGKKLGV 390 The following BLAST results are available for this feature:
BLAST of FC930963 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 227
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930963 ID=FC930963; Name=FC930963; organism=Citrus clementina; type=EST; length=677bpback to top |