FC930994
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930994 vs. ExPASy Swiss-Prot
Match: VATF_DICDI (V-type proton ATPase subunit F OS=Dictyostelium discoideum GN=vatF PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 5.849e-28 Identity = 61/110 (55.45%), Postives = 81/110 (73.64%), Query Frame = 1 Query: 22 TKLIAVIGDEDTVTGFILAGVGHRTAE-GTNFLVVKPSTPISAIEASFRTLSNRDDVAIILINQHVAEEIRHLLNTYDKTIPTVLEIPSKDSPYDPAKDYIMKRVNLMLG 348 T L+AVIGDED VTGF+LAGVG + + NFLVV T + IE +F++ + R+D+AII+I Q VA+EIR+L++ Y + IPT+LEIPSKD PYDP KD +M +V M G Sbjct: 9 TALVAVIGDEDVVTGFLLAGVGQKDKKKNENFLVVDSKTSQAKIETAFKSFTTRNDIAIIMITQKVADEIRYLIDEYHQVIPTILEIPSKDHPYDPKKDSVMLKVKKMTG 118
BLAST of FC930994 vs. ExPASy Swiss-Prot
Match: VATF_RAT (V-type proton ATPase subunit F OS=Rattus norvegicus GN=Atp6v1f PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 7.638e-28 Identity = 63/112 (56.25%), Postives = 80/112 (71.43%), Query Frame = 1 Query: 10 MSDGTKLIAVIGDEDTVTGFILAGVGHRTAEG-TNFLVVKPSTPISAIEASFRTLSNRDDVAIILINQHVAEEIRHLLNTYDKTIPTVLEIPSKDSPYDPAKDYIMKRVNLM 342 M+ KLIAVIGDEDTVTGF+L G+G NFLVV+ T I+ IE +FR NRDD+ IILINQ++AE +RH L+ + ++IP VLEIPSK+ PYD AKD I++R M Sbjct: 1 MAGRGKLIAVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQRSIPAVLEIPSKEHPYDAAKDSILRRAKGM 112
BLAST of FC930994 vs. ExPASy Swiss-Prot
Match: VATF_MOUSE (V-type proton ATPase subunit F OS=Mus musculus GN=Atp6v1f PE=1 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 7.638e-28 Identity = 63/112 (56.25%), Postives = 80/112 (71.43%), Query Frame = 1 Query: 10 MSDGTKLIAVIGDEDTVTGFILAGVGHRTAEG-TNFLVVKPSTPISAIEASFRTLSNRDDVAIILINQHVAEEIRHLLNTYDKTIPTVLEIPSKDSPYDPAKDYIMKRVNLM 342 M+ KLIAVIGDEDTVTGF+L G+G NFLVV+ T I+ IE +FR NRDD+ IILINQ++AE +RH L+ + ++IP VLEIPSK+ PYD AKD I++R M Sbjct: 1 MAGRGKLIAVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQRSIPAVLEIPSKEHPYDAAKDSILRRAKGM 112
BLAST of FC930994 vs. ExPASy Swiss-Prot
Match: VATF_BOVIN (V-type proton ATPase subunit F OS=Bos taurus GN=ATP6V1F PE=3 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 7.638e-28 Identity = 63/112 (56.25%), Postives = 80/112 (71.43%), Query Frame = 1 Query: 10 MSDGTKLIAVIGDEDTVTGFILAGVGHRTAEG-TNFLVVKPSTPISAIEASFRTLSNRDDVAIILINQHVAEEIRHLLNTYDKTIPTVLEIPSKDSPYDPAKDYIMKRVNLM 342 M+ KLIAVIGDEDTVTGF+L G+G NFLVV+ T I+ IE +FR NRDD+ IILINQ++AE +RH L+ + ++IP VLEIPSK+ PYD AKD I++R M Sbjct: 1 MAGRGKLIAVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQRSIPAVLEIPSKEHPYDAAKDSILRRARGM 112
BLAST of FC930994 vs. ExPASy Swiss-Prot
Match: VATF_HUMAN (V-type proton ATPase subunit F OS=Homo sapiens GN=ATP6V1F PE=1 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 9.976e-28 Identity = 63/112 (56.25%), Postives = 80/112 (71.43%), Query Frame = 1 Query: 10 MSDGTKLIAVIGDEDTVTGFILAGVGHRTAEG-TNFLVVKPSTPISAIEASFRTLSNRDDVAIILINQHVAEEIRHLLNTYDKTIPTVLEIPSKDSPYDPAKDYIMKRVNLM 342 M+ KLIAVIGDEDTVTGF+L G+G NFLVV+ T I+ IE +FR NRDD+ IILINQ++AE +RH L+ + ++IP VLEIPSK+ PYD AKD I++R M Sbjct: 1 MAGRGKLIAVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRQFLNRDDIGIILINQYIAEMVRHALDAHQQSIPAVLEIPSKEHPYDAAKDSILRRARGM 112
BLAST of FC930994 vs. ExPASy Swiss-Prot
Match: VATF_NEUCR (V-type proton ATPase subunit F OS=Neurospora crassa GN=vma-7 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.702e-27 Identity = 62/113 (54.87%), Postives = 81/113 (71.68%), Query Frame = 1 Query: 25 KLIAVIGDEDTVTGFILAGVGHRTA---EGTNFLVVKPSTPISAIEASF-RTLSNRDDVAIILINQHVAEEIRHLLNTYDKTIPTVLEIPSKDSPYDPAKDYIMKRVNLMLGE 351 + +AVIGDED+VTG +LAG+GH TA NFLVV T +AIEA+F R + R D+ I+LINQH+A+ IRH ++T+ PTVLEIPSKD PYDP KD +++RV + GE Sbjct: 12 QFLAVIGDEDSVTGLLLAGIGHVTAPPDSQKNFLVVDNKTDNAAIEAAFDRFTTERKDIGIVLINQHIADRIRHRVDTHTAAFPTVLEIPSKDHPYDPEKDSVLRRVRRLFGE 124
BLAST of FC930994 vs. ExPASy Swiss-Prot
Match: VATF_CAEEL (Probable V-type proton ATPase subunit F OS=Caenorhabditis elegans GN=vha-9 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.219e-25 Identity = 56/103 (54.37%), Postives = 75/103 (72.82%), Query Frame = 1 Query: 25 KLIAVIGDEDTVTGFILAGVGH-RTAEGTNFLVVKPSTPISAIEASFRTLSNRDDVAIILINQHVAEEIRHLLNTYDKTIPTVLEIPSKDSPYDPAKDYIMKR 330 K++AVIGDEDTV GF+L GVG A N+L+V T + IE +F RDD+AIILINQH+AE IR+ ++ + ++IP VLEIPSK++PYDP+KD I+ R Sbjct: 8 KILAVIGDEDTVVGFLLGGVGELNKARKPNYLIVDKQTTVQEIEEAFNGFCARDDIAIILINQHIAEMIRYAVDNHTQSIPAVLEIPSKEAPYDPSKDSILNR 110
BLAST of FC930994 vs. ExPASy Swiss-Prot
Match: VATF_XENLA (V-type proton ATPase subunit F (Fragment) OS=Xenopus laevis GN=atp6s14 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 3.548e-25 Identity = 57/103 (55.34%), Postives = 74/103 (71.84%), Query Frame = 1 Query: 37 VIGDEDTVTGFILAGVGHRTAEGT-NFLVVKPSTPISAIEASFRTLSNRDDVAIILINQHVAEEIRHLLNTYDKTIPTVLEIPSKDSPYDPAKDYIMKRVNLM 342 VIGDEDTVTGF+L G+G NFLVV+ T ++ IE +FR+ NRDD+ IILINQ +AE IRH+++T+ +IP VLEIPSK+ PYD KD I++R M Sbjct: 1 VIGDEDTVTGFLLGGIGELNKNRKPNFLVVEKETSVTEIEETFRSFLNRDDIGIILINQFIAEMIRHVIDTHTISIPAVLEIPSKEHPYDATKDSILRRAKGM 103
BLAST of FC930994 vs. ExPASy Swiss-Prot
Match: VATF_MANSE (V-type proton ATPase subunit F OS=Manduca sexta GN=VHA14 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 6.052e-25 Identity = 56/107 (52.34%), Postives = 75/107 (70.09%), Query Frame = 1 Query: 25 KLIAVIGDEDTVTGFILAGVGH-RTAEGTNFLVVKPSTPISAIEASFRTLSNRDDVAIILINQHVAEEIRHLLNTYDKTIPTVLEIPSKDSPYDPAKDYIMKRVNLM 342 KLI+VIGDEDT GF+L G+G NF+VV +TP+S IE F+ RDD+ IILINQ+VAE +RH+++ + +P+VLEIPSKD PYD +KD I++R M Sbjct: 10 KLISVIGDEDTCVGFLLGGIGEINKNRHPNFMVVDKNTPVSEIEECFKRFVKRDDIDIILINQNVAELVRHVIDAHTAPVPSVLEIPSKDHPYDASKDSILRRAKGM 116
BLAST of FC930994 vs. ExPASy Swiss-Prot
Match: VATF_ARATH (V-type proton ATPase subunit F OS=Arabidopsis thaliana GN=VHA-F PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 7.905e-25 Identity = 54/106 (50.94%), Postives = 77/106 (72.64%), Query Frame = 1 Query: 28 LIAVIGDEDTVTGFILAGVGH-RTAEGTNFLVVKPSTPISAIEASFRTLSNRDDVAIILINQHVAEEIRHLLNTYDKTIPTVLEIPSKDSPYDPAKDYIMKRVNLM 342 LIA+I DEDTV GF++AGVG+ TN+L+V T + IE +F+ S RDD+AIIL++Q++A IR L+++Y+K +P +LEIPSKD PYDPA D ++ RV + Sbjct: 14 LIAMIADEDTVVGFLMAGVGNVDIRRKTNYLIVDSKTTVRQIEDAFKEFSARDDIAIILLSQYIANMIRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYL 119 The following BLAST results are available for this feature:
BLAST of FC930994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930994 ID=FC930994; Name=FC930994; organism=Citrus clementina; type=EST; length=484bpback to top |